Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G221500 Glycine max HOM05D001145 ORTHO05D008176 1.7e-81 305.8 139 100.0
Glyma.06G060200 Glycine max HOM05D001145 ORTHO05D008176 3.6e-52 208.4 127 78.0
Glyma.04G059800 Glycine max HOM05D001145 ORTHO05D008176 1.0e-51 206.8 127 77.2
Ca_15787_v3 Cicer arietinum L. HOM05D001145 ORTHO05D008176 6.8e-51 204.1 127 75.6
TPR.G1896 Trifolium pratense HOM05D001145 ORTHO05D008176 1.2e-50 203.4 127 75.6
Lj1g0021239 Lotus japonicus HOM05D001145 ORTHO05D008176 7.5e-50 200.7 127 75.6
PGR044G1085 Punica granatum HOM05D001145 ORTHO05D008176 1.7e-49 199.5 127 74.0
Medtr3g105820 Medicago truncatula HOM05D001145 ORTHO05D008176 3.7e-49 198.4 127 74.0
Sc06g0000320 Simmondsia chinensis HOM05D001145 ORTHO05D008176 3.7e-49 198.4 127 74.0
arahy.Tifrunner.gnm1.ann1.ZP8Y56 Arachis hypogaea HOM05D001145 ORTHO05D008176 6.4e-49 197.6 127 73.2
Cpa.g.sc148.47 Carica papaya HOM05D001145 ORTHO05D008176 6.4e-49 197.6 127 72.4
arahy.Tifrunner.gnm1.ann1.VKSA8D Arachis hypogaea HOM05D001145 ORTHO05D008176 1.4e-48 196.4 127 72.4
Rhsim02G0217900 Rhododendron simsii HOM05D001145 ORTHO05D008176 1.4e-48 196.4 127 73.2
CSS0018677 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D008176 1.8e-48 196.1 127 71.7
CSS0043219 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D008176 1.8e-48 196.1 127 71.7
Phvul.009G086000 Phaseolus vulgaris HOM05D001145 ORTHO05D008176 1.8e-48 196.1 127 74.8
Duzib187G1480 Durio zibethinus HOM05D001145 ORTHO05D008176 2.4e-48 195.7 127 74.8
Eucgr.C04031 Eucalyptus grandis HOM05D001145 ORTHO05D008176 2.4e-48 195.7 127 71.7
Gohir.A05G060800 Gossypium hirsutum HOM05D001145 ORTHO05D008176 5.4e-48 194.5 127 72.4
Gohir.D05G063000 Gossypium hirsutum HOM05D001145 ORTHO05D008176 5.4e-48 194.5 127 72.4
Gorai.009G064000 Gossypium raimondii HOM05D001145 ORTHO05D008176 5.4e-48 194.5 127 72.4
Thecc.09G013700 Theobroma cacao HOM05D001145 ORTHO05D008176 5.4e-48 194.5 127 71.7
GSVIVG01036007001 Vitis vinifera HOM05D001145 ORTHO05D008176 7.0e-48 194.1 127 71.7
Lalb_Chr08g0244481 Lupinus albus HOM05D001145 ORTHO05D008176 9.2e-48 193.7 127 72.4
Rhsim02G0217800 Rhododendron simsii HOM05D001145 ORTHO05D008176 1.6e-47 193.0 127 71.7
Psat5g033120 Pisum sativum HOM05D001145 ORTHO05D008176 2.0e-47 192.6 127 73.2
vmacro11276 Vaccinium macrocarpon HOM05D001145 ORTHO05D008176 7.8e-47 190.7 127 71.7
TWI34G0371 Tripterygium wilfordii HOM05D001145 ORTHO05D008176 1.0e-46 190.3 127 69.3
Hma1.2p1_0392F.1_g142980 Hydrangea macrophylla HOM05D001145 ORTHO05D008176 1.7e-46 189.5 127 71.7
