Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G174600 Glycine max HOM05D002093 ORTHO05D003877 5.1e-114 414.5 216 100.0
Glyma.05G095666 Glycine max HOM05D002093 ORTHO05D003877 1.5e-89 333.2 225 83.6
Phvul.003G243900 Phaseolus vulgaris HOM05D002093 ORTHO05D003877 5.6e-76 288.1 227 76.2
VMungo0251G2600 Vigna mungo HOM05D002093 ORTHO05D003877 8.9e-74 280.8 224 75.0
Lj4g0019433 Lotus japonicus HOM05D002093 ORTHO05D003877 1.9e-39 166.8 404 35.9
Ca_22163_v3 Cicer arietinum L. HOM05D002093 ORTHO05D003877 1.3e-37 160.6 398 35.4
SalBow1G1545 Salvia bowleyana HOM05D002093 ORTHO05D003877 3.0e-37 159.5 344 38.4
Cfa004024 Carpinus fangiana HOM05D002093 ORTHO05D003877 3.9e-37 159.1 402 35.6
Haze_15397 Corylus avellana HOM05D002093 ORTHO05D003877 3.9e-37 159.1 402 35.6
Manes.13G124200 Manihot esculenta HOM05D002093 ORTHO05D003877 5.1e-37 158.7 402 35.3
THA.LOC104827141 Tarenaya hassleriana HOM05D002093 ORTHO05D003877 8.7e-37 157.9 403 35.5
QL06p041362 Quercus lobata HOM05D002093 ORTHO05D003877 1.5e-36 157.1 400 35.8
Phvul.002G018800 Phaseolus vulgaris HOM05D002093 ORTHO05D003877 3.3e-36 156.0 403 35.0
Manes.12G106900 Manihot esculenta HOM05D002093 ORTHO05D003877 4.3e-36 155.6 402 35.6
Thecc.01G056400 Theobroma cacao HOM05D002093 ORTHO05D003877 4.3e-36 155.6 401 34.7
COL.COLO4_11417 Corchorus olitorius HOM05D002093 ORTHO05D003877 5.6e-36 155.2 401 34.9
Thhalv10010424m.g Eutrema salsugineum HOM05D002093 ORTHO05D003877 5.6e-36 155.2 407 34.9
TAR628G1162 Trochodendron aralioides HOM05D002093 ORTHO05D003877 7.3e-36 154.8 402 35.1
Ciclev10025785m.g Citrus clementina HOM05D002093 ORTHO05D003877 1.3e-35 154.1 399 35.1
Nitab4.5_0002440g0020 Nicotiana tabacum HOM05D002093 ORTHO05D003877 1.3e-35 154.1 400 34.8
AT3G50340 Arabidopsis thaliana HOM05D002093 ORTHO05D003877 1.6e-35 153.7 407 34.9
CiPaw.01G018000 Carya illinoinensis HOM05D002093 ORTHO05D003877 1.6e-35 153.7 402 35.6
AL5G30460 Arabidopsis lyrata HOM05D002093 ORTHO05D003877 2.1e-35 153.3 407 35.1
CARHR159800 Cardamine hirsuta HOM05D002093 ORTHO05D003877 2.1e-35 153.3 408 34.8
Sabra07G0038900 Salix brachista HOM05D002093 ORTHO05D003877 2.1e-35 153.3 400 35.0
CANSAT01G0818 Cannabis sativa HOM05D002093 ORTHO05D003877 2.8e-35 152.9 406 34.2
Nitab4.5_0002016g0100 Nicotiana tabacum HOM05D002093 ORTHO05D003877 2.8e-35 152.9 400 34.8
Potri.007G044200 Populus trichocarpa HOM05D002093 ORTHO05D003877 3.6e-35 152.5 400 35.8
Dinv39847 Davidia involucrata HOM05D002093 ORTHO05D003877 4.8e-35 152.1 398 35.4
Psat0s1281g0040 Pisum sativum HOM05D002093 ORTHO05D003877 4.8e-35 152.1 401 35.9
