Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G259300 Glycine max HOM05D013708 ORTHO05D003197 8.4e-142 508.1 532 100.0
Glyma.14G220400 Glycine max HOM05D013708 ORTHO05D003197 4.8e-89 332.8 532 73.3
VMungo0647G0628 Vigna mungo HOM05D013708 ORTHO05D003197 3.0e-62 243.8 497 51.7
Phvul.001G004700 Phaseolus vulgaris HOM05D013708 ORTHO05D003197 8.1e-60 235.7 534 64.4
Lj5g0025072 Lotus japonicus HOM05D004095 ORTHO05D003197 3.1e-35 154.1 472 30.9
TPR.G26385 Trifolium pratense HOM05D013708 ORTHO05D003197 6.9e-27 126.3 479 44.9
Medtr1g025620 Medicago truncatula HOM05D013708 ORTHO05D003197 1.3e-25 122.1 129 58.1
Ca_13423_v3 Cicer arietinum L. HOM05D013708 ORTHO05D003197 1.7e-25 121.7 126 55.6
Ca_13439_v3 Cicer arietinum L. HOM05D013708 ORTHO05D003197 1.7e-25 121.7 126 55.6
Psat6g003360 Pisum sativum HOM05D013708 ORTHO05D003197 1.1e-24 119.0 477 48.8
Medtr1g034990 Medicago truncatula HOM05D013708 ORTHO05D003197 1.9e-21 108.2 482 26.8
TPR.G32858 Trifolium pratense HOM05D013708 ORTHO05D003197 2.5e-21 107.8 79 63.3
Lalb_Chr08g0246191 Lupinus albus HOM05D004095 ORTHO05D003197 7.4e-13 79.7 88 53.4
arahy.Tifrunner.gnm1.ann1.I59WU7 Arachis hypogaea HOM05D004095 ORTHO05D003197 9.6e-13 79.3 79 57.0
arahy.Tifrunner.gnm1.ann1.VNIF6J Arachis hypogaea HOM05D004095 ORTHO05D003197 9.6e-13 79.3 79 57.0
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 5.3e-11 73.6 128 38.3
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 9.0e-11 72.8 96 40.6
Sabra02G0015500 Salix brachista HOM05D004095 ORTHO05D003197 4.5e-10 70.5 86 41.9
MSTRG.25264 Avicennia marina HOM05D004095 ORTHO05D003197 1.7e-09 68.6 95 44.2
SalBow7G2790 Salvia bowleyana HOM05D004095 ORTHO05D003197 2.9e-09 67.8 85 43.5
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 3.8e-09 67.4 86 43.0
QL02p012206 Quercus lobata HOM05D004095 ORTHO05D003197 3.8e-09 67.4 120 44.2
Actinidia15439 Actinidia chinensis HOM05D004095 ORTHO05D003197 6.5e-09 66.6 121 39.7
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 6.5e-09 66.6 84 41.7
PGR031G2559 Punica granatum HOM05D004095 ORTHO05D003197 6.5e-09 66.6 82 42.7
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 8.5e-09 66.2 82 43.9
Cpa.g.sc26.299 Carica papaya HOM05D004095 ORTHO05D003197 4.2e-08 63.9 82 36.6
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 4.2e-08 63.9 89 38.2
Duzib093G1456 Durio zibethinus HOM05D004095 ORTHO05D003197 5.5e-08 63.5 92 41.3
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 7.2e-08 63.2 78 44.9
Ciclev10002009m.g Citrus clementina HOM05D004095 ORTHO05D003197 7.2e-08 63.2 78 42.3
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 7.2e-08 63.2 75 48.0
MSTRG.22345 Avicennia marina HOM05D004095 ORTHO05D003197 9.3e-08 62.8 93 39.8
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 9.3e-08 62.8 173 35.3
Migut.N03174 Erythranthe guttata HOM05D004095 ORTHO05D003197 9.3e-08 62.8 90 40.0
Sabra05G0187500 Salix brachista HOM05D004095 ORTHO05D003197 9.3e-08 62.8 82 41.5
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 1.2e-07 62.4 75 42.7
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.6e-07 62.0 156 35.3
