Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 5.1e-246 854.0 431 100.0
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 2.2e-209 732.3 436 83.9
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 1.6e-199 699.5 436 81.9
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 9.7e-181 637.1 451 74.1
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 9.7e-181 637.1 429 74.1
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 9.1e-179 630.6 439 73.1
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 1.7e-177 626.3 437 72.3
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 8.5e-177 624.0 452 72.1
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 8.3e-172 607.4 450 70.0
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 5.7e-157 558.1 462 63.9
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 1.7e-145 520.0 436 62.6
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 5.0e-145 518.5 434 62.2
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 4.0e-142 508.8 441 60.3
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 5.8e-141 505.0 439 59.5
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 7.5e-141 504.6 410 62.7
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 3.7e-140 502.3 433 60.7
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 1.9e-139 500.0 396 63.6
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 3.2e-139 499.2 431 60.6
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 7.0e-139 498.0 396 63.4
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 9.2e-139 497.7 408 60.5
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 2.7e-138 496.1 433 59.8
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 3.5e-138 495.7 395 62.5
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 4.6e-138 495.4 395 63.0
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 1.1e-136 490.7 438 58.2
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 9.5e-136 487.6 430 59.3
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 9.5e-136 487.6 447 58.8
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 1.2e-135 487.3 424 59.0
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.1e-134 484.2 411 60.3
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 1.1e-134 484.2 424 59.0
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 5.2e-134 481.9 424 59.9
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 4.4e-133 478.8 423 60.0
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 5.8e-133 478.4 423 60.0
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 7.5e-133 478.0 410 58.3
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 7.5e-133 478.0 410 58.3
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 7.5e-133 478.0 410 58.3
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 3.7e-132 475.7 436 56.0
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.1e-131 474.2 426 58.2
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 5.4e-131 471.9 421 58.9
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 1.6e-130 470.3 409 58.7
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 4.6e-130 468.8 437 55.1
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 7.8e-130 468.0 414 57.5
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 1.7e-129 466.8 417 58.5
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 2.3e-129 466.5 411 56.4
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 1.1e-128 464.2 404 57.4
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 5.6e-128 461.8 454 55.7
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 1.2e-127 460.7 411 56.0
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 2.1e-127 459.9 437 55.8
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 4.7e-127 458.8 404 56.7
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 4.7e-127 458.8 443 54.2
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 3.1e-126 456.1 415 56.1
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 4.0e-126 455.7 414 56.0
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 4.0e-126 455.7 417 58.0
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 1.2e-125 454.1 404 57.2
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 1.5e-125 453.8 430 55.3
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 1.5e-125 453.8 429 57.1
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 2.0e-125 453.4 306 70.9
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 5.8e-125 451.8 423 55.1
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 7.6e-125 451.4 445 55.1
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 3.8e-124 449.1 416 55.8
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 6.4e-124 448.4 423 55.1
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 5.4e-123 445.3 437 54.7
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 4.6e-122 442.2 395 57.5
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 6.0e-122 441.8 412 56.6
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 8.7e-121 438.0 471 51.0
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 4.3e-120 435.6 418 55.0
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 8.1e-119 431.4 438 55.7
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 3.1e-118 429.5 408 54.4
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 3.1e-118 429.5 418 53.3
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 2.0e-117 426.8 402 54.7
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 2.6e-117 426.4 414 53.6
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 5.8e-117 425.2 418 53.3
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 9.9e-117 424.5 418 53.6
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 2.9e-116 422.9 404 54.0
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 2.9e-116 422.9 408 53.4
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 4.9e-116 422.2 404 53.7
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 6.4e-116 421.8 414 53.1
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 5.4e-115 418.7 483 51.6
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 1.6e-114 417.2 415 52.5
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 1.3e-113 414.1 427 52.5
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 3.0e-113 412.9 408 53.2
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 1.1e-112 411.0 419 52.3
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 1.5e-112 410.6 447 51.7
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 4.3e-112 409.1 408 52.5
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 1.3e-111 407.5 407 53.3
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.8e-111 405.6 417 54.4
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 5.8e-109 398.7 405 52.8
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 2.9e-108 396.4 294 63.9
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 1.4e-107 394.0 416 51.4
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 2.1e-106 390.2 360 58.1
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 1.1e-104 384.4 445 50.6
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 2.5e-104 383.3 355 54.6
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 1.1e-102 377.9 399 51.9
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 9.0e-102 374.8 410 47.6
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 1.2e-101 374.4 409 48.4
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 1.2e-98 364.4 428 47.0
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 1.2e-98 364.4 404 46.8
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 1.2e-93 347.8 440 45.5
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.8e-87 325.9 305 58.4
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 3.6e-82 309.7 322 51.6
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 2.2e-76 290.4 421 38.2
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 3.6e-66 256.5 430 40.0
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 1.0e-57 228.4 262 49.2
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 2.6e-56 223.8 255 49.4
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 2.4e-54 217.2 356 40.2
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 4.1e-54 216.5 166 62.7
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 2.1e-50 204.1 153 64.7
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 4.7e-50 203.0 331 38.4
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 1.2e-48 198.4 371 34.8
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 1.2e-48 198.4 146 63.7
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 3.7e-47 193.4 297 38.0
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 7.2e-43 179.1 321 32.7
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 5.2e-41 172.9 356 31.2
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 1.5e-40 171.4 217 48.8
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 1.2e-37 161.8 146 56.8
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 1.6e-37 161.4 144 52.1
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 2.6e-32 144.1 160 48.1
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 3.7e-31 140.2 159 45.9
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 1.9e-27 127.9 337 26.7
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 2.6e-16 90.9 253 23.3
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 9.9e-16 89.0 60 65.0
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 1.3e-15 88.6 60 66.7
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 2.3e-12 77.8 106 41.5
PRCOL_00002967 Prasinoderma coloniale HOM05D006228 ORTHO05D007847 5.8e-08 63.2 159 25.8


User provided reference genes

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