Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G149700 Glycine max HOM05D003663 ORTHO05D005327 5.8e-121 437.6 221 100.0
Phvul.003G226500 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 2.7e-78 295.8 244 68.4
Lalb_Chr05g0220821 Lupinus albus HOM05D003663 ORTHO05D005327 5.1e-77 291.6 253 67.6
Lj4g0026545 Lotus japonicus HOM05D003663 ORTHO05D005327 2.0e-76 289.7 255 62.7
VMungo0251G1526 Vigna mungo HOM05D003663 ORTHO05D005327 2.8e-75 285.8 247 67.2
Psat4g076520 Pisum sativum HOM05D003663 ORTHO05D005327 2.5e-71 272.7 240 62.1
Medtr4g099150 Medicago truncatula HOM05D003663 ORTHO05D005327 2.6e-68 262.7 242 57.0
TPR.G17125 Trifolium pratense HOM05D003663 ORTHO05D005327 3.1e-66 255.8 240 57.1
Haze_00422 Corylus avellana HOM05D003663 ORTHO05D005327 6.1e-54 214.9 228 53.5
QL09p023778 Quercus lobata HOM05D003663 ORTHO05D005327 1.3e-51 207.2 246 48.4
Hma1.2p1_1680F.1_g297170 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 1.2e-49 200.7 237 47.7
Manes.09G126900 Manihot esculenta HOM05D003663 ORTHO05D005327 3.5e-49 199.1 236 50.0
TAR374G1477 Trochodendron aralioides HOM05D003663 ORTHO05D005327 4.5e-49 198.7 237 47.7
Sabra19G0059300 Salix brachista HOM05D003663 ORTHO05D005327 1.3e-48 197.2 231 50.2
Cfa016035 Carpinus fangiana HOM05D003663 ORTHO05D005327 1.7e-48 196.8 242 50.4
Rhsim09G0213000 Rhododendron simsii HOM05D003663 ORTHO05D005327 1.7e-48 196.8 252 47.6
Duzib177G0557 Durio zibethinus HOM05D003663 ORTHO05D005327 6.5e-48 194.9 205 51.7
CiPaw.06G032900 Carya illinoinensis HOM05D003663 ORTHO05D005327 1.5e-47 193.7 244 45.5
Duzib106G1874 Durio zibethinus HOM05D003663 ORTHO05D005327 1.9e-47 193.4 232 47.0
TWI34G0428 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 4.2e-47 192.2 196 53.6
Oeu027885.1 Olea europaea HOM05D003663 ORTHO05D005327 1.2e-46 190.7 208 50.0
Nn3g19378 Nelumbo nucifera HOM05D003663 ORTHO05D005327 2.1e-46 189.9 240 45.0
Sc13g0010870 Simmondsia chinensis HOM05D003663 ORTHO05D005327 4.7e-46 188.7 174 57.5
CAN.G65.131 Capsicum annuum HOM05D003663 ORTHO05D005327 2.3e-45 186.4 214 46.7
AUR62002065 Chenopodium quinoa HOM05D003663 ORTHO05D005327 4.0e-45 185.7 201 50.7
Potri.019G049600 Populus trichocarpa HOM05D003663 ORTHO05D005327 4.0e-45 185.7 233 47.6
CSS0037566 Camellia sinensis var. sinensis HOM05D003663 ORTHO05D005327 5.2e-45 185.3 182 55.5
Ah.13g072750 Amaranthus hybridus HOM05D003663 ORTHO05D005327 1.5e-44 183.7 215 48.4
Aqoxy3G02161 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.5e-44 183.7 179 52.5
CANSAT21G0248 Cannabis sativa HOM05D003663 ORTHO05D005327 2.6e-44 183.0 188 52.7
Ciclev10021912m.g Citrus clementina HOM05D003663 ORTHO05D005327 4.4e-44 182.2 158 59.5
Peaxi162Scf00815g00311 Petunia axillaris HOM05D003663 ORTHO05D005327 5.7e-44 181.8 181 49.2
vmacro22176 Vaccinium macrocarpon HOM05D003663 ORTHO05D005327 9.8e-44 181.0 189 52.4