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 1.6e-07 62.0 79 46.8
Migut.O00908 Erythranthe guttata HOM05D004095 ORTHO05D003197 2.1e-07 61.6 90 41.1
Haze_03728 Corylus avellana HOM05D004095 ORTHO05D003197 2.7e-07 61.2 88 35.2
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 2.7e-07 61.2 66 51.5
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 4.6e-07 60.5 66 39.4
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 4.6e-07 60.5 79 46.8
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 4.6e-07 60.5 112 39.3
Aa31LG7G4540 Aethionema arabicum HOM05D008819 ORTHO05D003197 6.1e-07 60.1 81 39.5
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 6.1e-07 60.1 84 41.7
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 7.9e-07 59.7 76 52.6
Oeu026642.1 Olea europaea HOM05D004095 ORTHO05D003197 7.9e-07 59.7 90 46.7
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 7.9e-07 59.7 78 46.2
Thecc.08G047900 Theobroma cacao HOM05D004095 ORTHO05D003197 7.9e-07 59.7 84 42.9
BcaC08g47318 Brassica carinata HOM05D008819 ORTHO05D003197 1.0e-06 59.3 62 48.4
A07p41430 Brassica napus HOM05D008819 ORTHO05D003197 1.0e-06 59.3 61 45.9
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 1.3e-06 58.9 120 40.8
Nitab4.5_0006505g0050 Nicotiana tabacum HOM05D004095 ORTHO05D003197 1.3e-06 58.9 81 43.2
BolC6t40021H Brassica oleracea HOM05D008819 ORTHO05D003197 1.8e-06 58.5 56 51.8
CANSAT11G2253 Cannabis sativa HOM05D004095 ORTHO05D003197 1.8e-06 58.5 90 40.0
CANSAT25G2395 Cannabis sativa HOM05D004095 ORTHO05D003197 1.8e-06 58.5 85 34.1
BcaC08g47079 Brassica carinata HOM05D008819 ORTHO05D003197 2.3e-06 58.2 59 50.8
Prupe.1G362800 Prunus persica HOM05D004095 ORTHO05D003197 2.3e-06 58.2 89 36.0
EL10Ac3g06641 Beta vulgaris HOM05D004095 ORTHO05D003197 3.0e-06 57.8 92 39.1
Cfa013982 Carpinus fangiana HOM05D004095 ORTHO05D003197 3.0e-06 57.8 82 35.4
Eucgr.H00956 Eucalyptus grandis HOM05D066110 ORTHO05D003197 3.0e-06 57.8 91 37.4
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 3.0e-06 57.8 86 36.0
Potri.005G242400 Populus trichocarpa HOM05D004095 ORTHO05D003197 3.9e-06 57.4 83 38.6
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 3.9e-06 57.4 81 46.9
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 5.1e-06 57.0 81 35.8
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 5.1e-06 57.0 110 40.9
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 5.1e-06 57.0 55 40.0
unitig_0.g2088 Utricularia gibba HOM05D004095 ORTHO05D003197 5.1e-06 57.0 67 46.3
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 6.7e-06 56.6 80 36.2
Lj4A799T84 Lonicera japonica HOM05D004095 ORTHO05D003197 6.7e-06 56.6 94 43.6
unitig_749.g13901 Utricularia gibba HOM05D004095 ORTHO05D003197 6.7e-06 56.6 58 48.3
AL7G15100 Arabidopsis lyrata HOM05D004095 ORTHO05D003197 8.7e-06 56.2 63 44.4
Duzib041G0318 Durio zibethinus HOM05D004095 ORTHO05D003197 8.7e-06 56.2 85 40.0
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 8.7e-06 56.2 81 35.8
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 8.7e-06 56.2 83 47.0


User provided reference genes

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