VMungo1215G2131 Vigna mungo HOM05D002093 ORTHO05D003877 6.2e-35 151.8 403 35.0
Actinidia16482 Actinidia chinensis HOM05D002093 ORTHO05D003877 8.1e-35 151.4 399 34.6
Lj2g0008573 Lotus japonicus HOM05D002093 ORTHO05D003877 8.1e-35 151.4 397 34.5
TWI73G0884 Tripterygium wilfordii HOM05D002093 ORTHO05D003877 8.1e-35 151.4 399 35.1
Carub.0005s1665 Capsella rubella HOM05D002093 ORTHO05D003877 1.1e-34 151.0 405 34.8
arahy.Tifrunner.gnm1.ann1.31X1J3 Arachis hypogaea HOM05D002093 ORTHO05D003877 1.4e-34 150.6 400 34.5
arahy.Tifrunner.gnm1.ann1.KYX91V Arachis hypogaea HOM05D002093 ORTHO05D003877 1.8e-34 150.2 400 34.5
Duzib147G0327 Durio zibethinus HOM05D002093 ORTHO05D003877 2.4e-34 149.8 401 33.9
BraA09t39804Z Brassica rapa HOM05D002093 ORTHO05D003877 6.9e-34 148.3 405 34.3
Gohir.A11G192500 Gossypium hirsutum HOM05D002093 ORTHO05D003877 6.9e-34 148.3 401 33.9
PGSC0003DMG400004041 Solanum tuberosum HOM05D002093 ORTHO05D003877 6.9e-34 148.3 399 34.3
TWI09G1584 Tripterygium wilfordii HOM05D002093 ORTHO05D003877 1.5e-33 147.1 399 34.3
BcaC07g39493 Brassica carinata HOM05D002093 ORTHO05D003877 2.0e-33 146.7 407 33.9
C08p25380 Brassica napus HOM05D002093 ORTHO05D003877 2.0e-33 146.7 407 33.9
BolC8t50159H Brassica oleracea HOM05D002093 ORTHO05D003877 2.0e-33 146.7 407 33.9
Duzib187G1344 Durio zibethinus HOM05D002093 ORTHO05D003877 2.6e-33 146.4 401 33.9
Lalb_Chr16g0378551 Lupinus albus HOM05D002093 ORTHO05D003877 2.6e-33 146.4 394 33.2
Glyma.01G186100 Glycine max HOM05D002093 ORTHO05D003877 3.4e-33 146.0 401 34.4
Sabra05G0112200 Salix brachista HOM05D002093 ORTHO05D003877 3.4e-33 146.0 400 34.2
Solyc02g090870.1 Solanum lycopersicum HOM05D002093 ORTHO05D003877 3.4e-33 146.0 399 34.1
Sopen02g035520 Solanum pennellii HOM05D002093 ORTHO05D003877 3.4e-33 146.0 399 34.1
Glyma.11G055900 Glycine max HOM05D002093 ORTHO05D003877 4.5e-33 145.6 404 34.4
Gohir.D11G199200 Gossypium hirsutum HOM05D002093 ORTHO05D003877 4.5e-33 145.6 401 34.2
Sed0011926 Sechium edule HOM05D002093 ORTHO05D003877 5.8e-33 145.2 380 34.2
Gohir.D12G069400 Gossypium hirsutum HOM05D002093 ORTHO05D003877 7.6e-33 144.8 401 32.9
Migut.K00766 Erythranthe guttata HOM05D002093 ORTHO05D003877 9.9e-33 144.4 387 32.8
Hma1.2p1_1705F.1_g298390 Hydrangea macrophylla HOM05D002093 ORTHO05D003877 1.3e-32 144.1 397 35.0
Gohir.A12G070900 Gossypium hirsutum HOM05D002093 ORTHO05D003877 1.7e-32 143.7 401 32.7
Gorai.008G076000 Gossypium raimondii HOM05D002093 ORTHO05D003877 1.7e-32 143.7 401 33.4
Sp5g11850 Schrenkiella parvula HOM05D002093 ORTHO05D003877 1.7e-32 143.7 407 33.9
Cc07_g06000 Coffea canephora HOM05D002093 ORTHO05D003877 2.2e-32 143.3 407 33.4