Duzib128G0448 Durio zibethinus HOM05D003663 ORTHO05D005327 1.7e-43 180.3 204 48.5
COL.COLO4_06064 Corchorus olitorius HOM05D003663 ORTHO05D005327 4.9e-43 178.7 243 44.9
Nitab4.5_0001762g0070 Nicotiana tabacum HOM05D003663 ORTHO05D005327 6.3e-43 178.3 198 46.0
PGSC0003DMG400027034 Solanum tuberosum HOM05D003663 ORTHO05D005327 1.4e-42 177.2 215 43.7
EL10Ac3g05074 Beta vulgaris HOM05D003663 ORTHO05D005327 1.8e-42 176.8 169 53.8
DCAR_010543 Daucus carota HOM05D003663 ORTHO05D005327 4.1e-42 175.6 228 44.7
Oeu060390.1 Olea europaea HOM05D002083 ORTHO05D000332 7.0e-42 174.9 164 53.7
PSO063G6858 Papaver somniferum HOM05D003663 ORTHO05D005327 1.2e-41 174.1 225 44.4
SalBow2G0094 Salvia bowleyana HOM05D003663 ORTHO05D005327 1.6e-41 173.7 177 52.5
Cpa.g.sc504.5 Carica papaya HOM05D003663 ORTHO05D005327 4.5e-41 172.2 198 50.0
MBI04_g20973_MAGBIO Magnolia biondii HOM05D003663 ORTHO05D005327 7.7e-41 171.4 231 46.3
PSO782G5365 Papaver somniferum HOM05D003663 ORTHO05D005327 1.0e-40 171.0 225 44.0
PGR142G2930 Punica granatum HOM05D003663 ORTHO05D005327 1.7e-40 170.2 184 50.0
Gohir.A11G303600 Gossypium hirsutum HOM05D003663 ORTHO05D005327 2.3e-40 169.9 162 56.8
Nitab4.5_0000021g0580 Nicotiana tabacum HOM05D003663 ORTHO05D005327 2.9e-40 169.5 202 43.6
SGA_v2.0_scaffold50G18444 Striga asiatica HOM05D003663 ORTHO05D005327 2.9e-40 169.5 190 45.8
Gohir.D11G318900 Gossypium hirsutum HOM05D003663 ORTHO05D005327 6.6e-40 168.3 162 56.2
Sopen06g029160 Solanum pennellii HOM05D003663 ORTHO05D005327 1.1e-39 167.5 220 41.8
Gorai.007G348900 Gossypium raimondii HOM05D003663 ORTHO05D005327 1.5e-39 167.2 143 60.1
Eucgr.K00086 Eucalyptus grandis HOM05D003663 ORTHO05D005327 3.3e-39 166.0 178 48.9
Migut.F00942 Erythranthe guttata HOM05D003663 ORTHO05D005327 7.3e-39 164.9 190 49.5
Lj3P887T57 Lonicera japonica HOM05D003663 ORTHO05D005327 1.6e-38 163.7 152 55.9
HanXRQChr14g0462981 Helianthus annuus HOM05D003663 ORTHO05D005327 2.1e-38 163.3 161 50.9
Lsat_1_v5_gn_2_136720 Lactuca sativa HOM05D003663 ORTHO05D005327 2.8e-38 162.9 215 45.6
Rhsim03G0221600 Rhododendron simsii HOM05D003663 ORTHO05D005327 1.0e-37 161.0 160 50.6
THA.LOC104827213 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 5.2e-37 158.7 160 51.2
Cc00_g28240 Coffea canephora HOM05D003663 ORTHO05D005327 1.7e-35 153.7 149 50.3
Lalb_Chr16g0386341 Lupinus albus HOM05D003663 ORTHO05D005327 2.9e-35 152.9 101 78.2
ECA233G1163 Erigeron canadensis HOM05D003663 ORTHO05D005327 4.9e-35 152.1 156 46.2
BolC2t06783H Brassica oleracea HOM05D003663 ORTHO05D005327 1.8e-34 150.2 193 48.2
Prupe.2G326500 Prunus persica HOM05D003663 ORTHO05D005327 2.4e-34 149.8 180 51.7
BcaNung00434 Brassica carinata HOM05D003663 ORTHO05D005327 3.2e-34 149.4 148 54.7
BraA02t05351Z Brassica rapa HOM05D003663 ORTHO05D005327 7.0e-34 148.3 182 47.8
