Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 1.0e-47 193.7 155 100.0
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 6.4e-42 174.5 155 83.9
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 3.5e-40 168.7 156 91.7
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 2.6e-35 152.5 154 61.7
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 4.5e-35 151.8 154 77.9
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 2.9e-34 149.1 154 76.6
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 1.9e-33 146.4 154 76.0
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 1.1e-30 137.1 154 73.4
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 2.1e-29 132.9 158 73.4
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 2.9e-26 122.5 159 61.6
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 3.5e-24 115.5 164 70.7
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 5.1e-23 111.7 156 54.5
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 5.1e-23 111.7 161 58.4
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 6.7e-23 111.3 174 60.3
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 8.7e-23 110.9 172 59.9
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 1.5e-22 110.2 170 61.2
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 2.5e-22 109.4 169 63.9
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.5e-22 109.4 154 63.6
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 4.3e-22 108.6 179 62.0
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 4.3e-22 108.6 155 64.5
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 4.3e-22 108.6 155 64.5
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 1.6e-21 106.7 109 56.0
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 1.6e-21 106.7 181 54.7
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 3.7e-21 105.5 181 43.6
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 4.8e-21 105.1 175 64.0
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 4.8e-21 105.1 178 58.4
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 1.1e-20 104.0 172 61.6
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 1.4e-20 103.6 171 60.2
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 2.4e-20 102.8 156 66.0
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 2.4e-20 102.8 172 52.9
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 3.1e-20 102.4 172 60.5
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 6.9e-20 101.3 156 63.5
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 9.0e-20 100.9 118 63.6
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 9.0e-20 100.9 170 42.9
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 1.5e-19 100.1 155 51.6
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 2.0e-19 99.8 160 44.4
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 2.0e-19 99.8 162 43.8
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 2.0e-19 99.8 162 43.8
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 2.0e-19 99.8 175 58.9
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 2.6e-19 99.4 154 44.2
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 2.6e-19 99.4 185 49.7
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 2.6e-19 99.4 175 51.4
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 3.4e-19 99.0 182 58.8
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 4.5e-19 98.6 176 59.1
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 7.6e-19 97.8 124 71.8
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.0e-18 97.4 175 52.6
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 1.3e-18 97.1 157 51.6
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.7e-18 96.7 166 47.6
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.7e-18 96.7 159 42.8
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 1.7e-18 96.7 124 68.5
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 2.2e-18 96.3 177 59.3
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 2.9e-18 95.9 154 51.3
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 2.9e-18 95.9 127 74.0
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 3.8e-18 95.5 159 42.1
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 3.8e-18 95.5 125 66.4
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 5.0e-18 95.1 157 47.8
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 5.0e-18 95.1 154 46.8
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 5.0e-18 95.1 154 46.8
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 5.0e-18 95.1 173 43.9
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 5.0e-18 95.1 113 51.3
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 6.5e-18 94.7 178 58.4
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 6.5e-18 94.7 168 60.1
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 6.5e-18 94.7 135 68.1
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 1.1e-17 94.0 162 42.0
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 1.1e-17 94.0 181 55.8
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 1.4e-17 93.6 110 50.0
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 1.9e-17 93.2 125 60.8
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 1.9e-17 93.2 149 42.3
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 1.9e-17 93.2 86 94.2
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 2.5e-17 92.8 156 49.4
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 2.5e-17 92.8 156 49.4
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 2.5e-17 92.8 156 49.4
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 2.5e-17 92.8 176 57.4
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 2.5e-17 92.8 114 71.9
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 2.5e-17 92.8 132 67.4
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 3.2e-17 92.4 132 67.4
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 4.2e-17 92.0 170 58.2
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 4.2e-17 92.0 160 58.8
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 5.5e-17 91.7 171 39.2
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 5.5e-17 91.7 159 40.3
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 5.5e-17 91.7 171 39.2
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 5.5e-17 91.7 135 67.4
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 9.3e-17 90.9 172 58.7
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 1.2e-16 90.5 87 54.0
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 1.2e-16 90.5 165 57.0
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 1.6e-16 90.1 131 67.2
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 2.1e-16 89.7 172 55.2
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 2.1e-16 89.7 172 58.7
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 2.1e-16 89.7 161 60.2
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 2.7e-16 89.4 109 53.2
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 2.7e-16 89.4 162 59.9
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 3.5e-16 89.0 132 60.6
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 3.5e-16 89.0 111 48.6
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 3.5e-16 89.0 127 68.5
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 4.6e-16 88.6 171 56.7
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 6.1e-16 88.2 168 50.6
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 7.9e-16 87.8 184 46.2
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 7.9e-16 87.8 184 51.6
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 1.0e-15 87.4 156 48.1
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 1.3e-15 87.0 123 67.5
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 1.8e-15 86.7 166 48.8
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.9e-15 85.5 122 47.5
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 5.1e-15 85.1 111 49.5
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 6.7e-15 84.7 169 51.5
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 6.7e-15 84.7 135 64.4
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 6.7e-15 84.7 134 58.2
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 1.1e-14 84.0 183 53.6
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 1.5e-14 83.6 110 49.1
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 1.5e-14 83.6 170 55.3
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 2.5e-14 82.8 125 61.6
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 2.5e-14 82.8 125 61.6
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 2.5e-14 82.8 134 59.0
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 4.3e-14 82.0 151 38.4
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 5.7e-14 81.6 108 50.9
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 5.7e-14 81.6 167 49.7
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 5.7e-14 81.6 107 73.8
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 1.3e-13 80.5 107 50.5
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 2.2e-13 79.7 170 49.4
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 2.8e-13 79.3 173 56.6
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 6.3e-13 78.2 124 58.9
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 1.1e-12 77.4 104 54.8
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 2.4e-12 76.3 150 41.3
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 2.4e-12 76.3 131 58.8
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 4.1e-12 75.5 113 44.2
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 5.3e-12 75.1 110 50.9
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 4.5e-11 72.0 154 51.9
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 2.2e-10 69.7 106 51.9
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 2.9e-10 69.3 124 55.6
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 3.8e-10 68.9 106 40.6
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 5.0e-10 68.6 162 55.6
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 1.1e-09 67.4 106 67.9
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 2.5e-09 66.2 118 58.5
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 4.2e-09 65.5 117 61.5
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 1.6e-08 63.5 122 55.7
Lj9P479T20 Lonicera japonica HOM05D005335 ORTHO05D006472 1.5e-06 57.0 69 87.0


User provided reference genes

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