Gorai.007G213400 Gossypium raimondii HOM05D002093 ORTHO05D003877 2.2e-32 143.3 401 33.9
Rhsim10G0117500 Rhododendron simsii HOM05D002093 ORTHO05D003877 2.2e-32 143.3 388 32.5
A09p43350 Brassica napus HOM05D002093 ORTHO05D003877 2.9e-32 142.9 405 33.8
CiPaw.02G008200 Carya illinoinensis HOM05D002093 ORTHO05D003877 2.9e-32 142.9 402 33.8
Atru.chr3.326 Acer truncatum HOM05D002093 ORTHO05D003877 4.9e-32 142.1 156 55.1
Migut.H00432 Erythranthe guttata HOM05D002093 ORTHO05D003877 4.9e-32 142.1 400 32.5
Peaxi162Scf00450g00035 Petunia axillaris HOM05D002093 ORTHO05D003877 4.9e-32 142.1 411 32.8
Psat2g167200 Pisum sativum HOM05D002093 ORTHO05D003877 4.9e-32 142.1 398 34.2
TPR.G30703 Trifolium pratense HOM05D002093 ORTHO05D003877 6.4e-32 141.7 404 33.7
BcaB05g23211 Brassica carinata HOM05D002093 ORTHO05D003877 8.4e-32 141.4 407 33.9
Lalb_Chr09g0323191 Lupinus albus HOM05D002093 ORTHO05D003877 8.4e-32 141.4 389 32.9
AT5G67020 Arabidopsis thaliana HOM05D002093 ORTHO05D003877 1.1e-31 141.0 398 34.2
CSS0045673 Camellia sinensis var. sinensis HOM05D002093 ORTHO05D003877 1.1e-31 141.0 403 33.3
Cpa.g.sc55.147 Carica papaya HOM05D002093 ORTHO05D003877 1.1e-31 141.0 400 33.0
SalBow5G0755 Salvia bowleyana HOM05D002093 ORTHO05D003877 1.1e-31 141.0 349 34.4
SalBow5G4513 Salvia bowleyana HOM05D002093 ORTHO05D003877 1.1e-31 141.0 349 34.4
CAN.G660.8 Capsicum annuum HOM05D002093 ORTHO05D003877 1.4e-31 140.6 398 33.9
Potri.005G138300 Populus trichocarpa HOM05D002093 ORTHO05D003877 1.4e-31 140.6 400 33.5
MELO3C020873.2 Cucumis melo HOM05D002093 ORTHO05D003877 1.9e-31 140.2 399 32.1
CsaV3_2G016640 Cucumis sativus L. HOM05D002093 ORTHO05D003877 2.4e-31 139.8 397 32.2
Sp2g29650 Schrenkiella parvula HOM05D002093 ORTHO05D003877 3.2e-31 139.4 399 33.8
Rhsim08G0100300 Rhododendron simsii HOM05D002093 ORTHO05D003877 4.2e-31 139.0 404 33.4
Sed0009898 Sechium edule HOM05D002093 ORTHO05D003877 5.4e-31 138.7 368 33.7
BcaC09g50022 Brassica carinata HOM05D002093 ORTHO05D003877 7.1e-31 138.3 402 33.6
C01p29900 Brassica napus HOM05D002093 ORTHO05D003877 7.1e-31 138.3 402 33.6
BolC1t02932H Brassica oleracea HOM05D002093 ORTHO05D003877 7.1e-31 138.3 402 33.6
AUR62001927 Chenopodium quinoa HOM05D002093 ORTHO05D003877 1.2e-30 137.5 399 32.3
Medtr5g017410 Medicago truncatula HOM05D002093 ORTHO05D003877 1.2e-30 137.5 394 33.0
BcaB01g00624 Brassica carinata HOM05D002093 ORTHO05D003877 1.6e-30 137.1 406 33.7
Ca_24769_v3 Cicer arietinum L. HOM05D002093 ORTHO05D003877 1.6e-30 137.1 387 34.1
arahy.Tifrunner.gnm1.ann1.6LZ9WW Arachis hypogaea HOM05D002093 ORTHO05D003877 2.1e-30 136.7 382 33.8