CARHR196240 Cardamine hirsuta HOM05D003663 ORTHO05D005327 3.5e-33 146.0 199 45.2
Sp6g27190 Schrenkiella parvula HOM05D003663 ORTHO05D005327 3.5e-33 146.0 183 45.4
BcaC03g18525 Brassica carinata HOM05D003663 ORTHO05D005327 4.6e-33 145.6 194 47.4
C02p08670 Brassica napus HOM05D003663 ORTHO05D005327 4.6e-33 145.6 194 47.4
AL6G27920 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 5.9e-33 145.2 177 48.0
AT5G16920 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 5.9e-33 145.2 184 46.2
Thhalv10014405m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 1.0e-32 144.4 184 46.2
A02p03870 Brassica napus HOM05D003663 ORTHO05D005327 1.7e-32 143.7 194 45.9
Carub.0006s1513 Capsella rubella HOM05D003663 ORTHO05D005327 1.7e-32 143.7 183 46.4
Actinidia33794 Actinidia chinensis HOM05D003663 ORTHO05D005327 1.1e-31 141.0 115 60.9
Thecc.05G213800 Theobroma cacao HOM05D003663 ORTHO05D005327 3.6e-30 136.0 204 46.6
Os12g0233900 Oryza sativa ssp. japonica HOM05D003663 ORTHO05D005327 5.4e-26 122.1 162 40.1
ATR0829G139 Amborella trichopoda HOM05D003663 ORTHO05D005327 1.2e-25 120.9 183 39.9
Nn1g03229 Nelumbo nucifera HOM05D003663 ORTHO05D005327 1.0e-24 117.9 152 40.1
Aqoxy3G02718 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.9e-23 113.6 180 38.9
Lalb_Chr20g0119391 Lupinus albus HOM05D003663 ORTHO05D005327 3.3e-23 112.8 151 38.4
Hma1.2p1_2614F.1_g325410 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 5.6e-23 112.1 170 39.4
Hma1.2p1_1267F.1_g271530 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 9.5e-23 111.3 177 39.0
arahy.Tifrunner.gnm1.ann1.CR9YGF Arachis hypogaea HOM05D003663 ORTHO05D005327 2.1e-22 110.2 128 41.4
ATR0624G116 Amborella trichopoda HOM05D003663 ORTHO05D005327 2.8e-22 109.8 182 34.6
arahy.Tifrunner.gnm1.ann1.5NF29Y Arachis hypogaea HOM05D003663 ORTHO05D005327 4.7e-22 109.0 153 37.3
LjContig00081g0009748 Lotus japonicus HOM05D003663 ORTHO05D005327 4.7e-22 109.0 179 35.2
TAR627G0054 Trochodendron aralioides HOM05D003663 ORTHO05D005327 4.7e-22 109.0 151 39.1
VMungo0540G0424 Vigna mungo HOM05D003663 ORTHO05D005327 4.7e-22 109.0 150 36.7
VMungo0647G1338 Vigna mungo HOM05D003663 ORTHO05D005327 2.3e-21 106.7 156 37.2
Ca_06459_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 3.1e-21 106.3 189 33.9
TPR.G10569 Trifolium pratense HOM05D003663 ORTHO05D005327 5.2e-21 105.5 128 39.8
Psat2g004440 Pisum sativum HOM05D003663 ORTHO05D005327 8.9e-21 104.8 158 38.0
Ca_00744_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 2.0e-20 103.6 149 36.2
Medtr5g097370 Medicago truncatula HOM05D003663 ORTHO05D005327 3.4e-20 102.8 153 35.3
Phvul.006G141400 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 3.4e-20 102.8 152 35.5
Glyma.14G007200 Glycine max HOM05D003663 ORTHO05D005327 4.4e-20 102.4 188 32.4
