Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G020100 Glycine max HOM05D004698 ORTHO05D005699 1.9e-110 402.5 201 100.0
Glyma.20G247000 Glycine max HOM05D004698 ORTHO05D005699 2.0e-67 259.6 198 73.7
VMungo0720G2032 Vigna mungo HOM05D004698 ORTHO05D005699 1.0e-63 247.3 195 70.3
Phvul.007G003200 Phaseolus vulgaris HOM05D004698 ORTHO05D005699 8.6e-63 244.2 195 69.7
Lj5g0001870 Lotus japonicus HOM05D004698 ORTHO05D005699 2.8e-58 229.2 196 66.3
Lalb_Chr06g0164501 Lupinus albus HOM05D004698 ORTHO05D005699 2.7e-56 222.6 203 62.1
Ca_11410_v3 Cicer arietinum L. HOM05D004698 ORTHO05D005699 1.0e-55 220.7 202 61.9
Lalb_Chr02g0144411 Lupinus albus HOM05D004698 ORTHO05D005699 8.6e-55 217.6 203 61.1
TPR.G32598 Trifolium pratense HOM05D004698 ORTHO05D005699 1.1e-54 217.2 203 59.6
Medtr8g092560 Medicago truncatula HOM05D004698 ORTHO05D005699 6.1e-53 211.5 193 61.7
QL01p009119 Quercus lobata HOM05D004698 ORTHO05D005699 8.0e-53 211.1 195 59.5
Thecc.09G219100 Theobroma cacao HOM05D004698 ORTHO05D005699 8.0e-53 211.1 195 60.0
Cfa009658 Carpinus fangiana HOM05D004698 ORTHO05D005699 1.8e-52 209.9 196 58.7
MD03G1018500 Malus domestica HOM05D004698 ORTHO05D005699 4.0e-52 208.8 203 56.2
arahy.Tifrunner.gnm1.ann1.5V818H Arachis hypogaea HOM05D004698 ORTHO05D005699 5.2e-52 208.4 190 62.1
arahy.Tifrunner.gnm1.ann1.Y8WF3A Arachis hypogaea HOM05D004698 ORTHO05D005699 5.2e-52 208.4 190 62.1
DCAR_003213 Daucus carota HOM05D004698 ORTHO05D005699 5.2e-52 208.4 196 57.7
Atru.chr3.2431 Acer truncatum HOM05D004698 ORTHO05D005699 3.4e-51 205.7 196 59.7
Atru.chr3.2436 Acer truncatum HOM05D004698 ORTHO05D005699 5.8e-51 204.9 196 59.2
Eucgr.B03647 Eucalyptus grandis HOM05D004698 ORTHO05D005699 5.8e-51 204.9 204 54.9
Prupe.6G018000 Prunus persica HOM05D004698 ORTHO05D005699 7.5e-51 204.5 192 58.3
Ah.06g193310 Amaranthus hybridus HOM05D004698 ORTHO05D005699 1.7e-50 203.4 193 55.4
AUR62000051 Chenopodium quinoa HOM05D004698 ORTHO05D005699 2.2e-50 203.0 193 56.5
MELO3C015673.2 Cucumis melo HOM05D004698 ORTHO05D005699 2.9e-50 202.6 191 57.6
Sc09g0000410 Simmondsia chinensis HOM05D004698 ORTHO05D005699 2.9e-50 202.6 203 55.2
CsaV3_1G042380 Cucumis sativus L. HOM05D004698 ORTHO05D005699 8.3e-50 201.1 191 57.1
Duzib168G2110 Durio zibethinus HOM05D004698 ORTHO05D005699 8.3e-50 201.1 196 56.6
Gohir.D05G069500 Gossypium hirsutum HOM05D004698 ORTHO05D005699 8.3e-50 201.1 202 56.9
Gorai.009G070500 Gossypium raimondii HOM05D004698 ORTHO05D005699 8.3e-50 201.1 202 56.9
Manes.14G015500 Manihot esculenta HOM05D004698 ORTHO05D005699 1.1e-49 200.7 196 56.1