PGR004G1935 Punica granatum HOM05D002093 ORTHO05D003877 2.1e-30 136.7 403 32.8
TPR.G19073 Trifolium pratense HOM05D002093 ORTHO05D003877 2.1e-30 136.7 366 35.2
ClCG02G012510 Citrullus lanatus HOM05D002093 ORTHO05D003877 2.7e-30 136.3 399 31.1
Lj7A69T48 Lonicera japonica HOM05D002093 ORTHO05D003877 3.5e-30 136.0 400 32.5
MSTRG.23745 Avicennia marina HOM05D002093 ORTHO05D003877 4.6e-30 135.6 403 33.3
A01p24190 Brassica napus HOM05D002093 ORTHO05D003877 6.0e-30 135.2 406 33.0
BraA01t02331Z Brassica rapa HOM05D002093 ORTHO05D003877 6.0e-30 135.2 406 33.0
Actinidia36495 Actinidia chinensis HOM05D002093 ORTHO05D003877 7.9e-30 134.8 381 34.1
MSTRG.2884 Avicennia marina HOM05D002093 ORTHO05D003877 7.9e-30 134.8 400 32.0
arahy.Tifrunner.gnm1.ann1.R7X80S Arachis hypogaea HOM05D002093 ORTHO05D003877 1.0e-29 134.4 382 33.5
MBI03_g13471_MAGBIO Magnolia biondii HOM05D002093 ORTHO05D003877 1.0e-29 134.4 391 31.7
Oeu018957.1 Olea europaea HOM05D002093 ORTHO05D003877 2.3e-29 133.3 397 33.5
Aa31LG4G18570 Aethionema arabicum HOM05D002093 ORTHO05D003877 3.0e-29 132.9 384 32.6
ClCG01G016830 Citrullus lanatus HOM05D002093 ORTHO05D003877 3.0e-29 132.9 396 31.6
Oeu031527.1 Olea europaea HOM05D002093 ORTHO05D003877 3.0e-29 132.9 353 34.8
AUR62003883 Chenopodium quinoa HOM05D002093 ORTHO05D003877 3.9e-29 132.5 189 45.5
GSVIVG01022129001 Vitis vinifera HOM05D002093 ORTHO05D003877 8.7e-29 131.3 110 63.6
Ah.02g124300 Amaranthus hybridus HOM05D002093 ORTHO05D003877 1.1e-28 131.0 404 30.9
CSS0014053 Camellia sinensis var. sinensis HOM05D002093 ORTHO05D003877 1.5e-28 130.6 111 63.1
MSTRG.15388 Avicennia marina HOM05D002093 ORTHO05D003877 1.9e-28 130.2 400 32.0
TAR625G0453 Trochodendron aralioides HOM05D002093 ORTHO05D003877 1.9e-28 130.2 397 32.5
HanXRQChr09g0263831 Helianthus annuus HOM05D002093 ORTHO05D003877 2.5e-28 129.8 402 30.1
PGR102G1838 Punica granatum HOM05D002093 ORTHO05D003877 3.3e-28 129.4 402 31.8
MELO3C000152.2 Cucumis melo HOM05D002093 ORTHO05D003877 5.6e-28 128.6 396 31.6
AL8G44340 Arabidopsis lyrata HOM05D002093 ORTHO05D003877 9.6e-28 127.9 398 32.7
Lsat_1_v5_gn_4_166281 Lactuca sativa HOM05D002093 ORTHO05D003877 1.6e-27 127.1 403 31.3
CsaV3_6G043270 Cucumis sativus L. HOM05D002093 ORTHO05D003877 2.8e-27 126.3 396 31.1
TAR381G1348 Trochodendron aralioides HOM05D002093 ORTHO05D003877 3.6e-27 125.9 406 32.3
Sc03g0001590 Simmondsia chinensis HOM05D002093 ORTHO05D003877 1.4e-26 124.0 175 44.6
Aqoxy6G01309 Aquilegia oxysepala HOM05D002093 ORTHO05D003877 1.8e-26 123.6 418 29.4
Actinidia12051 Actinidia chinensis HOM05D002093 ORTHO05D003877 3.1e-26 122.9 311 35.4
