Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 1.0e-257 892.9 439 100.0
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 6.8e-230 800.4 417 94.0
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 1.1e-208 729.9 401 88.8
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 4.4e-189 664.8 409 80.2
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 5.8e-189 664.5 404 80.4
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 4.9e-188 661.4 408 79.9
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 3.0e-185 652.1 404 79.2
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 1.1e-182 643.7 408 77.7
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 4.4e-181 638.3 405 78.0
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 1.4e-174 616.7 371 82.2
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 2.2e-156 556.2 407 68.3
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 1.8e-153 546.6 378 70.1
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 2.3e-153 546.2 413 66.6
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 2.3e-153 546.2 396 68.4
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 5.1e-153 545.0 399 66.4
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 8.7e-153 544.3 308 86.4
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 2.5e-152 542.7 401 66.3
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 9.7e-152 540.8 378 67.7
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 1.3e-151 540.4 391 66.5
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.8e-151 539.3 415 64.3
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 1.8e-150 536.6 393 66.2
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 9.0e-150 534.3 414 64.7
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 2.6e-149 532.7 399 66.2
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 2.6e-149 532.7 392 65.8
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 7.7e-149 531.2 399 65.4
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 7.7e-149 531.2 378 67.2
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 2.9e-148 529.3 393 65.9
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 1.1e-147 527.3 406 64.5
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 1.9e-147 526.6 396 64.6
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 3.2e-147 525.8 431 61.5
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 7.2e-147 524.6 408 64.2
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 9.4e-147 524.2 376 67.0
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 2.1e-146 523.1 373 67.8
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 7.9e-146 521.2 389 66.8
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 7.4e-144 514.6 413 61.0
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 7.4e-144 514.6 400 63.0
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 3.7e-143 512.3 383 64.2
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 3.7e-143 512.3 410 63.7
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 4.8e-143 511.9 407 63.4
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.8e-142 510.0 397 63.2
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 1.2e-141 507.3 407 60.0
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.2e-141 507.3 397 62.7
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 3.4e-141 505.8 391 63.4
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 1.7e-140 503.4 414 61.6
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 2.2e-140 503.1 415 61.7
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 2.2e-140 503.1 434 59.4
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 2.9e-140 502.7 391 62.4
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 6.5e-140 501.5 399 60.9
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 1.4e-139 500.4 408 61.3
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.9e-139 500.0 408 61.3
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 3.2e-139 499.2 413 60.8
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 4.2e-139 498.8 401 61.6
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 5.5e-139 498.4 415 60.7
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 7.9e-138 494.6 413 61.5
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 6.7e-137 491.5 388 63.1
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 3.7e-135 485.7 375 61.1
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 2.4e-134 483.0 417 60.7
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 9.1e-134 481.1 401 59.9
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.2e-133 480.7 417 60.4
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.2e-133 480.7 417 60.4
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 2.0e-133 479.9 405 60.5
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 2.6e-133 479.6 387 63.0
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 1.7e-132 476.9 390 63.3
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 6.5e-132 474.9 406 59.9
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 2.5e-131 473.0 458 54.4
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 3.2e-131 472.6 398 58.0
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 4.2e-131 472.2 389 59.4
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 2.7e-130 469.5 369 64.0
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 4.7e-130 468.8 454 56.2
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 1.8e-129 466.8 363 63.1
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.5e-128 463.8 400 59.0
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 3.3e-128 462.6 370 61.9
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 4.4e-128 462.2 380 58.9
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 3.1e-126 456.1 413 57.1
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 4.5e-125 452.2 333 64.0
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 1.0e-124 451.1 405 54.8
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 3.4e-120 436.0 443 53.5
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 2.7e-117 426.4 311 66.6
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.9e-117 425.2 295 67.8
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 1.0e-116 424.5 377 58.4
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 7.2e-115 418.3 400 54.2
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.2e-114 417.5 376 55.9
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 7.0e-110 401.7 399 51.6
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 5.9e-109 398.7 305 62.6
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 2.5e-107 393.3 287 63.8
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 2.7e-101 373.2 284 61.6
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 2.0e-93 347.1 291 60.1
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 3.5e-93 346.3 309 54.7
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 7.1e-86 322.0 231 67.1
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 4.3e-83 312.8 297 53.9
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 2.3e-81 307.0 239 64.0
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 1.2e-80 304.7 393 43.5
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 5.4e-78 295.8 254 61.4
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 1.2e-77 294.7 186 79.0
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 6.2e-74 282.3 281 54.4
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 1.8e-65 254.2 217 59.0
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 2.6e-64 250.4 374 38.0
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 6.2e-58 229.2 201 58.2
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 5.1e-52 209.5 158 64.6
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 5.1e-44 183.0 390 34.1
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 6.7e-44 182.6 157 54.8
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 4.1e-41 173.3 100 82.0
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 3.5e-37 160.2 148 55.4
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 5.7e-35 152.9 148 50.7
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 7.2e-30 136.0 108 65.7
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 2.6e-24 117.5 83 67.5
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 4.2e-22 110.2 360 28.6
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 6.1e-21 106.3 70 67.1
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 5.1e-20 103.2 391 28.6
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 1.7e-18 98.2 74 68.9
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 4.8e-18 96.7 382 25.1
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 1.2e-16 92.0 75 54.7
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 2.9e-15 87.4 433 25.4
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 1.1e-11 75.5 66 59.1
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 1.1e-11 75.5 64 59.4
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.1e-09 68.9 71 42.3
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 2.4e-09 67.8 77 46.8
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 9.1e-09 65.9 68 47.1


User provided reference genes

Program Settings