RcHm_v2.0_Chr5g0080391 Rosa chinensis HOM05D004698 ORTHO05D005699 1.1e-49 200.7 220 53.2
PGR102G0099 Punica granatum HOM05D004698 ORTHO05D005699 1.4e-49 200.3 193 58.0
Hund21659 Selenicereus undatus HOM05D004698 ORTHO05D005699 1.4e-49 200.3 194 55.2
Migut.K00041 Erythranthe guttata HOM05D004698 ORTHO05D005699 1.9e-49 199.9 195 56.4
Ciclev10016541m.g Citrus clementina HOM05D004698 ORTHO05D005699 2.4e-49 199.5 191 57.6
Duzib150G1219 Durio zibethinus HOM05D004698 ORTHO05D005699 3.2e-49 199.1 196 56.6
Dinv08060 Davidia involucrata HOM05D004698 ORTHO05D005699 4.1e-49 198.7 199 55.8
THA.LOC104811123 Tarenaya hassleriana HOM05D004698 ORTHO05D005699 4.1e-49 198.7 196 54.6
Nn2g15650 Nelumbo nucifera HOM05D004698 ORTHO05D005699 5.4e-49 198.4 197 54.3
PSO339G6590 Papaver somniferum HOM05D004698 ORTHO05D005699 5.4e-49 198.4 191 57.1
Sed0023233 Sechium edule HOM05D004698 ORTHO05D005699 5.4e-49 198.4 198 56.1
Aa31LG7G13160 Aethionema arabicum HOM05D004698 ORTHO05D005699 9.2e-49 197.6 226 49.6
EL10Ac4g10324 Beta vulgaris HOM05D004698 ORTHO05D005699 9.2e-49 197.6 193 54.9
TAR633G2590 Trochodendron aralioides HOM05D004698 ORTHO05D005699 9.2e-49 197.6 196 57.1
Aqoxy1G00174 Aquilegia oxysepala HOM05D004698 ORTHO05D005699 1.2e-48 197.2 196 55.6
Hund07554 Selenicereus undatus HOM05D004698 ORTHO05D005699 1.2e-48 197.2 195 54.9
Sp6g24760 Schrenkiella parvula HOM05D004698 ORTHO05D005699 3.5e-48 195.7 203 53.2
Thhalv10014585m.g Eutrema salsugineum HOM05D004698 ORTHO05D005699 4.6e-48 195.3 193 56.0
FvH4_3g44090 Fragaria vesca HOM05D004698 ORTHO05D005699 4.6e-48 195.3 188 56.4
FAN21G3006 Fragaria x ananassa HOM05D004698 ORTHO05D005699 4.6e-48 195.3 188 56.4
Manes.06G169600 Manihot esculenta HOM05D004698 ORTHO05D005699 4.6e-48 195.3 196 55.1
FAN25G1145 Fragaria x ananassa HOM05D004698 ORTHO05D005699 6.0e-48 194.9 188 56.4
Actinidia22026 Actinidia chinensis HOM05D004698 ORTHO05D005699 7.8e-48 194.5 199 53.3
FAN11G2375 Fragaria x ananassa HOM05D004698 ORTHO05D005699 1.0e-47 194.1 188 55.9
FAN16G2726 Fragaria x ananassa HOM05D004698 ORTHO05D005699 1.0e-47 194.1 188 56.4
Gohir.A05G066748 Gossypium hirsutum HOM05D004698 ORTHO05D005699 1.3e-47 193.7 202 55.4
Actinidia40436 Actinidia chinensis HOM05D004698 ORTHO05D005699 1.7e-47 193.4 198 53.0
AL6G31140 Arabidopsis lyrata HOM05D004698 ORTHO05D005699 1.7e-47 193.4 193 55.4
ClCG03G013670 Citrullus lanatus HOM05D004698 ORTHO05D005699 3.0e-47 192.6 184 57.1
Potri.001G013700 Populus trichocarpa HOM05D004698 ORTHO05D005699 3.0e-47 192.6 198 55.1
