Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 1.9e-70 269.2 156 100.0
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 9.0e-60 233.8 159 88.7
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 2.4e-57 225.7 154 87.7
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 9.3e-57 223.8 153 85.6
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 3.3e-54 215.3 154 82.5
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 2.0e-51 206.1 156 82.1
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 9.9e-51 203.8 160 77.5
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 1.7e-50 203.0 159 77.4
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 8.4e-50 200.7 161 78.3
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 2.4e-49 199.1 161 77.6
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 4.2e-49 198.4 193 66.8
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 9.3e-49 197.2 161 76.4
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 1.2e-48 196.8 166 74.7
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 1.6e-48 196.4 161 75.8
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 2.1e-48 196.1 158 75.3
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 2.7e-48 195.7 157 74.5
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 3.5e-48 195.3 158 75.3
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 4.6e-48 194.9 158 75.3
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 6.0e-48 194.5 160 74.4
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 7.9e-48 194.1 160 75.0
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 7.9e-48 194.1 157 77.7
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 1.0e-47 193.7 158 74.1
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.0e-47 193.7 160 74.4
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 1.3e-47 193.4 160 73.8
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 1.8e-47 193.0 154 77.3
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 2.3e-47 192.6 165 73.3
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 2.3e-47 192.6 153 78.4
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 2.3e-47 192.6 153 79.1
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 5.1e-47 191.4 158 74.1
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 5.1e-47 191.4 161 75.8
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 1.5e-46 189.9 165 72.7
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 2.5e-46 189.1 159 73.6
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 3.3e-46 188.7 161 73.9
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 3.3e-46 188.7 157 73.9
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 4.3e-46 188.3 160 76.2
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 5.6e-46 188.0 148 77.7
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 5.6e-46 188.0 162 72.8
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 7.4e-46 187.6 158 74.7
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 3.7e-45 185.3 154 76.6
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 3.7e-45 185.3 158 72.2
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 4.8e-45 184.9 158 74.1
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 6.2e-45 184.5 151 74.8
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 3.1e-44 182.2 162 70.4
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 3.1e-44 182.2 161 72.7
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 4.0e-44 181.8 148 75.0
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 4.0e-44 181.8 162 73.5
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 6.9e-44 181.0 159 71.7
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 9.0e-44 180.6 150 75.3
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 1.2e-43 180.3 144 75.7
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 2.0e-43 179.5 159 71.7
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 2.6e-43 179.1 161 70.8
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 2.6e-43 179.1 168 69.6
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 3.4e-43 178.7 156 74.4
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 3.4e-43 178.7 161 73.9
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 5.8e-43 177.9 150 74.0
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 7.6e-43 177.6 152 73.7
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 1.0e-42 177.2 150 72.7
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 2.9e-42 175.6 150 74.0
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 2.9e-42 175.6 147 74.1
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 3.8e-42 175.3 159 71.7
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 3.8e-42 175.3 149 75.2
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 4.9e-42 174.9 161 71.4
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 8.4e-42 174.1 153 73.2
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 1.4e-41 173.3 144 73.6
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 2.5e-41 172.6 141 74.5
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 3.2e-41 172.2 118 86.4
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 4.2e-41 171.8 155 69.7
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 5.5e-41 171.4 141 74.5
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 5.5e-41 171.4 196 59.7
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 7.1e-41 171.0 146 74.7
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 9.3e-41 170.6 145 76.6
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 2.7e-40 169.1 152 69.1
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 3.5e-40 168.7 139 74.1
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 3.5e-40 168.7 141 73.8
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 3.5e-40 168.7 155 69.0
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 6.0e-40 167.9 154 70.8
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 1.0e-39 167.2 155 69.7
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 1.3e-39 166.8 153 71.2
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 3.9e-39 165.2 117 85.5
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 8.7e-39 164.1 150 68.7
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 1.5e-38 163.3 148 73.0
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 1.5e-38 163.3 118 83.9
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 1.9e-38 162.9 148 75.0
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 1.9e-38 162.9 156 69.2
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 7.4e-38 161.0 192 49.0
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 1.6e-37 159.8 118 78.8
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 6.3e-37 157.9 118 80.5
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 1.0e-34 150.6 115 75.7
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 4.2e-33 145.2 158 60.1
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 7.2e-33 144.4 115 72.2
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 1.4e-31 140.2 125 70.4
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 5.1e-31 138.3 185 48.1
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 2.5e-30 136.0 115 70.4
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 3.3e-30 135.6 158 63.9
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 1.1e-28 130.6 153 51.0
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 6.9e-28 127.9 171 48.5
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 4.5e-27 125.2 98 64.3
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 7.7e-27 124.4 137 53.3
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 1.0e-26 124.0 126 59.5
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 2.9e-26 122.5 136 58.8
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 4.7e-24 115.2 103 62.1
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 2.2e-21 106.3 86 65.1
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 5.0e-18 95.1 149 46.3
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 2.6e-14 82.8 91 57.1
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 4.5e-11 72.0 98 46.9
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 5.9e-11 71.6 56 66.1
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 1.0e-10 70.9 60 56.7
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 4.2e-09 65.5 96 39.6
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 6.7e-07 58.2 67 52.2


User provided reference genes

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