Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G044800 Glycine max HOM05D010448 ORTHO05D012537 6.5e-226 786.9 371 100.0
Glyma.11G210008 Glycine max HOM05D010448 ORTHO05D012537 7.8e-187 657.1 373 83.9
Phvul.006G086200 Phaseolus vulgaris HOM05D010448 ORTHO05D012537 1.1e-153 547.0 373 70.8
VMungo0540G1047 Vigna mungo HOM05D010448 ORTHO05D012537 1.3e-149 533.5 372 69.4
Lj6g0025570 Lotus japonicus HOM05D010448 ORTHO05D012537 9.7e-145 517.3 379 66.0
Lalb_Chr18g0053761 Lupinus albus HOM05D010448 ORTHO05D012537 2.0e-137 493.0 363 65.0
arahy.Tifrunner.gnm1.ann1.4R5R47 Arachis hypogaea HOM05D010448 ORTHO05D012537 2.5e-132 476.1 371 63.9
Medtr3g064460 Medicago truncatula HOM05D010448 ORTHO05D012537 3.0e-130 469.2 380 62.1
Psat5g142640 Pisum sativum HOM05D010448 ORTHO05D012537 4.1e-111 405.6 380 55.5
TPR.G18483 Trifolium pratense HOM05D010448 ORTHO05D012537 7.0e-111 404.8 348 59.5
Potri.001G146000 Populus trichocarpa HOM05D010448 ORTHO05D012537 1.0e-90 337.8 356 46.9
Potri.001G181000 Populus trichocarpa HOM05D010448 ORTHO05D012537 9.8e-89 331.3 357 46.2
Sabra01G0146000 Salix brachista HOM05D010448 ORTHO05D012537 9.2e-87 324.7 357 45.9
Manes.18G108700 Manihot esculenta HOM05D010448 ORTHO05D012537 3.3e-84 316.2 326 47.2
Sabra01G0114700 Salix brachista HOM05D010448 ORTHO05D012537 8.1e-83 311.6 358 44.7
Atru.chr6.2743 Acer truncatum HOM05D010448 ORTHO05D012537 2.1e-67 260.4 378 37.6
Eucgr.G01906 Eucalyptus grandis HOM05D010448 ORTHO05D012537 6.9e-58 228.8 406 32.8
Ciclev10015844m.g Citrus clementina HOM05D010448 ORTHO05D012537 9.9e-57 224.9 343 36.7
Atru.chr13.2066 Acer truncatum HOM05D010448 ORTHO05D012537 1.2e-17 95.1 123 42.3
MBI07_g31506_MAGBIO Magnolia biondii HOM05D010448 ORTHO05D012537 6.1e-14 82.8 285 26.0
COL.COLO4_26298 Corchorus olitorius HOM05D015450 ORTHO05D017757 2.6e-12 77.4 237 26.6
SGA_v2.0_scaffold136G35021 Striga asiatica HOM05D000664 ORTHO05D000491 5.7e-12 76.3 285 25.3
Sabra08G0010200 Salix brachista HOM05D008040 ORTHO05D010075 1.1e-10 72.0 258 26.7
Cc02_g04650 Coffea canephora HOM05D000664 ORTHO05D000491 1.0e-08 65.5 278 22.3
Duzib170G0599 Durio zibethinus HOM05D001729 ORTHO05D001155 2.2e-08 64.3 122 31.1
Sabra09G0127200 Salix brachista HOM05D001729 ORTHO05D001155 2.2e-08 64.3 151 30.5
CARHR286570 Cardamine hirsuta HOM05D002743 ORTHO05D002895 6.5e-08 62.8 211 26.5
Lsat_1_v5_gn_4_180620 Lactuca sativa HOM05D008898 ORTHO05D001155 1.1e-07 62.0 128 32.0
CAN.G1110.53 Capsicum annuum HOM05D001729 ORTHO05D001155 1.5e-07 61.6 280 27.5
Gorai.006G112800 Gossypium raimondii HOM05D001729 ORTHO05D001155 4.2e-07 60.1 264 24.2
Gohir.D09G096101 Gossypium hirsutum HOM05D001729 ORTHO05D001155 7.2e-07 59.3 265 24.5
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 9.4e-07 58.9 121 30.6
Rhsim10G0101800 Rhododendron simsii HOM05D015241 ORTHO05D020831 1.6e-06 58.2 148 29.7
Sabra08G0010400 Salix brachista HOM05D008040 ORTHO05D010075 4.7e-06 56.6 84 40.5


User provided reference genes

Program Settings