Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 1.3e-213 746.1 375 100.0
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 7.1e-196 687.2 375 93.1
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 7.9e-179 630.6 375 85.3
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 1.1e-175 620.2 371 84.4
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 2.8e-152 542.3 311 83.6
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 4.1e-151 538.5 311 82.6
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 2.0e-150 536.2 375 74.4
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 1.3e-149 533.5 372 73.4
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 1.1e-148 530.4 338 77.8
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 2.5e-148 529.3 337 77.7
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 5.5e-148 528.1 375 72.0
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 7.2e-148 527.7 374 71.4
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 1.2e-147 526.9 358 73.5
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 1.6e-147 526.6 313 79.9
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 4.7e-147 525.0 342 76.0
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 4.7e-147 525.0 356 73.9
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 6.1e-147 524.6 344 76.2
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 6.1e-147 524.6 381 69.8
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 2.3e-146 522.7 315 80.0
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 4.0e-146 521.9 342 76.9
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 6.8e-146 521.2 374 70.9
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 8.8e-146 520.8 357 72.3
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 8.8e-146 520.8 330 76.1
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 2.0e-145 519.6 357 72.0
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 3.4e-145 518.8 324 77.5
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 4.4e-145 518.5 311 80.1
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 5.7e-145 518.1 363 71.9
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 9.8e-145 517.3 377 70.3
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 1.7e-144 516.5 359 72.7
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.7e-144 516.5 330 77.3
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.7e-144 516.5 330 77.3
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 2.2e-144 516.2 338 77.2
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 4.8e-144 515.0 360 73.1
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 4.8e-144 515.0 330 77.0
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 6.3e-144 514.6 314 79.6
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 8.3e-144 514.2 337 76.3
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 1.8e-143 513.1 368 71.2
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 4.1e-143 511.9 312 80.1
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 4.1e-143 511.9 375 69.6
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 4.1e-143 511.9 318 77.4
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 5.4e-143 511.5 318 77.4
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 9.1e-143 510.8 358 71.8
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 1.2e-142 510.4 321 76.9
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 3.5e-142 508.8 302 80.8
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 4.5e-142 508.4 317 78.5
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 7.7e-142 507.7 314 78.7
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 1.0e-141 507.3 343 73.5
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 1.3e-141 506.9 382 67.3
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 1.3e-141 506.9 355 72.4
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 1.7e-141 506.5 339 74.6
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 1.7e-141 506.5 363 71.9
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 2.3e-141 506.1 376 67.8
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 2.3e-141 506.1 307 79.5
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 5.0e-141 505.0 376 67.0
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 8.6e-141 504.2 316 79.7
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 1.5e-140 503.4 377 69.2
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 1.9e-140 503.1 291 82.5
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 1.9e-140 503.1 378 67.2
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 3.3e-140 502.3 318 74.8
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 3.3e-140 502.3 311 78.8
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 7.2e-140 501.1 325 73.5
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 1.2e-139 500.4 378 67.7
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 1.6e-139 500.0 378 69.3
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 1.6e-139 500.0 360 68.6
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 2.1e-139 499.6 381 67.7
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 2.8e-139 499.2 314 74.5
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.6e-139 498.8 322 72.7
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 4.7e-139 498.4 291 80.1
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 1.0e-138 497.3 314 73.6
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 1.4e-138 496.9 314 73.6
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 3.0e-138 495.7 329 72.3
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 3.0e-138 495.7 315 73.7
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 4.0e-138 495.4 299 78.6
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 5.2e-138 495.0 314 76.1
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 5.2e-138 495.0 361 69.3
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 6.8e-138 494.6 323 72.1
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 6.8e-138 494.6 323 72.1
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 8.9e-138 494.2 314 73.6
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 8.9e-138 494.2 314 73.6
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 1.5e-137 493.4 331 73.1
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 9.8e-137 490.7 376 65.7
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 1.3e-136 490.3 315 74.6
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 1.7e-136 490.0 306 77.8
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 2.2e-136 489.6 347 69.5
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 3.1e-135 485.7 380 66.1
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 5.4e-135 485.0 366 66.4
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 2.0e-134 483.0 345 68.4
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 5.9e-134 481.5 305 74.1
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.9e-133 479.2 385 65.5
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 2.5e-132 476.1 342 70.2
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 4.7e-131 471.9 291 75.6
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 2.3e-130 469.5 410 61.7
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 8.3e-128 461.1 329 67.8
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 1.2e-126 457.2 359 65.2
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 6.6e-125 451.4 281 77.2
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 9.5e-124 447.6 291 71.8
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 8.0e-123 444.5 314 70.1
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.5e-121 440.3 364 59.6
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 2.4e-119 433.0 316 64.2
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 9.2e-119 431.0 326 62.9
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.6e-118 430.3 316 63.9
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 2.1e-118 429.9 303 65.7
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 3.5e-118 429.1 307 70.0
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 6.0e-118 428.3 363 58.4
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 4.0e-114 415.6 229 85.6
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 2.7e-110 402.9 432 54.2
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 2.3e-93 346.7 182 86.8
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 3.9e-93 345.9 250 68.8
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 7.3e-92 341.7 292 57.9
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 5.3e-82 308.9 269 65.4
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 2.0e-81 307.0 343 52.5
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 2.6e-81 306.6 215 65.6
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 4.5e-81 305.8 193 78.8
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 1.1e-79 301.2 274 59.1
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 4.2e-79 299.3 252 62.7
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 1.8e-77 293.9 209 70.8
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 4.0e-45 186.4 242 47.1
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 9.1e-26 122.1 94 67.0
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 1.7e-19 101.3 88 60.2
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 1.1e-18 98.6 94 57.4
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.5e-15 87.4 63 66.7
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 2.7e-09 67.4 36 80.6


User provided reference genes

Program Settings