Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 7.4e-31 136.7 77 100.0
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 1.1e-29 132.9 77 97.4
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 4.2e-26 120.9 78 85.9
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 2.3e-24 115.2 78 80.8
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 1.5e-23 112.5 78 78.2
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 1.9e-23 112.1 78 79.5
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 9.6e-23 109.8 77 79.2
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 4.1e-21 104.4 79 78.5
Phvul.001G027800 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 1.2e-20 102.8 79 78.5
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 1.5e-20 102.4 79 77.2
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 5.9e-20 100.5 74 79.7
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 2.2e-19 98.6 75 74.7
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 5.0e-19 97.4 79 75.9
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 8.5e-19 96.7 75 73.3
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 8.5e-19 96.7 78 73.1
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 8.5e-19 96.7 78 73.1
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 8.5e-19 96.7 75 74.7
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 1.1e-18 96.3 73 75.3
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 1.1e-18 96.3 75 76.0
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 1.4e-18 95.9 74 77.0
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 1.4e-18 95.9 74 73.0
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 1.9e-18 95.5 74 73.0
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 3.2e-18 94.7 75 72.0
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 4.2e-18 94.4 74 71.6
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 4.2e-18 94.4 73 71.2
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 1.2e-17 92.8 76 71.1
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 1.2e-17 92.8 74 77.0
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 1.6e-17 92.4 74 73.0
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 2.1e-17 92.0 75 70.7
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 2.7e-17 91.7 78 67.9
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 2.7e-17 91.7 78 67.9
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 3.6e-17 91.3 74 75.7
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 3.6e-17 91.3 78 69.2
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 1.0e-16 89.7 73 71.2
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 1.3e-16 89.4 70 74.3
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 3.9e-16 87.8 73 68.5
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 3.9e-16 87.8 78 67.9
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 8.7e-16 86.7 78 67.9
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 8.7e-16 86.7 76 65.8
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 1.5e-15 85.9 82 62.2
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 1.9e-15 85.5 73 67.1
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 1.9e-15 85.5 76 67.1
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 1.9e-15 85.5 75 68.0
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 7.4e-15 83.6 79 64.6
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 7.4e-15 83.6 75 64.0
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 9.7e-15 83.2 73 64.4
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 9.7e-15 83.2 78 65.4
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 9.7e-15 83.2 81 64.2
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 9.7e-15 83.2 78 69.2
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 2.8e-14 81.6 73 64.4
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 1.1e-13 79.7 77 64.9
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 6.9e-13 77.0 73 67.1
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 9.1e-13 76.6 86 55.8
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 9.1e-13 76.6 89 56.2
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 1.2e-12 76.3 73 61.6
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 2.0e-12 75.5 73 61.6
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 2.6e-12 75.1 73 64.4
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 3.4e-12 74.7 70 62.9
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 3.4e-12 74.7 70 62.9
CANSAT78G2421 Cannabis sativa HOM05D007769 ORTHO05D009588 3.4e-12 74.7 52 76.9
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 5.9e-12 73.9 73 65.8
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 7.7e-12 73.6 70 62.9
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 7.7e-12 73.6 70 62.9
Nn5g30603 Nelumbo nucifera HOM05D007769 ORTHO05D009588 7.7e-12 73.6 83 57.8
HPP92_006078 Vanilla planifolia HOM05D007769 ORTHO05D009588 2.2e-11 72.0 77 62.3
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 5.0e-11 70.9 73 58.9
CANSAT25G3084 Cannabis sativa HOM05D007769 ORTHO05D009588 1.9e-10 68.9 52 73.1
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 1.9e-10 68.9 70 61.4
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 2.5e-10 68.6 73 56.2
FAN27G1659 Fragaria x ananassa HOM05D007769 ORTHO05D009588 5.5e-10 67.4 77 61.0
Phvul.001G027900 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 5.5e-10 67.4 73 57.5
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 5.5e-10 67.4 57 73.7
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 1.6e-09 65.9 74 55.4
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 1.6e-09 65.9 75 54.7
Rhsim07G0219800 Rhododendron simsii HOM05D007769 ORTHO05D009588 2.7e-09 65.1 90 51.1
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 3.6e-09 64.7 88 52.3
Glyma.06G046700 Glycine max HOM05D015670 ORTHO05D009588 1.4e-08 62.8 73 54.8
FAN15G2183 Fragaria x ananassa HOM05D007769 ORTHO05D009588 6.7e-08 60.5 72 61.1
Medtr3g103180 Medicago truncatula HOM05D015670 ORTHO05D009588 6.7e-08 60.5 73 54.8
AagrBONN_evm.TU.Sc2ySwM_344.2823 Anthoceros agrestis HOM05D007769 ORTHO05D009588 1.5e-07 59.3 77 44.2
FAN20G1609 Fragaria x ananassa HOM05D007769 ORTHO05D009588 1.5e-07 59.3 91 49.5
Glyma.04G045900 Glycine max HOM05D015670 ORTHO05D009588 1.7e-06 55.8 73 50.7
Hma1.2p1_0819F.1_g223670 Hydrangea macrophylla HOM05D007769 ORTHO05D009588 2.8e-06 55.1 69 52.2
Mapoly0040s0100 Marchantia polymorpha HOM05D007769 ORTHO05D009588 6.3e-06 53.9 75 48.0


User provided reference genes

Program Settings