Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G185500 Glycine max HOM05D008163 ORTHO05D010305 8.0e-45 183.3 90 100.0
Lalb_Chr00c21g0405831 Lupinus albus HOM05D008163 ORTHO05D010305 7.8e-40 166.8 89 91.0
Nn1g09991 Nelumbo nucifera HOM05D008163 ORTHO05D010305 5.0e-39 164.1 89 89.9
Nn1g10091 Nelumbo nucifera HOM05D008163 ORTHO05D010305 5.0e-39 164.1 89 89.9
Hma1.2p1_0136F.1_g062003 Hydrangea macrophylla HOM05D008163 ORTHO05D010305 3.4e-35 151.4 81 91.4
Solyc11g063600.3 Solanum lycopersicum HOM05D008163 ORTHO05D010305 2.5e-30 135.2 83 81.9
TPR.G20554 Trifolium pratense HOM05D008163 ORTHO05D010305 4.3e-30 134.4 78 83.3
Nitab4.5_0000592g0150 Nicotiana tabacum HOM05D008163 ORTHO05D010305 4.4e-27 124.4 77 77.9
Nitab4.5_0001702g0010 Nicotiana tabacum HOM05D011509 ORTHO05D010305 5.4e-25 117.5 66 84.8
Nitab4.5_0001127g0310 Nicotiana tabacum HOM05D008163 ORTHO05D010305 9.2e-25 116.7 76 75.0
Nitab4.5_0000161g0030 Nicotiana tabacum HOM05D008163 ORTHO05D010305 2.1e-24 115.5 81 70.4
Nitab4.5_0000172g1360 Nicotiana tabacum HOM05D008163 ORTHO05D010305 2.3e-23 112.1 68 80.9
SalBow1G5351 Salvia bowleyana HOM05D008163 ORTHO05D010305 1.2e-21 106.3 61 80.3
SalBow1G7817 Salvia bowleyana HOM05D008163 ORTHO05D010305 1.2e-21 106.3 61 80.3
MD15G1374400 Malus domestica HOM05D008163 ORTHO05D010305 5.2e-20 100.9 80 62.5
Potri.007G072900 Populus trichocarpa HOM05D008163 ORTHO05D010305 8.4e-18 93.6 80 60.0
MD12G1044600 Malus domestica HOM05D008163 ORTHO05D010305 2.4e-17 92.0 66 68.2
Prupe.7G030100 Prunus persica HOM05D008163 ORTHO05D010305 5.4e-17 90.9 67 70.1
Sabra07G0061500 Salix brachista HOM05D008163 ORTHO05D010305 1.6e-16 89.4 79 58.2
Sabra15G0022500 Salix brachista HOM05D008163 ORTHO05D010305 1.6e-16 89.4 79 58.2
Prupe.4G282300 Prunus persica HOM05D008163 ORTHO05D010305 4.6e-16 87.8 67 67.2
Nitab4.5_0004300g0280 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.3e-15 86.3 74 68.9
Carub.0003s2247 Capsella rubella HOM05D008163 ORTHO05D010305 3.0e-15 85.1 75 54.7
Aa31LG8G8870 Aethionema arabicum HOM05D008163 ORTHO05D010305 5.1e-15 84.3 74 56.8
CARHR098200 Cardamine hirsuta HOM05D008163 ORTHO05D010305 8.7e-15 83.6 75 56.0
AL3G36570 Arabidopsis lyrata HOM05D008163 ORTHO05D010305 1.1e-14 83.2 75 54.7
AUR62036216 Chenopodium quinoa HOM05D008163 ORTHO05D010305 1.5e-14 82.8 67 61.2
EL10Ac8g20156 Beta vulgaris HOM05D008163 ORTHO05D010305 5.6e-14 80.9 67 61.2
Thhalv10021368m.g Eutrema salsugineum HOM05D008163 ORTHO05D010305 5.6e-14 80.9 75 52.0
AUR62012772 Chenopodium quinoa HOM05D008163 ORTHO05D010305 7.3e-14 80.5 61 65.6
AUR62021886 Chenopodium quinoa HOM05D008163 ORTHO05D010305 9.6e-14 80.1 61 63.9
AT3G22300 Arabidopsis thaliana HOM05D008163 ORTHO05D010305 1.2e-13 79.7 75 53.3
A03p42710 Brassica napus HOM05D008163 ORTHO05D010305 1.6e-13 79.3 76 51.3
Hund21444 Selenicereus undatus HOM05D008163 ORTHO05D010305 1.6e-13 79.3 67 61.2
