Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G261200 Glycine max HOM05D007648 ORTHO05D009613 5.1e-35 150.6 79 100.0
Lj5g0008894 Lotus japonicus HOM05D007648 ORTHO05D009613 5.8e-31 137.1 77 88.3
VMungo0647G0751 Vigna mungo HOM05D007648 ORTHO05D009613 9.9e-31 136.3 75 93.3
Ca_13484_v3 Cicer arietinum L. HOM05D007648 ORTHO05D009613 8.4e-30 133.3 77 87.0
Phvul.001G002600 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 1.9e-29 132.1 77 87.0
Psat6g001120 Pisum sativum HOM05D007648 ORTHO05D009613 2.4e-29 131.7 77 85.7
Phvul.001G002300 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 4.1e-29 131.0 77 85.7
GSVIVG01008741001 Vitis vinifera HOM05D007648 ORTHO05D009613 4.1e-29 131.0 77 84.4
Lalb_Chr19g0131601 Lupinus albus HOM05D007648 ORTHO05D009613 5.4e-29 130.6 77 81.8
arahy.Tifrunner.gnm1.ann1.8I3IQY Arachis hypogaea HOM05D007648 ORTHO05D009613 4.6e-28 127.5 77 81.8
arahy.Tifrunner.gnm1.ann1.EILY3I Arachis hypogaea HOM05D007648 ORTHO05D009613 4.6e-28 127.5 77 81.8
Medtr1g026100 Medicago truncatula HOM05D007648 ORTHO05D009613 4.6e-28 127.5 77 83.1
QL02p012929 Quercus lobata HOM05D007648 ORTHO05D009613 6.6e-27 123.6 76 84.2
Dinv31891 Davidia involucrata HOM05D007648 ORTHO05D009613 8.7e-27 123.2 77 80.5
CiPaw.07G143700 Carya illinoinensis HOM05D007648 ORTHO05D009613 1.1e-26 122.9 76 82.9
Potri.014G181400 Populus trichocarpa HOM05D007648 ORTHO05D009613 3.3e-26 121.3 75 80.0
Sabra14G0141300 Salix brachista HOM05D000525 ORTHO05D001368 3.3e-26 121.3 75 80.0
Haze_22702 Corylus avellana HOM05D007648 ORTHO05D009613 4.3e-26 120.9 75 82.7
TAR625G0376 Trochodendron aralioides HOM05D007648 ORTHO05D009613 5.6e-26 120.6 77 77.9
Prupe.1G359500 Prunus persica HOM05D007648 ORTHO05D009613 9.6e-26 119.8 77 75.3
CAN.G22.4 Capsicum annuum HOM05D007648 ORTHO05D009613 1.6e-25 119.0 77 76.6
CSS0030217 Camellia sinensis var. sinensis HOM05D007648 ORTHO05D009613 2.1e-25 118.6 77 79.2
RcHm_v2.0_Chr6g0303661 Rosa chinensis HOM05D007648 ORTHO05D009613 2.1e-25 118.6 77 74.0
Sopen06g017690 Solanum pennellii HOM05D007648 ORTHO05D009613 2.1e-25 118.6 77 75.3
PGSC0003DMG400023820 Solanum tuberosum HOM05D007648 ORTHO05D009613 4.7e-25 117.5 77 74.0
Sed0006121 Sechium edule HOM05D007648 ORTHO05D009613 8.1e-25 116.7 76 72.4
FvH4_2g37960 Fragaria vesca HOM05D007648 ORTHO05D009613 1.1e-24 116.3 76 75.0
Manes.05G142600 Manihot esculenta HOM05D007648 ORTHO05D009613 1.4e-24 115.9 76 76.3
Sc02g0008880 Simmondsia chinensis HOM05D007648 ORTHO05D009613 1.8e-24 115.5 76 75.0
ClCG05G015420 Citrullus lanatus HOM05D007648 ORTHO05D009613 2.4e-24 115.2 77 70.1
Rhsim07G0248300 Rhododendron simsii HOM05D007648 ORTHO05D009613 3.1e-24 114.8 77 75.3
Actinidia29767 Actinidia chinensis HOM05D007648 ORTHO05D009613 4.0e-24 114.4 77 76.6
vmacro17151 Vaccinium macrocarpon HOM05D007648 ORTHO05D009613 5.2e-24 114.0 77 75.3