CiPaw.08G004400 Carya illinoinensis HOM05D001145 ORTHO05D008176 3.0e-46 188.7 127 69.3
Lsat_1_v5_gn_3_22540 Lactuca sativa HOM05D001145 ORTHO05D008176 3.9e-46 188.3 127 70.9
CiPaw.07G232800 Carya illinoinensis HOM05D001145 ORTHO05D008176 5.0e-46 188.0 127 69.3
Dinv16415 Davidia involucrata HOM05D001145 ORTHO05D008176 5.0e-46 188.0 127 71.7
ECA246G4066 Erigeron canadensis HOM05D001145 ORTHO05D008176 5.0e-46 188.0 127 70.1
VMungo1309G0760 Vigna mungo HOM05D001145 ORTHO05D008176 6.6e-46 187.6 128 71.9
Ciclev10007965m.g Citrus clementina HOM05D001145 ORTHO05D008176 8.6e-46 187.2 128 71.9
Manes.16G132300 Manihot esculenta HOM05D001145 ORTHO05D008176 1.5e-45 186.4 127 68.5
CANSAT25G1628 Cannabis sativa HOM05D001145 ORTHO05D008176 1.9e-45 186.0 128 70.3
AUR62032447 Chenopodium quinoa HOM05D001145 ORTHO05D008176 1.9e-45 186.0 127 69.3
Lj7A738T100 Lonicera japonica HOM05D001145 ORTHO05D008176 1.9e-45 186.0 127 71.7
Atru.BG.19.p Acer truncatum HOM05D001145 ORTHO05D008176 3.3e-45 185.3 127 70.1
Hund02973 Selenicereus undatus HOM05D001145 ORTHO05D008176 5.6e-45 184.5 127 68.5
AUR62024771 Chenopodium quinoa HOM05D001145 ORTHO05D008176 9.5e-45 183.7 127 68.5
Actinidia06455 Actinidia chinensis HOM05D001145 ORTHO05D008176 1.6e-44 183.0 127 69.3
QL02p018077 Quercus lobata HOM05D001145 ORTHO05D008176 1.6e-44 183.0 127 66.9
EL10Ac2g02451 Beta vulgaris HOM05D001145 ORTHO05D008176 2.8e-44 182.2 127 68.5
HanXRQChr17g0536341 Helianthus annuus HOM05D001145 ORTHO05D008176 3.6e-44 181.8 127 70.9
THA.LOC104803608 Tarenaya hassleriana HOM05D001145 ORTHO05D008176 4.7e-44 181.4 127 68.5
Ah.12g060390 Amaranthus hybridus HOM05D001145 ORTHO05D008176 8.0e-44 180.6 127 66.9
Cfa013013 Carpinus fangiana HOM05D001145 ORTHO05D008176 8.0e-44 180.6 127 68.5
RcHm_v2.0_Chr6g0299151 Rosa chinensis HOM05D001145 ORTHO05D008176 8.0e-44 180.6 128 70.3
Nn2g12480 Nelumbo nucifera HOM05D001145 ORTHO05D008176 1.4e-43 179.9 127 69.3
FAN27G3317 Fragaria x ananassa HOM05D001145 ORTHO05D008176 1.8e-43 179.5 130 69.2
FvH4_2g41330 Fragaria vesca HOM05D001145 ORTHO05D008176 2.3e-43 179.1 130 69.2
PSO782G5236 Papaver somniferum HOM05D001145 ORTHO05D008176 2.3e-43 179.1 127 68.5
PSO063G6900 Papaver somniferum HOM05D001145 ORTHO05D008176 3.1e-43 178.7 127 68.5
Prupe.1G397100 Prunus persica HOM05D001145 ORTHO05D008176 3.1e-43 178.7 127 68.5
Aqoxy7G03277 Aquilegia oxysepala HOM05D001145 ORTHO05D008176 4.0e-43 178.3 128 69.5
Actinidia22279 Actinidia chinensis HOM05D001145 ORTHO05D008176 6.8e-43 177.6 127 66.9
