Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 6.2e-205 717.2 361 100.0
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 1.9e-166 589.3 365 85.5
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 6.3e-125 451.4 372 68.8
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 8.6e-114 414.5 374 64.7
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 2.6e-78 296.6 365 50.1
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 1.6e-72 277.3 370 51.1
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 3.4e-70 269.6 358 48.3
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 1.5e-62 244.2 373 44.2
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 8.4e-61 238.4 354 46.3
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 1.8e-50 204.1 389 38.6
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 3.1e-47 193.4 367 38.4
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 5.9e-46 189.1 389 36.8
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 4.2e-44 183.0 356 38.8
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 6.1e-43 179.1 376 35.6
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 1.5e-41 174.5 358 36.6
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 5.7e-41 172.6 368 38.6
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 7.4e-41 172.2 398 33.9
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 3.1e-39 166.8 366 34.4
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 3.1e-39 166.8 366 34.4
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 2.0e-38 164.1 388 32.2
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 2.5e-36 157.1 379 31.7
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 2.7e-35 153.7 374 35.3
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 1.8e-34 151.0 374 32.1
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 5.2e-34 149.4 376 31.9
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 4.4e-33 146.4 371 32.3
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 7.4e-33 145.6 393 32.3
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 1.7e-32 144.4 398 31.4
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 1.7e-32 144.4 368 31.0
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 2.2e-32 144.1 383 31.6
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 8.2e-32 142.1 361 31.3
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 4.1e-31 139.8 381 30.4
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 9.1e-31 138.7 380 29.5
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 2.6e-30 137.1 372 29.0
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 1.7e-29 134.4 375 29.9
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 3.8e-29 133.3 391 27.9
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.1e-28 131.7 381 30.7
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 1.1e-28 131.7 383 29.8
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 1.2e-27 128.3 367 31.3
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.1e-27 127.5 363 30.3
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 2.1e-27 127.5 371 30.5
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 6.1e-27 125.9 369 30.6
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 6.1e-27 125.9 355 31.3
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.3e-26 124.0 370 29.7
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.0e-25 120.9 354 32.2
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 2.6e-25 120.6 366 30.3
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 3.3e-25 120.2 397 30.7
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 3.3e-25 120.2 366 30.1
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.7e-24 117.9 374 28.3
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 8.2e-24 115.5 363 28.9
arahy.Tifrunner.gnm1.ann1.E4Y0Z3 Arachis hypogaea HOM05D032995 ORTHO05D031506 1.4e-23 114.8 363 32.0
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 1.8e-23 114.4 367 28.6
arahy.Tifrunner.gnm1.ann1.34G3CR Arachis hypogaea HOM05D032995 ORTHO05D031506 3.1e-23 113.6 359 33.1
arahy.Tifrunner.gnm1.ann1.I6QTPS Arachis hypogaea HOM05D032995 ORTHO05D031506 3.1e-23 113.6 359 32.9
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 4.1e-23 113.2 373 30.8
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 7.0e-23 112.5 409 29.6
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 9.1e-23 112.1 352 29.3
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 1.2e-22 111.7 357 28.3
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 2.7e-22 110.5 378 28.6
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 4.5e-22 109.8 365 30.7
arahy.Tifrunner.gnm1.ann1.0IC8QA Arachis hypogaea HOM05D006874 ORTHO05D008334 5.9e-22 109.4 327 32.7
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 5.9e-22 109.4 390 28.7
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 7.7e-22 109.0 357 28.0
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 2.2e-21 107.5 354 28.5
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 2.9e-21 107.1 379 29.3
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 3.8e-21 106.7 413 29.3
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 4.2e-20 103.2 366 27.9
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 5.5e-20 102.8 361 29.9
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 1.2e-19 101.7 360 28.3
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 2.7e-19 100.5 361 26.0
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 3.6e-19 100.1 361 26.0
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 4.7e-19 99.8 121 43.0
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.0e-18 98.6 363 27.3
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 1.8e-18 97.8 366 27.3
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 3.0e-18 97.1 301 33.2
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 4.0e-18 96.7 368 27.7
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.2e-18 96.3 360 25.6
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 4.4e-17 93.2 370 26.8
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 7.5e-17 92.4 372 29.6
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 1.3e-16 91.7 385 25.2
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 1.7e-16 91.3 392 26.8
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.1e-15 88.6 150 36.0
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 1.4e-15 88.2 357 23.0
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 2.4e-15 87.4 366 25.1
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 3.1e-15 87.0 369 26.8
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 9.1e-15 85.5 387 23.5
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.2e-14 85.1 153 32.7
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 3.5e-14 83.6 145 31.7
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 7.7e-14 82.4 372 23.9
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.9e-13 80.5 348 26.4
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 2.9e-13 80.5 364 24.2
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 3.8e-13 80.1 152 32.2
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 5.0e-13 79.7 348 27.0
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 5.0e-13 79.7 387 25.3
arahy.Tifrunner.gnm1.ann1.WJQ75P Arachis hypogaea HOM05D006874 ORTHO05D008334 6.5e-13 79.3 163 34.4
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 4.2e-12 76.6 341 25.5
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 7.2e-12 75.9 353 24.4
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 9.5e-12 75.5 356 23.9
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 1.6e-11 74.7 350 26.6
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 3.6e-11 73.6 155 30.3
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 4.7e-11 73.2 369 22.5
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.8e-10 71.2 367 23.4
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 1.8e-10 71.2 343 23.9
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 2.0e-09 67.8 370 24.9
TPR.G30198 Trifolium pratense HOM05D006874 ORTHO05D008334 2.0e-09 67.8 426 24.9
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 4.4e-09 66.6 150 29.3
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 1.3e-08 65.1 374 24.3
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 1.7e-08 64.7 377 23.3
COL.COLO4_28465 Corchorus olitorius HOM05D006874 ORTHO05D008334 6.3e-08 62.8 163 31.3
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.4e-07 61.6 371 24.0
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 1.8e-07 61.2 118 30.5
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.2e-06 58.5 144 34.0
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 1.6e-06 58.2 122 29.5


User provided reference genes

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