Zm00001eb056700 Zea mays HOM05D008163 ORTHO05D010305 1.6e-13 79.3 63 60.3
BraA03t13418Z Brassica rapa HOM05D008163 ORTHO05D010305 2.1e-13 79.0 76 50.0
Sp3g20090 Schrenkiella parvula HOM05D008163 ORTHO05D010305 2.1e-13 79.0 75 52.0
BcaC01g03452 Brassica carinata HOM05D008163 ORTHO05D010305 4.7e-13 77.8 76 50.0
C03p52430 Brassica napus HOM05D008163 ORTHO05D010305 4.7e-13 77.8 76 50.0
BolC3t17513H Brassica oleracea HOM05D008163 ORTHO05D010305 4.7e-13 77.8 76 50.0
Zm00001eb215210 Zea mays HOM05D008163 ORTHO05D010305 1.1e-12 76.6 61 60.7
BcaB06g26334 Brassica carinata HOM05D008163 ORTHO05D010305 1.4e-12 76.3 75 50.7
BcaC05g28083 Brassica carinata HOM05D008163 ORTHO05D010305 1.8e-12 75.9 74 51.4
A05p26470 Brassica napus HOM05D008163 ORTHO05D010305 1.8e-12 75.9 74 51.4
C05p41060 Brassica napus HOM05D008163 ORTHO05D010305 1.8e-12 75.9 74 51.4
BolC5t32848H Brassica oleracea HOM05D008163 ORTHO05D010305 1.8e-12 75.9 74 51.4
BraA05t21520Z Brassica rapa HOM05D008163 ORTHO05D010305 1.8e-12 75.9 74 51.4
Os12g0517200 Oryza sativa ssp. japonica HOM05D008163 ORTHO05D010305 5.3e-12 74.3 65 58.5
SHI03043 Sapria himalayana HOM05D008163 ORTHO05D010305 6.9e-12 73.9 69 49.3
MD07G1062900 Malus domestica HOM05D008163 ORTHO05D010305 3.4e-11 71.6 47 72.3
HanXRQChr07g0196921 Helianthus annuus HOM05D003855 ORTHO05D004722 5.8e-11 70.9 91 42.9
FAN03G0237 Fragaria x ananassa HOM05D008163 ORTHO05D010305 7.6e-11 70.5 71 53.5
RcHm_v2.0_Chr1g0321141 Rosa chinensis HOM05D008163 ORTHO05D010305 9.9e-11 70.1 69 56.5
FAN06G4466 Fragaria x ananassa HOM05D008163 ORTHO05D010305 2.2e-10 68.9 69 53.6
Manes.09G036100 Manihot esculenta HOM05D008163 ORTHO05D010305 3.8e-10 68.2 52 69.2
FvH4_7g02510 Fragaria vesca HOM05D008163 ORTHO05D010305 8.4e-10 67.0 69 52.2
Actinidia29350 Actinidia chinensis HOM05D008163 ORTHO05D010305 1.1e-09 66.6 46 67.4
SEGI_07019 Sequoiadendron giganteum HOM05D008163 ORTHO05D010305 1.1e-09 66.6 71 50.7
RcHm_v2.0_Chr2g0149911 Rosa chinensis HOM05D008163 ORTHO05D010305 1.4e-09 66.2 66 56.1
Ah.14g087810 Amaranthus hybridus HOM05D000967 ORTHO05D000796 7.1e-09 63.9 60 48.3
ECA238G1787 Erigeron canadensis HOM05D003855 ORTHO05D004722 7.8e-08 60.5 77 41.6
Rhsim06G0223600 Rhododendron simsii HOM05D000504 ORTHO05D000403 1.0e-07 60.1 40 70.0
Pp3c3_3090 Physcomitrium patens HOM05D008163 ORTHO05D010305 3.9e-07 58.2 66 42.4
CSS0033547 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 5.1e-07 57.8 45 64.4
CSS0047821 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 5.1e-07 57.8 45 64.4
DCAR_027582 Daucus carota HOM05D008163 ORTHO05D010305 3.3e-06 55.1 83 39.8
PSO017G7110 Papaver somniferum HOM05D008163 ORTHO05D010305 3.3e-06 55.1 38 65.8
PSO170G4613 Papaver somniferum HOM05D008163 ORTHO05D010305 3.3e-06 55.1 38 65.8
Prupe.7G029400 Prunus persica HOM05D008163 ORTHO05D010305 7.3e-06 53.9 33 75.8


User provided reference genes

Program Settings