Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 0.0e+00 1563.5 784 100.0
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 0.0e+00 1194.5 783 80.7
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 0.0e+00 1166.8 782 78.1
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 5.1e-305 1050.8 793 69.7
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 2.5e-304 1048.5 798 69.9
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 1.5e-288 996.1 799 66.8
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 2.0e-288 995.7 578 88.6
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 2.2e-287 992.3 791 67.3
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 9.1e-286 986.9 818 65.0
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 3.5e-285 984.9 816 65.1
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 5.5e-283 977.6 774 68.1
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 3.2e-254 882.1 799 59.7
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 3.5e-253 878.6 862 56.4
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 1.6e-250 869.8 818 57.3
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 1.4e-249 866.7 859 55.5
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 1.7e-247 859.8 814 57.7
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 4.9e-247 858.2 799 58.4
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 5.1e-244 848.2 804 58.0
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 6.6e-244 847.8 805 58.0
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 5.6e-243 844.7 820 56.5
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 2.8e-242 842.4 822 56.7
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 1.8e-241 839.7 807 57.2
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 5.8e-240 834.7 797 56.0
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 3.5e-237 825.5 805 56.8
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 4.6e-237 825.1 813 56.2
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.3e-236 823.5 805 56.4
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.3e-236 823.5 805 56.6
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.3e-236 823.5 810 56.2
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 2.3e-236 822.8 798 55.6
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 3.9e-236 822.0 798 56.6
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 5.1e-236 821.6 807 57.0
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 8.6e-236 820.8 806 56.8
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 1.1e-235 820.5 800 57.0
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 1.9e-235 819.7 801 55.8
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 3.3e-235 818.9 799 54.2
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 4.3e-235 818.5 805 56.3
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 2.8e-234 815.8 806 54.7
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 1.4e-233 813.5 800 56.8
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 1.4e-233 813.5 808 55.2
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 1.2e-232 810.4 809 54.3
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 1.3e-231 807.0 797 54.7
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 2.2e-231 806.2 797 56.8
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 1.3e-228 797.0 809 52.8
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 1.6e-226 790.0 787 52.7
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 6.9e-225 784.6 791 53.4
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 2.6e-224 782.7 798 53.0
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 1.3e-223 780.4 793 53.5
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 2.9e-223 779.2 798 52.9
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 3.8e-223 778.9 801 53.4
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 1.4e-222 776.9 797 54.0
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 2.4e-222 776.2 801 52.4
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 1.6e-221 773.5 802 53.2
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 4.6e-221 771.9 783 53.6
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 1.7e-220 770.0 796 52.4
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 3.9e-220 768.8 805 52.0
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 8.7e-220 767.7 801 52.3
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 1.1e-219 767.3 795 52.1
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 2.5e-219 766.1 822 52.1
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 1.3e-218 763.8 806 54.5
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 1.6e-218 763.5 805 51.7
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 3.6e-218 762.3 824 50.0
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 7.6e-216 754.6 803 51.9
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 1.7e-215 753.4 803 52.7
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 6.4e-215 751.5 796 50.3
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 8.4e-215 751.1 800 51.6
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 1.1e-214 750.7 804 51.1
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 1.9e-214 750.0 796 51.8
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 2.4e-214 749.6 800 51.4
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 3.2e-214 749.2 794 52.0
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 9.3e-214 747.7 798 51.0
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 1.2e-213 747.3 783 52.1
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 1.6e-213 746.9 794 51.9
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 4.6e-213 745.3 800 51.8
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 3.0e-212 742.7 803 51.3
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 5.6e-211 738.4 816 52.1
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 5.6e-211 738.4 792 51.6
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 9.6e-211 737.6 797 49.8
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 4.8e-210 735.3 792 51.5
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 2.9e-207 726.1 805 51.2
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 1.1e-206 724.2 855 47.4
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 7.9e-205 718.0 794 50.4
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.5e-203 713.8 761 51.8
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 1.9e-195 686.8 743 52.1
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 1.6e-194 683.7 638 56.3
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 8.2e-194 681.4 798 47.2
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 1.7e-191 673.7 785 47.1
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 9.4e-190 667.9 595 59.0
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 6.1e-189 665.2 826 47.3
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 1.7e-186 657.1 646 55.0
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 1.4e-182 644.0 651 54.1
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 6.1e-181 638.6 673 51.4
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 2.9e-175 619.8 811 44.6
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 1.4e-172 610.9 781 46.9
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 4.7e-157 559.3 800 42.6
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 2.4e-145 520.4 782 40.8
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 2.3e-119 434.1 307 73.3
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 3.0e-119 433.7 407 61.4
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 6.0e-112 409.5 792 38.0
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 7.3e-102 375.9 789 34.2
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 7.6e-91 339.3 255 65.9
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 1.7e-90 338.2 881 31.8
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 2.4e-84 317.8 259 62.5
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 9.3e-81 305.8 292 53.1
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 1.8e-79 301.6 292 51.7
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 1.3e-77 295.4 858 28.8
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 6.1e-56 223.4 258 53.1
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 4.0e-55 220.7 261 47.5
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 2.9e-42 177.9 227 43.2
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 4.7e-40 170.6 211 43.6
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 5.2e-39 167.2 177 52.0
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-34 151.8 974 21.1
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 6.8e-31 140.2 87 73.6
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 1.5e-25 122.5 165 41.2
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 7.3e-25 120.2 259 36.3
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 5.2e-23 114.0 158 45.6
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 7.0e-20 103.6 879 21.7
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 2.1e-16 92.0 117 43.6
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 1.1e-15 89.7 65 69.2
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 8.3e-13 80.1 71 52.1
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 7.1e-12 77.0 162 32.1
ECA233G4789 Erigeron canadensis HOM05D006677 ORTHO05D008348 1.2e-08 66.2 50 62.0
ECA234G1619 Erigeron canadensis HOM05D000206 ORTHO05D000232 5.2e-07 60.8 49 55.1


User provided reference genes

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