CsaV3_7G023690 Cucumis sativus L. HOM05D003663 ORTHO05D005327 7.5e-20 101.7 131 41.2
Lj6g0026147 Lotus japonicus HOM05D003663 ORTHO05D005327 9.8e-20 101.3 151 35.8
Prupe.4G006800 Prunus persica HOM05D003663 ORTHO05D005327 9.8e-20 101.3 128 38.3
C09p06370 Brassica napus HOM05D003663 ORTHO05D005327 1.3e-19 100.9 157 35.0
Psat1g178200 Pisum sativum HOM05D003663 ORTHO05D005327 1.3e-19 100.9 151 36.4
TPR.G1287 Trifolium pratense HOM05D003663 ORTHO05D005327 1.7e-19 100.5 157 33.1
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 2.2e-19 100.1 163 33.7
BcaC04g23626 Brassica carinata HOM05D003663 ORTHO05D005327 2.2e-19 100.1 157 35.0
Lalb_Chr17g0349111 Lupinus albus HOM05D003663 ORTHO05D005327 2.2e-19 100.1 160 33.1
BolC9t53556H Brassica oleracea HOM05D003663 ORTHO05D005327 2.9e-19 99.8 156 35.3
Phvul.008G285700 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 2.9e-19 99.8 152 35.5
Nn1g01862 Nelumbo nucifera HOM05D003663 ORTHO05D005327 3.7e-19 99.4 124 43.5
Actinidia34308 Actinidia chinensis HOM05D003663 ORTHO05D005327 1.1e-18 97.8 78 61.5
Sed0003500 Sechium edule HOM05D003663 ORTHO05D005327 1.1e-18 97.8 156 35.3
A09p05770 Brassica napus HOM05D003663 ORTHO05D005327 1.4e-18 97.4 156 34.0
BraA09t36218Z Brassica rapa HOM05D003663 ORTHO05D005327 1.4e-18 97.4 156 34.0
MELO3C024107.2 Cucumis melo HOM05D003663 ORTHO05D005327 1.4e-18 97.4 157 37.6
arahy.Tifrunner.gnm1.ann1.8QBK2E Arachis hypogaea HOM05D003663 ORTHO05D005327 1.9e-18 97.1 172 33.1
arahy.Tifrunner.gnm1.ann1.P7DY53 Arachis hypogaea HOM05D003663 ORTHO05D005327 1.9e-18 97.1 172 33.1
Glyma.09G012100 Glycine max HOM05D003663 ORTHO05D005327 1.9e-18 97.1 155 34.8
PSO302G0013 Papaver somniferum HOM05D003663 ORTHO05D005327 1.9e-18 97.1 155 38.1
Aqoxy1G04228 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 3.2e-18 96.3 131 37.4
PSO210G1796 Papaver somniferum HOM05D003663 ORTHO05D005327 3.2e-18 96.3 186 37.1
Aqoxy1G04227 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 4.1e-18 95.9 176 35.2
ClCG02G002710 Citrullus lanatus HOM05D003663 ORTHO05D005327 4.1e-18 95.9 151 35.8
FvH4_3g00560 Fragaria vesca HOM05D003663 ORTHO05D005327 5.4e-18 95.5 132 35.6
FAN25G1738 Fragaria x ananassa HOM05D003663 ORTHO05D005327 9.2e-18 94.7 132 36.4
TWI36G0551 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 9.2e-18 94.7 145 34.5
MELO3C028604.2 Cucumis melo HOM05D003663 ORTHO05D005327 1.6e-17 94.0 172 32.6
Thhalv10005288m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 4.6e-17 92.4 135 34.1
PGR142G2458 Punica granatum HOM05D003663 ORTHO05D005327 6.0e-17 92.0 135 38.5
Sed0002316 Sechium edule HOM05D003663 ORTHO05D005327 6.0e-17 92.0 121 35.5
TWI38G0283 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 6.0e-17 92.0 133 32.3
Aqoxy1G04229 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 7.8e-17 91.7 143 32.9
