Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G052000 Glycine max HOM05D007641 ORTHO05D007630 0.0e+00 1561.6 798 100.0
Phvul.006G079400 Phaseolus vulgaris HOM05D007641 ORTHO05D007630 0.0e+00 1140.9 811 77.4
VMungo0540G0343 Vigna mungo HOM05D007641 ORTHO05D007630 2.0e-304 1048.9 816 71.9
Lj6g0005873 Lotus japonicus HOM05D007641 ORTHO05D007630 3.8e-263 911.8 802 64.5
Psat5g147960 Pisum sativum HOM05D007641 ORTHO05D007630 6.5e-247 857.8 808 60.6
Lalb_Chr18g0054201 Lupinus albus HOM05D007641 ORTHO05D007630 5.9e-232 808.1 720 62.9
TPR.G13882 Trifolium pratense HOM05D007641 ORTHO05D007630 4.4e-227 792.0 774 58.8
Medtr3g467390 Medicago truncatula HOM05D007641 ORTHO05D007630 1.7e-215 753.4 685 63.5
arahy.Tifrunner.gnm1.ann1.4PHV2I Arachis hypogaea HOM05D007641 ORTHO05D007630 6.3e-210 734.9 779 56.4
arahy.Tifrunner.gnm1.ann1.F8RHVN Arachis hypogaea HOM05D007641 ORTHO05D007630 1.1e-188 664.5 699 57.1
Ca_15060_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 2.3e-167 593.6 552 62.7
QL01p024477 Quercus lobata HOM05D007641 ORTHO05D007630 1.9e-89 334.7 831 36.0
RcHm_v2.0_Chr5g0073231 Rosa chinensis HOM05D007641 ORTHO05D007630 1.3e-85 322.0 849 33.9
Glyma.11G198150 Glycine max HOM05D007641 ORTHO05D007630 5.8e-78 296.6 234 68.4
Dinv28733 Davidia involucrata HOM05D007641 ORTHO05D007630 7.5e-78 296.2 858 33.1
Ca_15061_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 9.2e-68 262.7 292 52.1
Glyma.11G198000 Glycine max HOM05D007641 ORTHO05D007630 1.3e-66 258.8 175 81.1
FAN25G3378 Fragaria x ananassa HOM05D007641 ORTHO05D007630 1.7e-61 241.9 798 32.6
CiPaw.13G063300 Carya illinoinensis HOM05D007641 ORTHO05D007630 2.2e-61 241.5 798 33.0
Atru.chr10.2293 Acer truncatum HOM05D007641 ORTHO05D007630 8.4e-61 239.6 866 31.4
FvH4_3g40550 Fragaria vesca HOM05D007641 ORTHO05D007630 3.3e-57 227.6 781 31.6
FAN11G1956 Fragaria x ananassa HOM05D007641 ORTHO05D007630 2.0e-54 218.4 827 30.4
Sabra13G0126700 Salix brachista HOM05D007641 ORTHO05D002352 9.9e-54 216.1 849 30.7
Haze_24474 Corylus avellana HOM05D007641 ORTHO05D007630 3.8e-53 214.2 595 34.3
Manes.02G212232 Manihot esculenta HOM05D007641 ORTHO05D007630 1.2e-51 209.1 781 30.0
Actinidia34497 Actinidia chinensis HOM05D007641 ORTHO05D007630 2.1e-51 208.4 862 29.7
Potri.013G157800 Populus trichocarpa HOM05D007641 ORTHO05D007630 3.5e-51 207.6 857 30.8
Thecc.09G364100 Theobroma cacao HOM05D007641 ORTHO05D007630 6.0e-51 206.8 847 30.8
FAN16G1217 Fragaria x ananassa HOM05D007641 ORTHO05D007630 2.4e-47 194.9 780 30.1
Duzib168G1492 Durio zibethinus HOM05D007641 ORTHO05D007630 3.4e-46 191.0 848 30.0
CANSAT54G2173 Cannabis sativa HOM05D007641 ORTHO05D007630 2.9e-45 188.0 837 29.5
Prupe.6G040800 Prunus persica HOM05D007641 ORTHO05D007630 6.4e-45 186.8 831 29.8
Nn2g10289 Nelumbo nucifera HOM05D007641 ORTHO05D007630 8.7e-42 176.4 861 28.1