Hma1.2p1_0183F.1_g080820 Hydrangea macrophylla HOM05D004698 ORTHO05D005699 3.9e-47 192.2 197 54.8
ECA247G2042 Erigeron canadensis HOM05D004698 ORTHO05D005699 5.0e-47 191.8 191 52.4
Nitab4.5_0001146g0120 Nicotiana tabacum HOM05D004698 ORTHO05D005699 5.0e-47 191.8 196 53.1
BcaB01g04838 Brassica carinata HOM05D004698 ORTHO05D005699 6.6e-47 191.4 193 53.9
CARHR193280 Cardamine hirsuta HOM05D004698 ORTHO05D005699 6.6e-47 191.4 193 55.4
CAN.G649.13 Capsicum annuum HOM05D004698 ORTHO05D005699 8.6e-47 191.0 193 53.4
CDE10G0673 Ceratophyllum demersum HOM05D004698 ORTHO05D005699 8.6e-47 191.0 196 54.1
AUR62019223 Chenopodium quinoa HOM05D004698 ORTHO05D005699 1.1e-46 190.7 193 54.9
BolC3t13583H Brassica oleracea HOM05D004698 ORTHO05D005699 1.5e-46 190.3 193 53.4
CiPaw.13G168500 Carya illinoinensis HOM05D004698 ORTHO05D005699 1.5e-46 190.3 184 56.5
Gorai.013G249300 Gossypium raimondii HOM05D004698 ORTHO05D005699 1.5e-46 190.3 196 54.6
C03p11130 Brassica napus HOM05D004698 ORTHO05D005699 1.9e-46 189.9 193 53.4
Nitab4.5_0013751g0010 Nicotiana tabacum HOM05D004698 ORTHO05D005699 1.9e-46 189.9 227 49.3
AT5G19630 Arabidopsis thaliana HOM05D004698 ORTHO05D005699 2.5e-46 189.5 193 54.4
Gohir.A13G214800 Gossypium hirsutum HOM05D004698 ORTHO05D005699 2.5e-46 189.5 196 54.6
ATR0605G157 Amborella trichopoda HOM05D004698 ORTHO05D005699 3.3e-46 189.1 194 52.6
Carub.0006s1798 Capsella rubella HOM05D004698 ORTHO05D005699 3.3e-46 189.1 193 54.4
TWI60G0418 Tripterygium wilfordii HOM05D004698 ORTHO05D005699 3.3e-46 189.1 196 54.6
BcaC03g13695 Brassica carinata HOM05D004698 ORTHO05D005699 7.3e-46 188.0 196 52.6
Lsat_1_v5_gn_9_26700 Lactuca sativa HOM05D004698 ORTHO05D005699 7.3e-46 188.0 193 52.8
Solyc01g006480.3 Solanum lycopersicum HOM05D004698 ORTHO05D005699 7.3e-46 188.0 188 55.3
PGSC0003DMG400032153 Solanum tuberosum HOM05D004698 ORTHO05D005699 9.5e-46 187.6 188 54.8
Sopen01g002460 Solanum pennellii HOM05D004698 ORTHO05D005699 1.2e-45 187.2 188 55.3
Sabra03G0155400 Salix brachista HOM05D004698 ORTHO05D005699 2.1e-45 186.4 203 52.7
Potri.003G212400 Populus trichocarpa HOM05D004698 ORTHO05D005699 2.8e-45 186.0 191 53.9
Potri.T056064 Populus trichocarpa HOM05D004698 ORTHO05D005699 2.8e-45 186.0 191 53.9
Sabra03G0158600 Salix brachista HOM05D004698 ORTHO05D005699 6.2e-45 184.9 195 53.3
MSTRG.26088 Avicennia marina HOM05D004698 ORTHO05D005699 8.0e-45 184.5 197 51.8
Zm00001eb252760 Zea mays HOM05D004698 ORTHO05D005699 1.1e-44 184.1 208 50.0
A03p09560 Brassica napus HOM05D004698 ORTHO05D005699 1.4e-44 183.7 191 52.9