FAN15G0474 Fragaria x ananassa HOM05D007648 ORTHO05D009613 6.9e-24 113.6 76 73.7
AT1G76065 Arabidopsis thaliana HOM05D007648 ORTHO05D009613 9.0e-24 113.2 77 70.1
Eucgr.F03708 Eucalyptus grandis HOM05D007648 ORTHO05D009613 9.0e-24 113.2 77 74.0
Sc02g0008840 Simmondsia chinensis HOM05D007648 ORTHO05D009613 9.0e-24 113.2 76 73.7
BraA08t32933Z Brassica rapa HOM05D007648 ORTHO05D009613 1.2e-23 112.8 77 70.1
CARHR069590 Cardamine hirsuta HOM05D007648 ORTHO05D009613 1.2e-23 112.8 77 70.1
MD15G1006800 Malus domestica HOM05D007648 ORTHO05D009613 1.2e-23 112.8 77 70.1
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 1.2e-23 112.8 75 72.0
ECA238G3742 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-23 112.5 72 75.0
MD08G1007600 Malus domestica HOM05D007648 ORTHO05D009613 1.5e-23 112.5 77 71.4
Lsat_1_v5_gn_5_1580 Lactuca sativa HOM05D007648 ORTHO05D009613 2.0e-23 112.1 76 71.1
Rhsim07G0248100 Rhododendron simsii HOM05D007648 ORTHO05D009613 2.0e-23 112.1 76 76.3
Aqoxy5G01099 Aquilegia oxysepala HOM05D007648 ORTHO05D009613 2.6e-23 111.7 77 72.7
Carub.0002s2295 Capsella rubella HOM05D007648 ORTHO05D009613 2.6e-23 111.7 77 68.8
Cc10_g01140 Coffea canephora HOM05D007648 ORTHO05D009613 2.6e-23 111.7 78 73.1
COL.COLO4_26084 Corchorus olitorius HOM05D007648 ORTHO05D009613 2.6e-23 111.7 77 72.7
FAN20G1741 Fragaria x ananassa HOM05D007648 ORTHO05D009613 2.6e-23 111.7 76 72.4
Duzib093G2040 Durio zibethinus HOM05D007648 ORTHO05D009613 3.4e-23 111.3 77 72.7
CAN.G22.7 Capsicum annuum HOM05D007648 ORTHO05D009613 4.4e-23 110.9 74 75.7
TWI12G0541 Tripterygium wilfordii HOM05D007648 ORTHO05D009613 4.4e-23 110.9 77 68.8
A08p09340 Brassica napus HOM05D007648 ORTHO05D009613 5.8e-23 110.5 77 68.8
BolC8t48002H Brassica oleracea HOM05D007648 ORTHO05D009613 5.8e-23 110.5 77 68.8
DCAR_021446 Daucus carota HOM05D007648 ORTHO05D009613 5.8e-23 110.5 77 70.1
HanXRQChr06g0185111 Helianthus annuus HOM05D007648 ORTHO05D009613 5.8e-23 110.5 75 72.0
Thecc.08G051700 Theobroma cacao HOM05D007648 ORTHO05D009613 5.8e-23 110.5 77 72.7
Thhalv10019391m.g Eutrema salsugineum HOM05D007648 ORTHO05D009613 9.9e-23 109.8 77 70.1
SalBow7G1731 Salvia bowleyana HOM05D007648 ORTHO05D009613 9.9e-23 109.8 76 72.4
THA.LOC104811443 Tarenaya hassleriana HOM05D007648 ORTHO05D009613 9.9e-23 109.8 76 69.7
PSO210G3155 Papaver somniferum HOM05D007648 ORTHO05D009613 1.3e-22 109.4 73 75.3
AL2G36100 Arabidopsis lyrata HOM05D007648 ORTHO05D009613 1.7e-22 109.0 77 66.2
BcaB07g30075 Brassica carinata HOM05D007648 ORTHO05D009613 1.7e-22 109.0 77 68.8
BcaC07g37632 Brassica carinata HOM05D007648 ORTHO05D009613 1.7e-22 109.0 77 67.5
Aa31LG4G6180 Aethionema arabicum HOM05D007648 ORTHO05D009613 2.2e-22 108.6 76 69.7
Atru.chr13.217 Acer truncatum HOM05D007648 ORTHO05D009613 2.9e-22 108.2 75 73.3
