Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G201600 Glycine max HOM05D006422 ORTHO05D007992 2.8e-126 455.3 232 100.0
Phvul.001G058000 Phaseolus vulgaris HOM05D006422 ORTHO05D007992 2.8e-97 359.0 217 86.6
VMungo0647G2190 Vigna mungo HOM05D006422 ORTHO05D007992 1.5e-95 353.2 217 86.2
Lj5g0012981 Lotus japonicus HOM05D006422 ORTHO05D007992 3.7e-86 322.0 219 76.7
Ca_12880_v3 Cicer arietinum L. HOM05D006422 ORTHO05D007992 2.5e-82 309.3 222 74.8
TPR.G11997 Trifolium pratense HOM05D006422 ORTHO05D007992 1.2e-81 307.0 220 73.6
arahy.Tifrunner.gnm1.ann1.43EIBT Arachis hypogaea HOM05D006422 ORTHO05D007992 8.0e-81 304.3 222 71.2
Medtr1g009980 Medicago truncatula HOM05D006422 ORTHO05D007992 1.1e-80 303.9 224 72.3
Lalb_Chr14g0362181 Lupinus albus HOM05D006422 ORTHO05D007992 8.9e-80 300.8 196 76.5
Psat6g032000 Pisum sativum HOM05D006422 ORTHO05D007992 2.6e-79 299.3 223 71.7
arahy.Tifrunner.gnm1.ann1.D9GJPD Arachis hypogaea HOM05D006422 ORTHO05D007992 5.8e-79 298.1 222 69.8
Cfa013253 Carpinus fangiana HOM05D006422 ORTHO05D007992 1.0e-75 287.3 206 71.4
Thecc.09G005200 Theobroma cacao HOM05D006422 ORTHO05D007992 8.6e-75 284.3 218 66.5
Atru.chr7.2615_Atru.chr7.2616 Acer truncatum HOM05D006422 ORTHO05D007992 3.6e-73 278.9 198 71.2
Duzib168G1765 Durio zibethinus HOM05D006422 ORTHO05D007992 3.6e-73 278.9 218 63.3
GSVIVG01035544001 Vitis vinifera HOM05D006422 ORTHO05D007992 6.2e-73 278.1 218 65.6
PGR042G1463 Punica granatum HOM05D006422 ORTHO05D007992 1.8e-72 276.6 225 64.0
Ciclev10009324m.g Citrus clementina HOM05D006422 ORTHO05D007992 1.5e-71 273.5 182 74.2
Manes.16G136400 Manihot esculenta HOM05D006422 ORTHO05D007992 2.6e-71 272.7 220 66.8
CiPaw.07G214400 Carya illinoinensis HOM05D006422 ORTHO05D007992 9.9e-71 270.8 173 75.7
Dinv10868 Davidia involucrata HOM05D006422 ORTHO05D007992 6.4e-70 268.1 185 73.0
Dinv26550 Davidia involucrata HOM05D006422 ORTHO05D007992 6.4e-70 268.1 185 73.0
TWI34G0909 Tripterygium wilfordii HOM05D006422 ORTHO05D007992 1.1e-69 267.3 222 67.1
Sabra06G0214100 Salix brachista HOM05D006422 ORTHO05D007992 2.4e-69 266.2 171 76.6
FAN24G2382 Fragaria x ananassa HOM05D006422 ORTHO05D007992 3.2e-69 265.8 224 60.3
MD15G1109900 Malus domestica HOM05D006422 ORTHO05D007992 3.2e-69 265.8 173 73.4
QL12p024696 Quercus lobata HOM05D006422 ORTHO05D007992 4.1e-69 265.4 237 60.3
COL.COLO4_18610 Corchorus olitorius HOM05D006422 ORTHO05D007992 5.4e-69 265.0 228 61.4
FvH4_2g30680 Fragaria vesca HOM05D006422 ORTHO05D007992 7.1e-69 264.6 224 60.3
Prupe.1G462100 Prunus persica HOM05D006422 ORTHO05D007992 9.2e-69 264.2 227 60.8
RcHm_v2.0_Chr6g0312201 Rosa chinensis HOM05D006422 ORTHO05D007992 9.2e-69 264.2 224 60.7
Eucgr.C02103 Eucalyptus grandis HOM05D006422 ORTHO05D007992 1.6e-68 263.5 198 68.7
CANSAT25G0758 Cannabis sativa HOM05D006422 ORTHO05D007992 2.1e-68 263.1 220 63.2
Potri.006G276400 Populus trichocarpa HOM05D006422 ORTHO05D007992 3.5e-68 262.3 174 74.1
Thhalv10014537m.g Eutrema salsugineum HOM05D006422 ORTHO05D007992 6.0e-68 261.5 223 59.6
AL6G31470 Arabidopsis lyrata HOM05D006422 ORTHO05D007992 1.3e-67 260.4 223 59.6
Migut.A00443 Erythranthe guttata HOM05D006422 ORTHO05D007992 1.3e-67 260.4 221 60.6
CAN.G1364.3 Capsicum annuum HOM05D006422 ORTHO05D007992 3.0e-67 259.2 203 64.5
A10p19790 Brassica napus HOM05D006422 ORTHO05D007992 3.9e-67 258.8 214 62.1