TWI53G0455 Tripterygium wilfordii HOM05D002093 ORTHO05D003877 3.1e-26 122.9 396 31.8
Eucgr.H02035 Eucalyptus grandis HOM05D002093 ORTHO05D003877 4.0e-26 122.5 387 30.5
DCAR_025734 Daucus carota HOM05D002093 ORTHO05D003877 5.3e-26 122.1 395 32.4
MSTRG.3425 Avicennia marina HOM05D002093 ORTHO05D003877 9.0e-26 121.3 125 54.4
vmacro05338 Vaccinium macrocarpon HOM05D002093 ORTHO05D003877 1.2e-25 120.9 114 57.0
ECA232G3993 Erigeron canadensis HOM05D002093 ORTHO05D003877 1.5e-25 120.6 399 30.6
Sed0000549 Sechium edule HOM05D002093 ORTHO05D003877 1.5e-25 120.6 208 44.2
EL10Ac6g15743 Beta vulgaris HOM05D002093 ORTHO05D003877 3.4e-25 119.4 391 31.5
Gohir.D03G023700 Gossypium hirsutum HOM05D002093 ORTHO05D003877 3.4e-25 119.4 399 31.1
Gorai.003G025200 Gossypium raimondii HOM05D002093 ORTHO05D003877 3.4e-25 119.4 399 31.1
Oeu031528.1 Olea europaea HOM05D002093 ORTHO05D003877 3.4e-25 119.4 399 31.1
Oeu031953.1 Olea europaea HOM05D002093 ORTHO05D003877 4.5e-25 119.0 110 56.4
CARHR280640 Cardamine hirsuta HOM05D002093 ORTHO05D003877 7.6e-25 118.2 405 32.3
Prupe.7G133200 Prunus persica HOM05D002093 ORTHO05D003877 7.6e-25 118.2 408 30.9
THA.LOC104821255 Tarenaya hassleriana HOM05D002093 ORTHO05D003877 9.9e-25 117.9 400 32.8
RcHm_v2.0_Chr2g0105691 Rosa chinensis HOM05D002093 ORTHO05D003877 1.7e-24 117.1 404 30.7
FvH4_1g16070 Fragaria vesca HOM05D002093 ORTHO05D003877 2.2e-24 116.7 406 31.0
FAN19G2882 Fragaria x ananassa HOM05D002093 ORTHO05D003877 2.2e-24 116.7 406 31.0
FAN26G2318 Fragaria x ananassa HOM05D002093 ORTHO05D003877 2.2e-24 116.7 406 31.0
MD15G1284400 Malus domestica HOM05D002093 ORTHO05D003877 2.2e-24 116.7 407 30.2
FAN23G2320 Fragaria x ananassa HOM05D002093 ORTHO05D003877 8.4e-24 114.8 406 30.8
Carub.0008s2748 Capsella rubella HOM05D002093 ORTHO05D003877 1.1e-23 114.4 405 30.6
HanXRQChr15g0490521 Helianthus annuus HOM05D002093 ORTHO05D003877 1.1e-23 114.4 411 29.4
A07p16910 Brassica napus HOM05D002093 ORTHO05D003877 1.4e-23 114.0 391 30.9
FAN28G1260 Fragaria x ananassa HOM05D002093 ORTHO05D003877 1.4e-23 114.0 406 30.5
Gohir.A02G157200 Gossypium hirsutum HOM05D002093 ORTHO05D003877 1.4e-23 114.0 399 30.6
MD02G1172200 Malus domestica HOM05D002093 ORTHO05D003877 2.4e-23 113.2 407 29.7
PSO675G7228 Papaver somniferum HOM05D002093 ORTHO05D003877 3.2e-23 112.8 111 56.8
BraA07t29417Z Brassica rapa HOM05D002093 ORTHO05D003877 5.5e-23 112.1 391 30.7
C07p24730 Brassica napus HOM05D002093 ORTHO05D003877 2.7e-22 109.8 390 30.8
BolC7t42993H Brassica oleracea HOM05D002093 ORTHO05D003877 2.7e-22 109.8 390 30.8
PSO541G0340 Papaver somniferum HOM05D002093 ORTHO05D003877 2.7e-22 109.8 111 55.9
