Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 2.4e-167 592.0 283 100.0
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 6.2e-144 514.2 280 86.4
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 3.1e-135 485.3 283 78.4
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 8.5e-133 477.2 285 78.2
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 1.5e-129 466.5 273 78.8
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 4.3e-129 464.9 279 78.1
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 4.7e-115 418.3 380 56.6
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 6.7e-114 414.5 332 60.8
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 5.3e-111 404.8 212 91.0
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 1.2e-110 403.7 266 67.7
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 1.3e-109 400.2 339 64.9
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 3.8e-109 398.7 276 65.6
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 8.5e-109 397.5 258 70.5
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 1.1e-108 397.1 267 66.3
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 1.5e-108 396.7 276 64.9
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 4.2e-108 395.2 275 63.3
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 1.6e-107 393.3 261 67.0
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 8.0e-107 391.0 275 63.3
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 4.0e-106 388.7 276 63.4
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 1.7e-104 383.3 276 62.3
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 1.7e-104 383.3 273 64.1
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 4.8e-104 381.7 275 62.5
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 8.2e-104 380.9 272 63.2
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 4.1e-103 378.6 273 63.4
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 9.1e-103 377.5 252 69.0
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 9.1e-103 377.5 273 63.4
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 3.5e-102 375.6 271 62.4
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 7.7e-102 374.4 267 61.4
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 7.7e-102 374.4 258 65.5
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 1.0e-101 374.0 293 59.4
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 2.2e-101 372.9 273 62.6
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 2.2e-101 372.9 266 63.2
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 2.9e-101 372.5 281 60.9
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 2.9e-101 372.5 254 66.9
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 2.9e-101 372.5 272 61.8
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 5.0e-101 371.7 273 62.6
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 5.0e-101 371.7 293 59.0
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 6.5e-101 371.3 268 63.4
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 8.5e-101 370.9 253 61.7
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 1.1e-100 370.5 276 60.1
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 1.1e-100 370.5 276 60.9
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 1.5e-100 370.2 274 61.7
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 4.2e-100 368.6 257 66.1
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 1.2e-99 367.1 202 80.7
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.6e-99 366.7 283 61.5
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.7e-99 365.9 259 64.5
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 3.6e-99 365.5 280 60.7
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 1.0e-98 364.0 272 62.1
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 1.4e-98 363.6 273 62.3
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 2.6e-97 359.4 241 65.6
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 2.8e-96 355.9 273 60.4
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 4.8e-96 355.1 285 62.5
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 2.4e-95 352.8 329 53.2
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 1.2e-94 350.5 293 56.0
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 1.6e-94 350.1 275 58.5
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 4.5e-94 348.6 277 57.8
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 1.3e-93 347.1 273 59.7
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 2.3e-93 346.3 262 61.1
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 6.5e-93 344.7 269 57.6
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 1.5e-92 343.6 277 57.0
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 1.9e-92 343.2 295 55.9
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 2.5e-92 342.8 227 68.7
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 9.5e-92 340.9 273 57.5
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 9.5e-92 340.9 276 56.5
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 1.6e-91 340.1 275 57.5
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 3.6e-91 339.0 268 57.5
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 4.7e-91 338.6 269 57.6
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 1.8e-90 336.7 333 48.6
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 3.0e-90 335.9 276 57.6
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 4.0e-90 335.5 267 57.7
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.6e-89 332.8 276 58.3
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 4.4e-89 332.0 278 53.6
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 8.3e-88 327.8 250 57.6
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 1.8e-87 326.6 267 55.8
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.8e-87 326.6 283 57.2
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 2.4e-87 326.2 255 57.6
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 2.7e-86 322.8 251 58.6
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 4.5e-86 322.0 268 55.6
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 4.5e-86 322.0 281 53.4
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 3.8e-85 318.9 255 56.5
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 5.0e-85 318.5 289 51.2
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 1.2e-83 313.9 280 52.9
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 4.7e-83 312.0 268 56.3
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 5.2e-82 308.5 207 67.6
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 5.8e-81 305.1 206 67.0
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 6.4e-80 301.6 235 55.7
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 1.8e-79 300.1 245 56.3
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.8e-79 300.1 207 67.1
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 3.2e-79 299.3 202 66.8
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 1.0e-77 294.3 237 56.5
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 5.0e-77 292.0 202 65.8
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 1.5e-76 290.4 248 53.2
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.2e-75 287.3 200 62.5
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 2.8e-75 286.2 270 53.0
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 6.2e-75 285.0 200 61.5
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 6.8e-74 281.6 247 53.0
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 3.4e-73 279.3 219 58.4
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 1.6e-70 270.4 193 61.1
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 1.0e-69 267.7 188 66.0
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 1.5e-68 263.8 210 57.1
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 2.5e-60 236.5 362 36.2
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 1.2e-59 234.2 180 59.4
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 5.2e-58 228.8 266 42.1
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 4.9e-56 222.2 187 52.4
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 1.9e-55 220.3 200 52.0
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 2.1e-54 216.9 225 47.6
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 9.6e-52 208.0 281 37.4
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 8.1e-51 204.9 258 39.9
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 1.5e-41 174.1 179 46.9
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 1.5e-41 174.1 133 56.4
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 3.1e-34 149.8 179 41.9
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 5.3e-34 149.1 194 36.6
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 1.5e-28 131.0 149 45.6
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 1.8e-26 124.0 132 47.7
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 1.5e-25 120.9 150 40.7
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 1.4e-23 114.4 92 62.0
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 9.3e-23 111.7 246 30.9
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 2.2e-19 100.5 158 37.3
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 2.5e-12 77.0 57 52.6
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 6.9e-10 68.9 73 46.6


User provided reference genes

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