FAN15G1263 Fragaria x ananassa HOM05D001145 ORTHO05D008176 6.8e-43 177.6 130 68.5
Sp4g03840 Schrenkiella parvula HOM05D001145 ORTHO05D008176 6.8e-43 177.6 127 70.1
DCAR_004584 Daucus carota HOM05D001145 ORTHO05D008176 8.9e-43 177.2 128 68.0
Carub.0004s0444 Capsella rubella HOM05D001145 ORTHO05D008176 1.2e-42 176.8 127 69.3
AT2G24820 Arabidopsis thaliana HOM05D001145 ORTHO05D008176 1.5e-42 176.4 127 69.3
Oeu048541.1 Olea europaea HOM05D001145 ORTHO05D008176 2.0e-42 176.0 131 66.4
BcaB01g03000 Brassica carinata HOM05D001145 ORTHO05D008176 2.6e-42 175.6 127 69.3
A03p26990 Brassica napus HOM05D001145 ORTHO05D008176 2.6e-42 175.6 127 69.3
C03p32390 Brassica napus HOM05D001145 ORTHO05D008176 2.6e-42 175.6 127 69.3
BolC3t15580H Brassica oleracea HOM05D001145 ORTHO05D008176 2.6e-42 175.6 127 69.3
BraA03t11910Z Brassica rapa HOM05D001145 ORTHO05D008176 2.6e-42 175.6 127 69.3
Nitab4.5_0001110g0090 Nicotiana tabacum HOM05D001145 ORTHO05D008176 2.6e-42 175.6 131 67.2
AL4G15860 Arabidopsis lyrata HOM05D001145 ORTHO05D008176 3.4e-42 175.3 127 68.5
Cc08_g06700 Coffea canephora HOM05D001145 ORTHO05D008176 4.4e-42 174.9 131 65.6
Sed0027737 Sechium edule HOM05D001145 ORTHO05D008176 5.8e-42 174.5 127 67.7
Thhalv10000113m.g Eutrema salsugineum HOM05D001145 ORTHO05D008176 1.3e-41 173.3 127 69.3
Sopen12g032380 Solanum pennellii HOM05D001145 ORTHO05D008176 1.3e-41 173.3 131 65.6
PGSC0003DMG401029274 Solanum tuberosum HOM05D001145 ORTHO05D008176 1.3e-41 173.3 131 65.6
CAN.G566.49 Capsicum annuum HOM05D001145 ORTHO05D008176 1.7e-41 172.9 131 65.6
Migut.A00391 Erythranthe guttata HOM05D001145 ORTHO05D008176 2.9e-41 172.2 131 68.7
Solyc12g096550.2 Solanum lycopersicum HOM05D001145 ORTHO05D008176 2.9e-41 172.2 131 64.9
Nitab4.5_0000668g0080 Nicotiana tabacum HOM05D001145 ORTHO05D008176 3.7e-41 171.8 131 65.6
Ciclev10007702m.g Citrus clementina HOM05D001145 ORTHO05D008176 8.3e-41 170.6 128 67.2
TAR626G1257 Trochodendron aralioides HOM05D001145 ORTHO05D008176 1.4e-40 169.9 127 63.8
Peaxi162Scf00459g00119 Petunia axillaris HOM05D001145 ORTHO05D008176 2.4e-40 169.1 131 64.1
Sabra18G0019000 Salix brachista HOM05D001145 ORTHO05D008176 3.2e-40 168.7 127 63.0
TWI32G0797 Tripterygium wilfordii HOM05D001145 ORTHO05D008176 7.0e-40 167.5 127 59.8
Aa31LG7G11580 Aethionema arabicum HOM05D001145 ORTHO05D008176 9.2e-40 167.2 127 66.9
Potri.018G015700 Populus trichocarpa HOM05D001145 ORTHO05D008176 1.2e-39 166.8 127 62.2
CARHR294570 Cardamine hirsuta HOM05D001145 ORTHO05D008176 2.0e-39 166.0 127 66.9
