Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 8.6e-92 340.5 196 100.0
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 1.0e-68 263.8 178 87.6
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 5.1e-36 155.2 129 74.4
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 3.3e-35 152.5 144 66.0
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 6.2e-34 148.3 142 67.6
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 1.2e-32 144.1 129 72.1
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 2.6e-32 142.9 142 66.2
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 9.9e-32 141.0 122 74.6
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 2.9e-31 139.4 143 62.9
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 3.8e-31 139.0 103 80.6
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 3.8e-31 139.0 125 71.2
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 3.8e-31 139.0 108 79.6
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 4.9e-31 138.7 103 77.7
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 6.4e-31 138.3 110 74.5
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 8.4e-31 137.9 109 74.3
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 8.4e-31 137.9 116 75.0
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 1.4e-30 137.1 118 75.4
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.4e-30 137.1 103 83.5
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 1.4e-30 137.1 143 63.6
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.9e-30 136.7 110 74.5
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.9e-30 136.7 110 74.5
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 1.9e-30 136.7 125 72.8
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 2.5e-30 136.3 147 63.3
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 3.2e-30 136.0 127 66.1
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 4.2e-30 135.6 125 68.0
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 5.5e-30 135.2 105 81.0
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 5.5e-30 135.2 143 64.3
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 2.1e-29 133.3 103 80.6
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 2.7e-29 132.9 148 62.2
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 2.7e-29 132.9 133 64.7
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 3.5e-29 132.5 129 68.2
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 3.5e-29 132.5 103 81.6
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 4.6e-29 132.1 115 73.9
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 4.6e-29 132.1 131 67.9
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 7.9e-29 131.3 107 75.7
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 1.0e-28 131.0 108 76.9
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 1.8e-28 130.2 112 74.1
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 2.3e-28 129.8 105 77.1
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 2.3e-28 129.8 105 78.1
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 2.3e-28 129.8 105 77.1
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 3.0e-28 129.4 142 61.3
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 3.9e-28 129.0 103 76.7
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 5.1e-28 128.6 105 77.1
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 6.7e-28 128.3 135 48.9
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 6.7e-28 128.3 143 60.8
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 6.7e-28 128.3 103 78.6
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 8.7e-28 127.9 103 76.7
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 1.1e-27 127.5 103 73.8
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 1.1e-27 127.5 116 67.2
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 1.1e-27 127.5 143 60.1
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 1.5e-27 127.1 99 79.8
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 1.5e-27 127.1 99 79.8
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 1.5e-27 127.1 99 79.8
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 1.5e-27 127.1 105 77.1
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 1.5e-27 127.1 105 77.1
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 1.5e-27 127.1 105 77.1
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 1.5e-27 127.1 108 73.1
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.5e-27 127.1 119 65.5
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 1.5e-27 127.1 99 79.8
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 1.9e-27 126.7 121 69.4
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.5e-27 126.3 104 73.1
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.5e-27 126.3 104 73.1
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 2.5e-27 126.3 94 80.9
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 4.3e-27 125.6 105 76.2
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 4.3e-27 125.6 105 76.2
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 4.3e-27 125.6 113 65.5
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 5.6e-27 125.2 105 76.2
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 5.6e-27 125.2 142 58.5
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 5.6e-27 125.2 96 74.0
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 5.6e-27 125.2 123 67.5
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 7.4e-27 124.8 104 76.0
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 7.4e-27 124.8 114 71.1
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 7.4e-27 124.8 102 75.5
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 7.4e-27 124.8 101 79.2
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 9.6e-27 124.4 104 76.0
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 1.3e-26 124.0 103 75.7
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 2.1e-26 123.2 100 80.0
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 4.8e-26 122.1 108 73.1
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 6.2e-26 121.7 104 74.0
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 6.2e-26 121.7 116 68.1
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 8.2e-26 121.3 100 77.0
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.4e-25 120.6 118 68.6
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 1.8e-25 120.2 104 73.1
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.8e-25 120.2 100 78.0
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 1.8e-25 120.2 99 71.7
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 1.8e-25 120.2 99 71.7
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 2.4e-25 119.8 105 72.4
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 4.0e-25 119.0 117 65.8
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 6.9e-25 118.2 102 66.7
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 1.2e-24 117.5 122 63.9
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 5.8e-24 115.2 89 79.8
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 1.3e-23 114.0 97 76.3
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 4.9e-23 112.1 145 56.6
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 2.5e-22 109.8 67 71.6
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 7.1e-22 108.2 101 67.3
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 9.3e-22 107.8 90 57.8
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 9.3e-22 107.8 79 83.5
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 4.6e-21 105.5 92 71.7
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 7.9e-21 104.8 90 73.3
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 1.1e-19 100.9 93 67.7
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 2.2e-18 96.7 75 80.0
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 3.7e-18 95.9 75 80.0
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 4.1e-17 92.4 81 69.1
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 9.0e-17 91.3 75 72.0
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 2.9e-07 59.7 43 67.4


User provided reference genes

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