BraA03t10273Z Brassica rapa HOM05D004698 ORTHO05D005699 1.4e-44 183.7 191 52.9
CANSAT54G0070 Cannabis sativa HOM05D004698 ORTHO05D005699 1.8e-44 183.3 192 53.1
SEGI_09892 Sequoiadendron giganteum HOM05D004698 ORTHO05D005699 4.0e-44 182.2 188 55.9
Os02g0717100 Oryza sativa ssp. japonica HOM05D004698 ORTHO05D005699 6.8e-44 181.4 203 50.7
Peaxi162Scf00403g00114 Petunia axillaris HOM05D004698 ORTHO05D005699 6.8e-44 181.4 191 51.8
Lju124A28T33 Lonicera japonica HOM05D004698 ORTHO05D005699 8.9e-44 181.0 192 52.6
Psat6g242840 Pisum sativum HOM05D004698 ORTHO05D005699 8.9e-44 181.0 193 54.9
SalBow1G8278 Salvia bowleyana HOM05D004698 ORTHO05D005699 2.0e-43 179.9 196 51.5
HanXRQChr10g0300701 Helianthus annuus HOM05D004698 ORTHO05D005699 4.4e-43 178.7 186 52.7
Psat2g056640 Pisum sativum HOM05D004698 ORTHO05D005699 9.8e-43 177.6 193 54.4
SGA_v2.0_scaffold94G28426 Striga asiatica HOM05D004698 ORTHO05D005699 1.7e-42 176.8 196 49.5
MD11G1019500 Malus domestica HOM05D004698 ORTHO05D005699 2.2e-42 176.4 248 44.4
Lj2C370G0 Lonicera japonica HOM05D004698 ORTHO05D005699 2.9e-42 176.0 210 49.0
Peaxi162Scf00258g00313 Petunia axillaris HOM05D004698 ORTHO05D005699 6.4e-42 174.9 193 49.7
Manes.08G045900 Manihot esculenta HOM05D004698 ORTHO05D005699 1.1e-41 174.1 198 48.0
Manes.08G046200 Manihot esculenta HOM05D004698 ORTHO05D005699 5.4e-41 171.8 198 48.0
Nitab4.5_0000324g0230 Nicotiana tabacum HOM05D004698 ORTHO05D005699 7.0e-41 171.4 203 46.8
Nitab4.5_0003890g0030 Nicotiana tabacum HOM05D004698 ORTHO05D005699 7.0e-41 171.4 203 46.8
unitig_0.g767 Utricularia gibba HOM05D004698 ORTHO05D005699 1.2e-40 170.6 186 50.5
vmacro07926 Vaccinium macrocarpon HOM05D004698 ORTHO05D005699 1.2e-40 170.6 261 41.8
AagrBONN_evm.TU.Sc2ySwM_228.4678 Anthoceros agrestis HOM05D004698 ORTHO05D005699 1.6e-40 170.2 194 48.5
BcaB05g23400 Brassica carinata HOM05D004698 ORTHO05D005699 1.6e-40 170.2 195 47.7
CAN.G364.5 Capsicum annuum HOM05D004698 ORTHO05D005699 2.7e-40 169.5 197 48.2
SHI30529 Sapria himalayana HOM05D004698 ORTHO05D005699 6.0e-40 168.3 197 49.7
PGSC0003DMG400033344 Solanum tuberosum HOM05D004698 ORTHO05D005699 6.0e-40 168.3 197 47.7
Solyc03g063290.3 Solanum lycopersicum HOM05D004698 ORTHO05D005699 8.6e-39 164.5 197 47.2
Sopen03g015850 Solanum pennellii HOM05D004698 ORTHO05D005699 8.6e-39 164.5 197 47.2
GSVIVG01025354001 Vitis vinifera HOM05D004698 ORTHO05D005699 1.2e-37 160.6 153 57.5
Pp3c7_25270 Physcomitrium patens HOM05D004698 ORTHO05D005699 6.2e-37 158.3 190 43.7
COL.COLO4_10392 Corchorus olitorius HOM05D004698 ORTHO05D005699 8.1e-37 157.9 297 37.4