BraA10t44055Z Brassica rapa HOM05D006422 ORTHO05D007992 3.9e-67 258.8 214 62.1
Cc04_g09430 Coffea canephora HOM05D006422 ORTHO05D007992 3.9e-67 258.8 218 64.2
A03p09710 Brassica napus HOM05D006422 ORTHO05D007992 5.1e-67 258.5 220 59.5
BraA03t10287Z Brassica rapa HOM05D006422 ORTHO05D007992 5.1e-67 258.5 220 59.5
BcaB01g04822 Brassica carinata HOM05D006422 ORTHO05D007992 6.6e-67 258.1 219 60.7
C03p11290 Brassica napus HOM05D006422 ORTHO05D007992 6.6e-67 258.1 219 60.7
BcaB01g04848 Brassica carinata HOM05D006422 ORTHO05D007992 8.6e-67 257.7 220 60.0
AT5G19940 Arabidopsis thaliana HOM05D006422 ORTHO05D007992 1.1e-66 257.3 222 58.6
BolC3t13599H Brassica oleracea HOM05D006422 ORTHO05D007992 1.1e-66 257.3 220 59.5
BcaB08g36552 Brassica carinata HOM05D006422 ORTHO05D007992 1.5e-66 256.9 222 60.8
CARHR192910 Cardamine hirsuta HOM05D006422 ORTHO05D007992 1.5e-66 256.9 223 57.8
PGSC0003DMG400009533 Solanum tuberosum HOM05D006422 ORTHO05D007992 2.5e-66 256.1 222 60.4
Carub.0006s1831 Capsella rubella HOM05D006422 ORTHO05D007992 3.3e-66 255.8 223 58.7
Nn1g01726 Nelumbo nucifera HOM05D006422 ORTHO05D007992 5.6e-66 255.0 209 63.2
Sp6g24440 Schrenkiella parvula HOM05D006422 ORTHO05D007992 5.6e-66 255.0 223 58.7
Sopen08g002130 Solanum pennellii HOM05D006422 ORTHO05D007992 9.5e-66 254.2 219 63.9
THA.LOC104811048 Tarenaya hassleriana HOM05D006422 ORTHO05D007992 9.5e-66 254.2 226 58.4
AUR62020627 Chenopodium quinoa HOM05D006422 ORTHO05D007992 1.2e-65 253.8 227 61.7
PSO170G4757 Papaver somniferum HOM05D006422 ORTHO05D007992 1.2e-65 253.8 195 66.7
FAN27G3442 Fragaria x ananassa HOM05D006422 ORTHO05D007992 1.6e-65 253.4 225 58.7
Gohir.D06G108900 Gossypium hirsutum HOM05D006422 ORTHO05D007992 1.6e-65 253.4 218 62.4
BcaC04g19400 Brassica carinata HOM05D006422 ORTHO05D007992 2.1e-65 253.1 224 58.0
C09p56110 Brassica napus HOM05D006422 ORTHO05D007992 2.1e-65 253.1 224 58.0
BolC9t58478H Brassica oleracea HOM05D006422 ORTHO05D007992 2.1e-65 253.1 224 58.0
Solyc08g006160.4 Solanum lycopersicum HOM05D006422 ORTHO05D007992 2.1e-65 253.1 223 62.3
TAR383G0184 Trochodendron aralioides HOM05D006422 ORTHO05D007992 2.8e-65 252.7 196 64.3
Gorai.010G123700 Gossypium raimondii HOM05D006422 ORTHO05D007992 3.6e-65 252.3 218 61.9
FAN20G1184 Fragaria x ananassa HOM05D006422 ORTHO05D007992 4.7e-65 251.9 219 58.9
PSO017G3510 Papaver somniferum HOM05D006422 ORTHO05D007992 4.7e-65 251.9 193 67.4
Sc09g0007930 Simmondsia chinensis HOM05D006422 ORTHO05D007992 6.2e-65 251.5 219 59.8
Aa31LG9G9500 Aethionema arabicum HOM05D006422 ORTHO05D007992 3.1e-64 249.2 217 57.1
HPP92_004705 Vanilla planifolia HOM05D006422 ORTHO05D007992 3.1e-64 249.2 175 69.1
Hma1.2p1_0534F.1_g173720 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 4.0e-64 248.8 206 63.1
CDE04G2326 Ceratophyllum demersum HOM05D006422 ORTHO05D007992 6.8e-64 248.1 220 60.9
Gohir.A06G106700 Gossypium hirsutum HOM05D006422 ORTHO05D007992 6.8e-64 248.1 222 61.7
Actinidia03579 Actinidia chinensis HOM05D006422 ORTHO05D007992 9.9e-63 244.2 173 68.8
Nitab4.5_0000025g0080 Nicotiana tabacum HOM05D006422 ORTHO05D007992 2.2e-62 243.0 235 57.9
MSTRG.11814 Avicennia marina HOM05D006422 ORTHO05D007992 2.9e-62 242.7 200 63.0
Aqoxy5G03915 Aquilegia oxysepala HOM05D006422 ORTHO05D007992 3.8e-62 242.3 209 63.2
Peaxi162Scf00045g01530 Petunia axillaris HOM05D006422 ORTHO05D007992 1.4e-61 240.4 223 57.4