Eucgr.L03441 Eucalyptus grandis HOM05D003663 ORTHO05D005327 1.0e-16 91.3 118 39.0
Sed0016160 Sechium edule HOM05D003663 ORTHO05D005327 2.3e-16 90.1 129 38.0
Sed0020467 Sechium edule HOM05D003663 ORTHO05D005327 5.1e-16 89.0 123 35.0
Actinidia08745 Actinidia chinensis HOM05D000074 ORTHO05D006801 8.6e-16 88.2 82 56.1
Potri.006G016700 Populus trichocarpa HOM05D003663 ORTHO05D005327 1.1e-15 87.8 93 41.9
A06p36830 Brassica napus HOM05D003663 ORTHO05D005327 1.5e-15 87.4 157 32.5
BraA06t26609Z Brassica rapa HOM05D003663 ORTHO05D005327 1.5e-15 87.4 157 32.5
MD09G1122000 Malus domestica HOM05D003663 ORTHO05D005327 1.5e-15 87.4 153 35.9
C07p41660 Brassica napus HOM05D003663 ORTHO05D005327 1.9e-15 87.0 157 32.5
BolC7t44701H Brassica oleracea HOM05D003663 ORTHO05D005327 1.9e-15 87.0 157 32.5
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 3.3e-15 86.3 163 32.5
ClCG01G010650 Citrullus lanatus HOM05D003663 ORTHO05D005327 3.3e-15 86.3 121 33.1
CARHR186960 Cardamine hirsuta HOM05D003663 ORTHO05D005327 4.3e-15 85.9 143 34.3
BcaNung02825 Brassica carinata HOM05D003663 ORTHO05D005327 9.5e-15 84.7 159 31.4
Carub.0006s2423 Capsella rubella HOM05D003663 ORTHO05D005327 1.2e-14 84.3 155 32.9
THA.LOC104826655 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 1.6e-14 84.0 166 31.9
AT5G26730 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 2.1e-14 83.6 154 32.5
AL6G38450 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 2.8e-14 83.2 160 30.6
Ciclev10017620m.g Citrus clementina HOM05D003663 ORTHO05D005327 6.2e-14 82.0 150 35.3
Sp2g21370 Schrenkiella parvula HOM05D003663 ORTHO05D005327 3.1e-13 79.7 127 33.1
BcaB04g19726 Brassica carinata HOM05D003663 ORTHO05D005327 1.1e-10 71.2 154 27.9
BcaB07g29963 Brassica carinata HOM05D003663 ORTHO05D005327 3.2e-10 69.7 90 34.4
SMO290G0002 Selaginella moellendorffii HOM05D005423 ORTHO05D006223 4.1e-10 69.3 97 38.1
CsaV3_7G002660 Cucumis sativus L. HOM05D003663 ORTHO05D005327 9.2e-10 68.2 122 32.8
RcHm_v2.0_Chr2g0156681 Rosa chinensis HOM05D003663 ORTHO05D005327 1.2e-09 67.8 119 30.3
Potri.016G009000 Populus trichocarpa HOM05D003663 ORTHO05D005327 7.8e-09 65.1 60 46.7
Medtr2g026520 Medicago truncatula HOM05D003663 ORTHO05D005327 1.0e-08 64.7 114 34.2
Prupe.3G201600 Prunus persica HOM05D003663 ORTHO05D005327 2.3e-08 63.5 132 33.3
Mapoly0095s0061 Marchantia polymorpha HOM05D005423 ORTHO05D006223 5.1e-08 62.4 153 26.1
SMO220G0003 Selaginella moellendorffii HOM05D002232 ORTHO05D002323 6.6e-08 62.0 161 29.2
Glyma.02G305800 Glycine max HOM05D003663 ORTHO05D005327 7.3e-07 58.5 105 32.4
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 1.6e-06 57.4 99 35.4
Pp3c1_4130 Physcomitrium patens HOM05D022662 ORTHO05D006223 3.6e-06 56.2 145 26.2


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