Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G158701 Glycine max HOM05D000331 ORTHO05D214332 9.7e-92 340.1 170 100.0
Glyma.07G273100 Glycine max HOM05D000331 ORTHO05D003399 9.9e-12 74.3 46 84.8
Glyma.17G001500 Glycine max HOM05D000331 ORTHO05D003399 4.9e-11 72.0 46 80.4
Phvul.003G075500 Phaseolus vulgaris HOM05D000331 ORTHO05D003399 1.1e-10 70.9 46 80.4
Ca_13534_v3 Cicer arietinum L. HOM05D000331 ORTHO05D003399 1.2e-09 67.4 46 76.1
Lj4g0009625 Lotus japonicus HOM05D000331 ORTHO05D003399 2.1e-09 66.6 48 77.1
Psat0s1492g0040 Pisum sativum HOM05D000331 ORTHO05D003399 3.5e-09 65.9 46 73.9
VMungo1215G0321 Vigna mungo HOM05D000331 ORTHO05D003399 6.0e-09 65.1 47 76.6
TPR.G5988 Trifolium pratense HOM05D000331 ORTHO05D003399 1.0e-08 64.3 48 70.8
Sabra03G0000600 Salix brachista HOM05D000331 ORTHO05D003399 6.7e-08 61.6 46 71.7
CAN.G876.1 Capsicum annuum HOM05D000331 ORTHO05D003399 8.7e-08 61.2 47 74.5
Oeu017735.1 Olea europaea HOM05D000331 ORTHO05D003399 8.7e-08 61.2 47 72.3
Hma1.2p1_0052F.1_g029935 Hydrangea macrophylla HOM05D000331 ORTHO05D003399 1.5e-07 60.5 47 72.3
Potri.003G001400 Populus trichocarpa HOM05D000331 ORTHO05D003399 1.5e-07 60.5 46 69.6
TAR381G0865 Trochodendron aralioides HOM05D000331 ORTHO05D003399 1.5e-07 60.5 46 67.4
CSS0005378 Camellia sinensis var. sinensis HOM05D000331 ORTHO05D003399 1.9e-07 60.1 47 70.2
Actinidia26189 Actinidia chinensis HOM05D000331 ORTHO05D003399 2.5e-07 59.7 64 53.1
CSS0026537 Camellia sinensis var. sinensis HOM05D000331 ORTHO05D003399 2.5e-07 59.7 47 70.2
QL02p103137 Quercus lobata HOM05D000331 ORTHO05D003399 2.5e-07 59.7 46 67.4
Medtr4g134680 Medicago truncatula HOM05D000331 ORTHO05D003399 5.6e-07 58.5 48 64.6
Actinidia00153 Actinidia chinensis HOM05D000331 ORTHO05D003399 7.4e-07 58.2 51 64.7
Cc10_g09200 Coffea canephora HOM05D000331 ORTHO05D003399 7.4e-07 58.2 47 68.1
Nitab4.5_0001359g0030 Nicotiana tabacum HOM05D000331 ORTHO05D003399 7.4e-07 58.2 47 70.2
Potri.004G228400 Populus trichocarpa HOM05D000331 ORTHO05D003399 7.4e-07 58.2 47 70.2
Dinv29625 Davidia involucrata HOM05D000331 ORTHO05D003399 9.6e-07 57.8 47 68.1
Solyc11g039650.2 Solanum lycopersicum HOM05D000331 ORTHO05D003399 9.6e-07 57.8 47 72.3
Sopen11g017950 Solanum pennellii HOM05D000331 ORTHO05D003399 9.6e-07 57.8 47 72.3
Dinv29672 Davidia involucrata HOM05D000331 ORTHO05D003399 1.3e-06 57.4 47 68.1
Nitab4.5_0001278g0060 Nicotiana tabacum HOM05D000331 ORTHO05D003399 1.6e-06 57.0 47 70.2
Actinidia01628 Actinidia chinensis HOM05D000331 ORTHO05D003399 2.1e-06 56.6 47 66.0
Sabra01G0173300 Salix brachista HOM05D000331 ORTHO05D003399 2.8e-06 56.2 47 68.1
TAR628G0110 Trochodendron aralioides HOM05D000331 ORTHO05D003399 2.8e-06 56.2 47 68.1
Rhsim11G0118400 Rhododendron simsii HOM05D000331 ORTHO05D003399 3.7e-06 55.8 46 65.2
CiPaw.04G009000 Carya illinoinensis HOM05D000331 ORTHO05D003399 4.8e-06 55.5 47 66.0
Haze_13975 Corylus avellana HOM05D000331 ORTHO05D003399 4.8e-06 55.5 47 66.0
Dinv22132 Davidia involucrata HOM05D000331 ORTHO05D003399 4.8e-06 55.5 47 66.0
TAR376G0360 Trochodendron aralioides HOM05D000331 ORTHO05D003399 4.8e-06 55.5 47 66.0
Sabra19G0082200 Salix brachista HOM05D000331 ORTHO05D003399 6.2e-06 55.1 47 63.8
vmacro01684 Vaccinium macrocarpon HOM05D000331 ORTHO05D003399 6.2e-06 55.1 46 65.2
CiPaw.03G013200 Carya illinoinensis HOM05D000331 ORTHO05D003399 8.1e-06 54.7 47 66.0
Haze_09996 Corylus avellana HOM05D000331 ORTHO05D003399 8.1e-06 54.7 46 63.0
TWI14G0915 Tripterygium wilfordii HOM05D000331 ORTHO05D003399 8.1e-06 54.7 47 63.8


User provided reference genes

Program Settings