Haze_21696 Corylus avellana HOM05D006422 ORTHO05D007992 9.2e-61 237.7 143 79.0
unitig_748.g7381 Utricularia gibba HOM05D006422 ORTHO05D007992 9.2e-61 237.7 211 60.2
EL10Ac2g03719 Beta vulgaris HOM05D006422 ORTHO05D007992 2.1e-60 236.5 244 57.0
Rhsim07G0170200 Rhododendron simsii HOM05D006422 ORTHO05D007992 3.5e-60 235.7 200 60.5
MBI13_g31531_MAGBIO Magnolia biondii HOM05D006422 ORTHO05D007992 4.6e-60 235.3 157 72.0
ATR0626G032 Amborella trichopoda HOM05D006422 ORTHO05D007992 2.3e-59 233.0 197 60.4
SGA_v2.0_scaffold27G11666 Striga asiatica HOM05D006422 ORTHO05D007992 3.0e-59 232.6 219 58.9
AUR62038756 Chenopodium quinoa HOM05D006422 ORTHO05D007992 3.9e-59 232.3 147 75.5
Lsat_1_v5_gn_5_61061 Lactuca sativa HOM05D006422 ORTHO05D007992 3.9e-59 232.3 233 55.8
DCAR_003025 Daucus carota HOM05D006422 ORTHO05D007992 6.6e-59 231.5 158 70.9
Nitab4.5_0003259g0070 Nicotiana tabacum HOM05D006422 ORTHO05D007992 1.1e-58 230.7 195 62.1
HanXRQChr13g0412481 Helianthus annuus HOM05D006422 ORTHO05D007992 3.3e-58 229.2 230 53.9
FAN15G3645 Fragaria x ananassa HOM05D006422 ORTHO05D007992 2.1e-57 226.5 239 51.5
ECA240G0283 Erigeron canadensis HOM05D000069 ORTHO05D000060 3.6e-57 225.7 192 57.8
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 1.4e-56 223.8 228 55.7
Oeu018400.2 Olea europaea HOM05D006422 ORTHO05D007992 3.4e-55 219.2 146 71.2
vmacro05107 Vaccinium macrocarpon HOM05D006422 ORTHO05D007992 5.8e-55 218.4 149 68.5
Zm00001eb071430 Zea mays HOM05D006422 ORTHO05D007992 2.9e-54 216.1 219 56.6
Os04g0607000 Oryza sativa ssp. japonica HOM05D006422 ORTHO05D007992 1.9e-53 213.4 214 57.5
CiPaw.08G017800 Carya illinoinensis HOM05D006422 ORTHO05D007992 3.0e-51 206.1 206 58.3
MELO3C011201.2 Cucumis melo HOM05D006422 ORTHO05D007992 3.9e-51 205.7 129 76.7
SEGI_33970 Sequoiadendron giganteum HOM05D006422 ORTHO05D007992 4.2e-45 185.7 176 50.0
Hma1.2p1_0534F.1_g173730 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 1.6e-44 183.7 163 61.3
Ah.11g043920 Amaranthus hybridus HOM05D006422 ORTHO05D007992 2.3e-43 179.9 190 53.2
CSS0034711 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 1.1e-42 177.6 143 62.2
CSS0017479 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 8.1e-41 171.4 124 67.7
Lj7A749G60 Lonicera japonica HOM05D006422 ORTHO05D007992 1.1e-40 171.0 105 73.3
Pp3c13_4790 Physcomitrium patens HOM05D006422 ORTHO05D007992 3.2e-37 159.5 174 43.1
AagrBONN_evm.TU.Sc2ySwM_228.4709 Anthoceros agrestis HOM05D006422 ORTHO05D007992 4.2e-37 159.1 155 47.7
SMO364G0843 Selaginella moellendorffii HOM05D006422 ORTHO05D007992 7.1e-37 158.3 148 51.4
Mapoly0021s0119 Marchantia polymorpha HOM05D006422 ORTHO05D007992 1.0e-35 154.5 199 42.7
Gorai.002G101300 Gossypium raimondii HOM05D006422 ORTHO05D007992 4.2e-29 132.5 93 69.9
CSS0035518 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 3.5e-28 129.4 109 59.6
CBR_g3792 Chara braunii HOM05D006422 ORTHO05D007992 2.1e-20 103.6 158 36.7
Oeu014126.1 Olea europaea HOM05D006422 ORTHO05D007992 5.7e-18 95.5 76 63.2
Hund19396 Selenicereus undatus HOM05D006422 ORTHO05D007992 1.8e-16 90.5 99 53.5
Cre07.g325736 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 5.5e-13 79.0 222 25.2
MCO15G093 Micromonas commoda HOM05D006422 ORTHO05D007992 1.7e-09 67.4 185 27.6


User provided reference genes

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