Lj4C149T6 Lonicera japonica HOM05D002093 ORTHO05D003877 1.3e-21 107.5 108 52.8
PSO170G6176 Papaver somniferum HOM05D002093 ORTHO05D003877 8.7e-21 104.8 118 49.2
PSO210G1107 Papaver somniferum HOM05D002093 ORTHO05D003877 1.1e-20 104.4 122 47.5
BcaC06g34778 Brassica carinata HOM05D002093 ORTHO05D003877 1.5e-20 104.0 158 41.8
Aa31LG1G15550 Aethionema arabicum HOM05D002093 ORTHO05D003877 2.5e-20 103.2 381 29.4
Os08g0472400 Oryza sativa ssp. japonica HOM05D002093 ORTHO05D003877 9.6e-20 101.3 115 46.1
BcaC06g34779 Brassica carinata HOM05D002093 ORTHO05D003877 2.1e-19 100.1 368 30.4
CDE04G2094 Ceratophyllum demersum HOM05D002093 ORTHO05D003877 2.1e-19 100.1 127 45.7
Zm00001eb176690 Zea mays HOM05D002093 ORTHO05D003877 4.8e-19 99.0 117 44.4
CDE03G0206 Ceratophyllum demersum HOM05D002093 ORTHO05D003877 8.1e-19 98.2 106 48.1
Os09g0456700 Oryza sativa ssp. japonica HOM05D002093 ORTHO05D003877 8.1e-19 98.2 111 43.2
Zm00001eb038030 Zea mays HOM05D002093 ORTHO05D003877 8.1e-19 98.2 119 43.7
HPP92_016719 Vanilla planifolia HOM05D002093 ORTHO05D003877 2.4e-18 96.7 398 28.9
ATR0009G029 Amborella trichopoda HOM05D002093 ORTHO05D003877 4.0e-18 95.9 115 45.2
unitig_899.g14664 Utricularia gibba HOM05D002093 ORTHO05D003877 1.5e-17 94.0 383 29.0
SGA_v2.0_scaffold15G07304 Striga asiatica HOM05D002093 ORTHO05D003877 4.5e-17 92.4 233 36.1
Oeu031526.1 Olea europaea HOM05D002093 ORTHO05D003877 3.8e-16 89.4 252 36.5
unitig_899.g14941 Utricularia gibba HOM05D002093 ORTHO05D003877 4.9e-16 89.0 182 35.2
Eucgr.I00924 Eucalyptus grandis HOM05D002093 ORTHO05D003877 1.6e-14 84.0 122 50.0
unitig_736.g22665 Utricularia gibba HOM05D002093 ORTHO05D003877 3.9e-13 79.3 112 40.2
CDE08G0082 Ceratophyllum demersum HOM05D002093 ORTHO05D003877 1.1e-12 77.8 156 35.3
C07p24720 Brassica napus HOM05D002093 ORTHO05D003877 3.7e-11 72.8 119 47.1
Oeu031954.1 Olea europaea HOM05D002093 ORTHO05D003877 4.8e-11 72.4 142 40.1
Zm00001eb314880 Zea mays HOM05D002093 ORTHO05D003877 2.4e-10 70.1 117 31.6
Lj4C149T5 Lonicera japonica HOM05D002093 ORTHO05D003877 1.5e-09 67.4 74 56.8
Pp3c10_11830 Physcomitrium patens HOM05D002093 ORTHO05D003877 1.4e-07 60.8 78 42.3
SEGI_36257 Sequoiadendron giganteum HOM05D002093 ORTHO05D003877 1.9e-07 60.5 110 30.0
ClCG02G005190 Citrullus lanatus HOM05D002093 ORTHO05D003877 4.2e-07 59.3 73 46.6
Os03g0396000 Oryza sativa ssp. japonica HOM05D002093 ORTHO05D003877 1.2e-06 57.8 105 34.3
Mapoly1620s0002 Marchantia polymorpha HOM05D002093 ORTHO05D003877 1.6e-06 57.4 194 28.9


User provided reference genes

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