Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 2.6e-144 515.4 263 100.0
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 8.4e-127 457.2 262 87.0
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 1.6e-122 443.0 263 85.9
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 1.5e-120 436.4 263 82.9
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 3.5e-117 425.2 264 81.8
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 1.1e-115 420.2 264 81.1
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 1.8e-113 412.9 263 79.1
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 5.3e-113 411.4 263 78.7
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 7.6e-112 407.5 263 79.5
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 5.0e-111 404.8 263 77.2
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 6.5e-111 404.4 262 78.2
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 3.4e-96 355.5 250 71.2
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 5.9e-96 354.8 253 70.0
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 7.7e-96 354.4 250 71.2
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 3.6e-93 345.5 250 68.8
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 3.9e-92 342.0 249 69.9
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 1.1e-91 340.5 262 65.6
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 4.4e-91 338.6 250 69.6
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 9.7e-91 337.4 250 68.4
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 8.2e-90 334.3 249 67.1
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 5.3e-89 331.6 241 68.5
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 9.1e-89 330.9 251 68.1
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 2.0e-88 329.7 250 65.6
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 1.0e-87 327.4 250 66.8
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 2.2e-87 326.2 248 66.5
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 6.5e-87 324.7 229 70.7
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 9.4e-86 320.9 250 65.2
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 1.2e-85 320.5 253 66.0
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 2.1e-85 319.7 263 62.4
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 2.7e-85 319.3 249 65.1
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 2.7e-85 319.3 247 64.0
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 4.7e-85 318.5 250 66.8
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 6.1e-85 318.2 263 62.4
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 1.8e-84 316.6 263 62.7
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 1.8e-84 316.6 250 65.6
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 2.6e-83 312.8 246 64.2
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 7.5e-83 311.2 251 65.3
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 1.3e-82 310.5 260 61.9
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 2.2e-82 309.7 264 62.1
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 4.8e-82 308.5 261 62.5
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 1.4e-81 307.0 292 57.2
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 2.4e-81 306.2 249 61.8
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 5.3e-81 305.1 239 66.1
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 9.1e-81 304.3 250 60.4
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 7.7e-80 301.2 229 66.8
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 2.2e-79 299.7 250 61.6
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 3.8e-79 298.9 261 59.4
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.2e-78 295.8 263 60.1
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 9.4e-78 294.3 263 60.1
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 1.6e-77 293.5 250 57.6
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 2.1e-77 293.1 249 59.0
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 2.1e-77 293.1 248 59.3
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 6.1e-77 291.6 251 61.4
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 1.0e-76 290.8 218 67.4
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.0e-76 290.8 263 59.7
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 1.4e-76 290.4 241 60.6
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 1.8e-76 290.0 250 56.8
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 2.0e-75 286.6 228 63.6
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 2.0e-75 286.6 249 59.8
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 2.6e-75 286.2 250 56.8
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 7.5e-75 284.6 248 58.5
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 9.8e-75 284.3 240 62.1
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 2.2e-74 283.1 230 65.2
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 2.2e-74 283.1 260 56.2
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 2.8e-74 282.7 240 62.1
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 8.3e-74 281.2 250 60.0
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 1.8e-73 280.0 260 55.8
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 9.1e-73 277.7 252 58.3
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 9.1e-73 277.7 242 60.3
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 1.0e-71 274.2 252 56.0
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 1.0e-71 274.2 252 54.8
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 1.7e-71 273.5 252 56.3
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 3.8e-71 272.3 203 67.0
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 6.5e-71 271.6 260 54.6
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 1.5e-70 270.4 252 55.6
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 3.2e-70 269.2 247 54.7
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 3.2e-70 269.2 247 54.7
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 3.2e-70 269.2 247 54.7
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 4.2e-70 268.9 247 55.1
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 4.2e-70 268.9 247 55.1
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 2.1e-69 266.5 246 54.9
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 1.0e-68 264.2 252 54.0
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 5.2e-68 261.9 252 54.0
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 5.2e-68 261.9 252 54.0
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 8.9e-68 261.2 231 57.1
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 2.4e-65 253.1 252 53.6
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 7.0e-65 251.5 277 48.0
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 9.2e-65 251.1 248 55.6
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 1.0e-63 247.7 249 55.4
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 1.3e-63 247.3 258 53.9
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 1.9e-62 243.4 231 54.5
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 6.1e-61 238.4 251 50.6
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 2.6e-59 233.0 249 52.2
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 1.1e-57 227.6 186 61.3
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 2.4e-57 226.5 326 43.9
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 2.7e-56 223.0 188 59.6
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 9.5e-54 214.5 224 53.1
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 8.0e-53 211.5 177 63.3
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 3.1e-52 209.5 260 47.3
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 7.5e-51 204.9 169 58.0
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 8.1e-45 184.9 149 61.1
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 9.2e-41 171.4 137 65.7
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 1.8e-36 157.1 247 40.9
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 4.9e-34 149.1 110 68.2
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 1.9e-33 147.1 136 54.4
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.6e-29 134.0 116 58.6
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.6e-29 134.0 116 58.6
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 4.2e-25 119.4 206 39.8
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 3.9e-23 112.8 89 59.6
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 2.8e-21 106.7 129 50.4
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 8.1e-21 105.1 154 38.3
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.2e-19 101.3 92 57.6
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 9.9e-19 98.2 223 27.4
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 6.4e-18 95.5 94 51.1
QL09p008974 Quercus lobata HOM05D006609 ORTHO05D008551 2.1e-13 80.5 71 62.0
Haze_26101 Corylus avellana HOM05D006609 ORTHO05D008551 5.8e-11 72.4 122 34.4
arahy.Tifrunner.gnm1.ann1.WH0W9H Arachis hypogaea HOM05D006609 ORTHO05D008551 1.3e-10 71.2 51 68.6
Cre10.g426400 Chlamydomonas reinhardtii HOM05D006609 ORTHO05D008551 4.9e-10 69.3 230 27.4
FvH4_5g31640 Fragaria vesca HOM05D006609 ORTHO05D046171 9.6e-06 55.1 62 46.8


User provided reference genes

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