SMO117G0218 Selaginella moellendorffii HOM05D004698 ORTHO05D005699 8.1e-37 157.9 198 44.9
Pp3c25_340 Physcomitrium patens HOM05D004698 ORTHO05D005699 8.9e-36 154.5 187 45.5
BNapus_Darmor_BZH_scaffold_38p02250 Brassica napus HOM05D004698 ORTHO05D005699 4.4e-35 152.1 145 55.9
Cc06_g16050 Coffea canephora HOM05D004698 ORTHO05D005699 1.4e-33 147.1 153 54.2
Mapoly0046s0043 Marchantia polymorpha HOM05D004698 ORTHO05D005699 1.9e-33 146.7 190 44.7
BolC2t06975H Brassica oleracea HOM05D004698 ORTHO05D005699 3.0e-31 139.4 145 52.4
TAR636G0496 Trochodendron aralioides HOM05D004698 ORTHO05D005699 1.5e-30 137.1 127 59.8
Sabra01G0010100 Salix brachista HOM05D004698 ORTHO05D005699 1.9e-30 136.7 331 32.3
Haze_23028 Corylus avellana HOM05D004698 ORTHO05D005699 4.4e-27 125.6 173 43.4
CSS0002150 Camellia sinensis var. sinensis HOM05D004698 ORTHO05D005699 7.6e-27 124.8 107 60.7
Dinv36316 Davidia involucrata HOM05D004698 ORTHO05D005699 1.6e-24 117.1 111 55.0
Cc01_g03800 Coffea canephora HOM05D004698 ORTHO05D005699 1.7e-23 113.6 130 51.5
A02p05700 Brassica napus HOM05D004698 ORTHO05D005699 3.9e-23 112.5 111 53.2
BraA02t05522Z Brassica rapa HOM05D004698 ORTHO05D005699 3.9e-23 112.5 111 53.2
MBI01_g33892_MAGBIO Magnolia biondii HOM05D004698 ORTHO05D005699 3.9e-23 112.5 144 47.2
Cpa.g.sc117.1 Carica papaya HOM05D004698 ORTHO05D005699 3.6e-21 105.9 99 55.6
SalBow1G8507 Salvia bowleyana HOM05D004698 ORTHO05D005699 3.1e-20 102.8 112 51.8
MD03G1017600 Malus domestica HOM05D004698 ORTHO05D005699 9.9e-19 97.8 95 54.7
HPP92_022782 Vanilla planifolia HOM05D004698 ORTHO05D005699 2.2e-18 96.7 103 50.5
Duzib170G0131 Durio zibethinus HOM05D004698 ORTHO05D005699 1.0e-15 87.8 93 52.7
Manes.10G126700 Manihot esculenta HOM05D004698 ORTHO05D005699 1.7e-15 87.0 89 53.9
PRCOL_00006777 Prasinoderma coloniale HOM05D004698 ORTHO05D005699 3.0e-15 86.3 233 27.9
Nn7g36023 Nelumbo nucifera HOM05D004698 ORTHO05D005699 5.1e-15 85.5 90 53.3
Eucgr.L01569 Eucalyptus grandis HOM05D004698 ORTHO05D005699 1.5e-14 84.0 96 47.9
RcHm_v2.0_Chr5g0080421 Rosa chinensis HOM05D004698 ORTHO05D005699 3.1e-12 76.3 86 50.0
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 7.6e-11 71.6 71 56.3
MD03G1115900 Malus domestica HOM05D004698 ORTHO05D005699 2.9e-10 69.7 117 38.5
Dinv15836 Davidia involucrata HOM05D004698 ORTHO05D005699 1.8e-07 60.5 68 48.5
Sabra16G0026900 Salix brachista HOM05D004698 ORTHO05D005699 2.3e-07 60.1 87 46.0
RcHm_v2.0_Chr1g0343461 Rosa chinensis HOM05D004698 ORTHO05D005699 5.6e-06 55.5 54 53.7


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