Ciclev10003012m.g Citrus clementina HOM05D007648 ORTHO05D009613 3.8e-22 107.8 76 68.4
Ah.00g000660 Amaranthus hybridus HOM05D007648 ORTHO05D009613 8.4e-22 106.7 75 69.3
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 8.4e-22 106.7 76 68.4
Migut.C00899 Erythranthe guttata HOM05D007648 ORTHO05D009613 8.4e-22 106.7 76 69.7
Gohir.D01G035600 Gossypium hirsutum HOM05D007648 ORTHO05D009613 1.9e-21 105.5 77 68.8
Gorai.002G043700 Gossypium raimondii HOM05D007648 ORTHO05D009613 2.4e-21 105.1 77 68.8
MELO3C003728.2 Cucumis melo HOM05D007648 ORTHO05D009613 3.2e-21 104.8 76 64.5
CsaV3_3G046120 Cucumis sativus L. HOM05D007648 ORTHO05D009613 4.2e-21 104.4 76 64.5
Gohir.A01G044700 Gossypium hirsutum HOM05D007648 ORTHO05D009613 4.2e-21 104.4 77 67.5
Os02g0667000 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 1.2e-20 102.8 76 68.4
BraA02t08664Z Brassica rapa HOM05D007648 ORTHO05D009613 2.7e-20 101.7 74 66.2
Nitab4.5_0004193g0030 Nicotiana tabacum HOM05D000998 ORTHO05D000806 6.0e-20 100.5 66 74.2
CDE04G2628 Ceratophyllum demersum HOM05D007648 ORTHO05D009613 1.0e-19 99.8 76 68.4
HPP92_026879 Vanilla planifolia HOM05D007648 ORTHO05D009613 1.7e-19 99.0 79 65.8
HPP92_003481 Vanilla planifolia HOM05D007648 ORTHO05D009613 2.3e-19 98.6 79 64.6
Nitab4.5_0000716g0050 Nicotiana tabacum HOM05D000998 ORTHO05D000806 6.6e-19 97.1 61 80.3
Peaxi162Scf00394g00212 Petunia axillaris HOM05D007648 ORTHO05D009613 2.5e-18 95.1 65 72.3
BolC2t11627H Brassica oleracea HOM05D007648 ORTHO05D009613 9.6e-18 93.2 77 61.0
MBI05_g46751_MAGBIO Magnolia biondii HOM05D007648 ORTHO05D009613 1.3e-17 92.8 69 66.7
C02p55750 Brassica napus HOM05D007648 ORTHO05D009613 5.8e-15 84.0 66 62.1
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 1.3e-14 82.8 130 40.0
A02p36690 Brassica napus HOM05D007648 ORTHO05D009613 2.9e-14 81.6 59 66.1
Mapoly0088s0028 Marchantia polymorpha HOM05D007648 ORTHO05D009613 3.8e-14 81.3 77 53.2
Pp3c8_20950 Physcomitrium patens HOM05D007648 ORTHO05D009613 6.0e-12 73.9 77 50.6
AagrBONN_evm.TU.Sc2ySwM_344.3278 Anthoceros agrestis HOM05D007648 ORTHO05D009613 7.9e-12 73.6 76 48.7
AUR62013884 Chenopodium quinoa HOM05D007648 ORTHO05D009613 3.9e-11 71.2 44 75.0
SalBow1G6040 Salvia bowleyana HOM05D038733 ORTHO05D009613 2.5e-10 68.6 44 72.7
SalBow7G3523 Salvia bowleyana HOM05D038733 ORTHO05D009613 2.5e-10 68.6 44 72.7
Os03g0159800 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 5.6e-10 67.4 44 72.7
unitig_748.g7721 Utricularia gibba HOM05D007648 ORTHO05D009613 7.4e-10 67.0 63 52.4
Actinidia37950 Actinidia chinensis HOM05D007648 ORTHO05D009613 1.4e-08 62.8 38 78.9
MCO07G444 Micromonas commoda HOM05D007648 ORTHO05D009613 5.8e-07 57.4 72 45.8


User provided reference genes

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