Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G161000 Glycine max HOM05D006223 ORTHO05D012503 1.1e-30 136.0 69 100.0
Glyma.05G105400 Glycine max HOM05D006223 ORTHO05D012503 4.7e-29 130.6 69 94.2
Phvul.003G235200 Phaseolus vulgaris HOM05D006223 ORTHO05D012503 6.0e-24 113.6 66 83.3
TPR.G24236 Trifolium pratense HOM05D006223 ORTHO05D012503 5.4e-17 90.5 69 65.2
Lj4g0020529 Lotus japonicus HOM05D006223 ORTHO05D012503 2.1e-16 88.6 68 63.2
Cfa004129 Carpinus fangiana HOM05D006223 ORTHO05D012503 2.3e-15 85.1 63 68.3
Lalb_Chr09g0334081 Lupinus albus HOM05D006223 ORTHO05D012503 2.1e-13 78.6 69 55.1
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 8.1e-13 76.6 61 65.6
Gorai.007G223300 Gossypium raimondii HOM05D006223 ORTHO05D012503 9.0e-12 73.2 52 69.2
Gohir.A11G215100 Gossypium hirsutum HOM05D006223 ORTHO05D012503 2.0e-11 72.0 52 67.3
Medtr4g097020 Medicago truncatula HOM05D006223 ORTHO05D012503 2.0e-11 72.0 70 61.4
Cpa.g.sc6.20 Carica papaya HOM05D006223 ORTHO05D012503 2.6e-11 71.6 66 57.6
FAN28G0296 Fragaria x ananassa HOM05D006223 ORTHO05D012503 4.5e-11 70.9 53 62.3
RcHm_v2.0_Chr2g0107991 Rosa chinensis HOM05D006223 ORTHO05D012503 1.3e-10 69.3 69 52.2
Gorai.008G083700 Gossypium raimondii HOM05D006223 ORTHO05D012503 4.9e-10 67.4 63 57.1
Gohir.A12G077200 Gossypium hirsutum HOM05D006223 ORTHO05D012503 1.1e-09 66.2 60 60.0
Dinv26928 Davidia involucrata HOM05D006223 ORTHO05D012503 1.6e-08 62.4 61 54.1
Potri.012G080700 Populus trichocarpa HOM05D006223 ORTHO05D012503 2.3e-07 58.5 60 53.3
Gohir.D12G075400 Gossypium hirsutum HOM05D006223 ORTHO05D012503 1.9e-06 55.5 44 63.6


User provided reference genes

Program Settings