vmacro14640 Vaccinium macrocarpon HOM05D007641 ORTHO05D007630 1.1e-41 176.0 689 31.1
Aqoxy1G01263 Aquilegia oxysepala HOM05D007641 ORTHO05D007630 3.5e-35 154.5 788 26.6
Gorai.004G000600 Gossypium raimondii HOM05D007641 ORTHO05D007630 1.3e-34 152.5 781 26.9
Gohir.A08G000032 Gossypium hirsutum HOM05D007641 ORTHO05D007630 3.0e-34 151.4 785 28.0
Carub.0004s1164 Capsella rubella HOM05D001940 ORTHO05D007630 3.3e-33 147.9 764 27.4
Sp4g13010 Schrenkiella parvula HOM05D001940 ORTHO05D007630 9.6e-33 146.4 551 30.3
GSVIVG01024555001 Vitis vinifera HOM05D007641 ORTHO05D007630 1.6e-32 145.6 213 44.1
PSO170G4823 Papaver somniferum HOM05D007641 ORTHO05D007630 3.1e-31 141.4 390 33.1
Sed0007856 Sechium edule HOM05D007641 ORTHO05D007630 7.6e-30 136.7 851 26.9
ClCG02G019020 Citrullus lanatus HOM05D007641 ORTHO05D007630 1.1e-28 132.9 829 27.1
Rhsim01G0243500 Rhododendron simsii HOM05D007641 ORTHO05D007630 2.5e-28 131.7 727 26.3
Gohir.D08G007350 Gossypium hirsutum HOM05D007641 ORTHO05D007630 3.2e-28 131.3 784 26.5
AL4G25360 Arabidopsis lyrata HOM05D001940 ORTHO05D007630 2.7e-27 128.3 501 30.1
TWI79G1607 Tripterygium wilfordii HOM05D007641 ORTHO05D007630 3.5e-27 127.9 785 26.5
Cpa.g.sc2.293 Carica papaya HOM05D007641 ORTHO05D007630 4.6e-27 127.5 339 34.8
MELO3C019578.2 Cucumis melo HOM05D007641 ORTHO05D007630 1.8e-26 125.6 853 27.8
AT2G30480 Arabidopsis thaliana HOM05D001940 ORTHO05D007630 1.9e-25 122.1 502 29.1
CsaV3_6G013130 Cucumis sativus L. HOM05D007641 ORTHO05D007630 1.6e-24 119.0 840 27.4
Migut.D00817 Erythranthe guttata HOM05D007641 ORTHO05D007630 8.2e-24 116.7 465 30.1
Sopen09g001120 Solanum pennellii HOM05D014625 ORTHO05D007630 2.4e-23 115.2 884 25.1
Ciclev10004023m.g Citrus clementina HOM05D007641 ORTHO05D007630 1.2e-22 112.8 337 32.3
Solyc09g005140.2 Solanum lycopersicum HOM05D014625 ORTHO05D007630 2.6e-22 111.7 884 25.1
Hma1.2p1_0119F.1_g056956 Hydrangea macrophylla HOM05D007641 ORTHO05D007630 3.4e-22 111.3 523 27.7
PSO017G1347 Papaver somniferum HOM05D007641 ORTHO05D007630 3.8e-21 107.8 390 29.5
Os01g0167700 Oryza sativa ssp. japonica HOM05D052079 ORTHO05D007630 5.0e-21 107.5 738 24.8
MBI15_g36478_MAGBIO Magnolia biondii HOM05D007641 ORTHO05D007630 6.5e-21 107.1 701 26.4
THA.LOC104815825 Tarenaya hassleriana HOM05D001940 ORTHO05D007630 1.1e-20 106.3 499 28.3
HanXRQChr08g0230341 Helianthus annuus HOM05D007641 ORTHO05D007630 2.7e-19 101.7 437 29.3
Hund18459 Selenicereus undatus HOM05D029401 ORTHO05D007630 3.6e-19 101.3 855 26.4
Sc23g0005090 Simmondsia chinensis HOM05D007641 ORTHO05D007630 1.0e-18 99.8 765 24.8
COL.COLO4_11217 Corchorus olitorius HOM05D007641 ORTHO05D007630 3.0e-18 98.2 690 25.2
SGA_v2.0_scaffold20G09288 Striga asiatica HOM05D007641 ORTHO05D007630 3.9e-18 97.8 339 31.3