ClCG05G016090 Citrullus lanatus HOM05D001145 ORTHO05D008176 2.7e-39 165.6 127 64.6
Potri.006G267300 Populus trichocarpa HOM05D001145 ORTHO05D008176 2.7e-39 165.6 127 62.2
Sabra06G0209600 Salix brachista HOM05D001145 ORTHO05D008176 2.7e-39 165.6 127 62.2
CDE07G1427 Ceratophyllum demersum HOM05D000821 ORTHO05D008176 3.5e-39 165.2 127 64.6
Os02g0792800 Oryza sativa ssp. japonica HOM05D001145 ORTHO05D008176 7.8e-39 164.1 127 62.2
ATR0580G386 Amborella trichopoda HOM05D001145 ORTHO05D008176 1.3e-38 163.3 127 64.6
MELO3C016944.2 Cucumis melo HOM05D001145 ORTHO05D008176 1.3e-38 163.3 127 63.0
COL.COLO4_18970 Corchorus olitorius HOM05D001145 ORTHO05D008176 3.9e-38 161.8 99 75.8
SalBow4G1746 Salvia bowleyana HOM05D001145 ORTHO05D008176 4.3e-37 158.3 131 61.1
unitig_0.g2818 Utricularia gibba HOM05D002170 ORTHO05D005003 4.3e-37 158.3 131 60.3
Zm00001eb257630 Zea mays HOM05D001145 ORTHO05D008176 4.3e-37 158.3 127 62.2
CsaV3_4G036370 Cucumis sativus L. HOM05D001145 ORTHO05D008176 9.5e-37 157.1 127 61.4
Prupe.1G397200 Prunus persica HOM05D001145 ORTHO05D008176 9.5e-37 157.1 127 60.6
CSS0007167 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D008176 2.8e-36 155.6 127 63.0
CSS0034347 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D008176 2.8e-36 155.6 127 63.0
CDE04G1965 Ceratophyllum demersum HOM05D001145 ORTHO05D008176 3.6e-36 155.2 127 62.2
SGA_v2.0_scaffold27G11633 Striga asiatica HOM05D001145 ORTHO05D008176 4.7e-36 154.8 132 62.9
MBI15_g07484_MAGBIO Magnolia biondii HOM05D001145 ORTHO05D008176 8.1e-36 154.1 127 63.0
HPP92_017165 Vanilla planifolia HOM05D001145 ORTHO05D008176 8.1e-36 154.1 127 61.4
MD08G1051400 Malus domestica HOM05D001145 ORTHO05D008176 3.7e-33 145.2 127 57.5
AagrBONN_evm.TU.Sc2ySwM_344.3366 Anthoceros agrestis HOM05D001145 ORTHO05D008176 5.6e-29 131.3 127 52.0
Pp3c11_12710 Physcomitrium patens HOM05D001145 ORTHO05D008176 3.1e-27 125.6 127 51.2
Pp3c7_15550 Physcomitrium patens HOM05D001145 ORTHO05D008176 2.6e-26 122.5 127 49.6
AUR62025751 Chenopodium quinoa HOM05D001145 ORTHO05D008176 6.8e-19 97.8 65 69.2
Mapoly0030s0137 Marchantia polymorpha HOM05D001145 ORTHO05D008176 2.2e-17 92.8 132 43.2
Mapoly0030s0036 Marchantia polymorpha HOM05D001145 ORTHO05D008176 2.4e-16 89.4 133 40.6
CBR_g3534 Chara braunii HOM05D001145 ORTHO05D008176 1.2e-07 60.5 136 30.9
Mapoly0028s0113 Marchantia polymorpha HOM05D001145 ORTHO05D001415 2.3e-06 56.2 138 30.4


User provided reference genes

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