Lalb_Chr18g0054191 Lupinus albus HOM05D007641 ORTHO05D007630 5.1e-18 97.4 67 74.6
BcaB02g10326 Brassica carinata HOM05D001940 ORTHO05D007630 6.7e-18 97.1 458 27.7
Gohir.D12G000401 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.1e-17 96.3 687 25.9
BcaC02g11137 Brassica carinata HOM05D001940 ORTHO05D007630 1.5e-17 95.9 444 28.4
MD11G1053300 Malus domestica HOM05D007641 ORTHO05D007630 1.5e-17 95.9 315 31.4
HPP92_015425 Vanilla planifolia HOM05D007641 ORTHO05D007630 3.3e-17 94.7 850 25.1
BolC4t23545H Brassica oleracea HOM05D001940 ORTHO05D007630 7.4e-17 93.6 333 30.6
C04p20070 Brassica napus HOM05D001940 ORTHO05D007630 1.3e-16 92.8 354 29.9
Oeu064683.1 Olea europaea HOM05D007641 ORTHO05D007630 1.3e-16 92.8 371 28.8
Peaxi162Scf00605g00515 Petunia axillaris HOM05D014625 ORTHO05D007630 6.3e-16 90.5 350 28.0
TAR633G1590 Trochodendron aralioides HOM05D007641 ORTHO05D007630 1.4e-15 89.4 444 29.1
Ah.08g218910 Amaranthus hybridus HOM05D000020 ORTHO05D002192 4.1e-15 87.8 334 28.1
TAR636G3352 Trochodendron aralioides HOM05D007641 ORTHO05D007630 5.3e-15 87.4 188 37.2
Ca_22416_v3 Cicer arietinum L. HOM05D007641 ORTHO05D007630 2.0e-14 85.5 64 65.6
A05p14980 Brassica napus HOM05D001940 ORTHO05D007630 1.9e-12 79.0 450 28.0
BraA05t20424Z Brassica rapa HOM05D001940 ORTHO05D007630 1.9e-12 79.0 333 29.1
Gorai.002G184200 Gossypium raimondii HOM05D007641 ORTHO05D007630 2.5e-12 78.6 179 30.7
Ciclev10001550m.g Citrus clementina HOM05D007641 ORTHO05D007630 1.2e-11 76.3 346 31.5
Lsat_1_v5_gn_9_13760 Lactuca sativa HOM05D007641 ORTHO05D007630 1.2e-11 76.3 223 31.8
ATR1127G234 Amborella trichopoda HOM05D007641 ORTHO05D007630 1.6e-11 75.9 236 28.4
Gorai.012G000300 Gossypium raimondii HOM05D007641 ORTHO05D007630 2.1e-11 75.5 548 26.1
FAN21G1070 Fragaria x ananassa HOM05D007641 ORTHO05D007630 4.7e-11 74.3 323 29.7
PGR102G3245 Punica granatum HOM05D007641 ORTHO05D007630 6.1e-11 73.9 396 27.3
Gohir.1Z049529 Gossypium hirsutum HOM05D007641 ORTHO05D007630 7.9e-11 73.6 456 26.3
Zm00001eb336420 Zea mays HOM05D052079 ORTHO05D007630 7.9e-11 73.6 226 31.4
Nitab4.5_0001868g0030 Nicotiana tabacum HOM05D014625 ORTHO05D007630 1.8e-10 72.4 201 32.8
ECA247G3209 Erigeron canadensis HOM05D007641 ORTHO05D007630 3.9e-10 71.2 659 24.4
AUR62001158 Chenopodium quinoa HOM05D029401 ORTHO05D007630 6.7e-10 70.5 745 23.0
CARHR123930 Cardamine hirsuta HOM05D001940 ORTHO05D007630 1.1e-09 69.7 217 31.8
Thhalv10017756m.g Eutrema salsugineum HOM05D001940 ORTHO05D007630 9.7e-09 66.6 288 25.3
PSO384G0550 Papaver somniferum HOM05D007641 ORTHO05D007630 1.4e-07 62.8 54 55.6
CSS0002773 Camellia sinensis var. sinensis HOM05D024992 ORTHO05D022110 1.8e-07 62.4 105 42.9
DCAR_018642 Daucus carota HOM05D007641 ORTHO05D007630 1.2e-06 59.7 128 32.8


User provided reference genes

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