Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G128900 Glycine max HOM05D000135 ORTHO05D000816 7.4e-21 104.4 141 100.0
Glyma.05G047100 Glycine max HOM05D000135 ORTHO05D000816 1.7e-17 93.2 47 95.7
Lalb_Chr08g0237071 Lupinus albus HOM05D000135 ORTHO05D000816 5.2e-14 81.6 141 85.8
Lj4g0011466 Lotus japonicus HOM05D000135 ORTHO05D000816 1.5e-13 80.1 45 84.4
VMungo1215G1953 Vigna mungo HOM05D000135 ORTHO05D000816 2.0e-13 79.7 141 85.8
Phvul.003G210000 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 9.7e-13 77.4 141 75.9
Thecc.03G127000 Theobroma cacao HOM05D000135 ORTHO05D000816 1.7e-12 76.6 48 75.0
Glyma.04G136600 Glycine max HOM05D000135 ORTHO05D000816 2.2e-12 76.3 48 72.9
Medtr3g089070 Medicago truncatula HOM05D000135 ORTHO05D000816 2.8e-12 75.9 48 70.8
Lj4g0025643 Lotus japonicus HOM05D000135 ORTHO05D000816 3.7e-12 75.5 44 79.5
Medtr3g089090 Medicago truncatula HOM05D000135 ORTHO05D000816 1.1e-11 73.9 47 70.2
Ca_24507_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 1.8e-11 73.2 48 70.8
MELO3C026214.2 Cucumis melo HOM05D000135 ORTHO05D000816 2.4e-11 72.8 45 71.1
Glyma.04G136300 Glycine max HOM05D000135 ORTHO05D000816 2.4e-11 72.8 48 68.8
Ca_00913_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 4.1e-11 72.0 48 70.8
Ca_29979_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 4.1e-11 72.0 48 70.8
CsaV3_1G000650 Cucumis sativus L. HOM05D000135 ORTHO05D000816 4.1e-11 72.0 45 71.1
Glyma.04G136200 Glycine max HOM05D000135 ORTHO05D000816 4.1e-11 72.0 48 68.8
Lalb_Chr12g0202161 Lupinus albus HOM05D000135 ORTHO05D000816 4.1e-11 72.0 141 83.0
Gohir.A03G053400 Gossypium hirsutum HOM05D000135 ORTHO05D000816 7.0e-11 71.2 141 63.8
Duzib084G0108 Durio zibethinus HOM05D000135 ORTHO05D000816 1.2e-10 70.5 48 66.7
Lalb_Chr11g0069631 Lupinus albus HOM05D000135 ORTHO05D000816 1.2e-10 70.5 141 80.1
MD14G1158700 Malus domestica HOM05D000135 ORTHO05D000816 1.2e-10 70.5 42 73.8
Psat5g140800 Pisum sativum HOM05D000135 ORTHO05D000816 1.2e-10 70.5 47 63.8
Sed0012230 Sechium edule HOM05D000135 ORTHO05D000816 1.2e-10 70.5 44 70.5
Duzib205G1548 Durio zibethinus HOM05D000135 ORTHO05D000816 1.6e-10 70.1 48 62.5
Glyma.06G171150 Glycine max HOM05D000135 ORTHO05D000816 2.0e-10 69.7 135 88.1
Lj1g0021536 Lotus japonicus HOM05D000135 ORTHO05D000816 2.0e-10 69.7 48 66.7
TPR.G30002 Trifolium pratense HOM05D000135 ORTHO05D000816 2.0e-10 69.7 48 68.8
Medtr4g103650 Medicago truncatula HOM05D000135 ORTHO05D000816 2.6e-10 69.3 43 74.4
Psat0s14g0160 Pisum sativum HOM05D000135 ORTHO05D000816 2.6e-10 69.3 48 60.4
Glyma.11G157100 Glycine max HOM05D000135 ORTHO05D000816 3.5e-10 68.9 44 68.2
Medtr4g103655 Medicago truncatula HOM05D000135 ORTHO05D000816 3.5e-10 68.9 48 68.8
Ciclev10022753m.g Citrus clementina HOM05D000135 ORTHO05D000816 5.9e-10 68.2 50 62.0
Glyma.04G194800 Glycine max HOM05D000135 ORTHO05D000816 5.9e-10 68.2 41 73.2
Glyma.11G157200 Glycine max HOM05D000135 ORTHO05D000816 5.9e-10 68.2 44 68.2
MD06G1143500 Malus domestica HOM05D000135 ORTHO05D000816 5.9e-10 68.2 42 69.0
Medtr4g103630 Medicago truncatula HOM05D000135 ORTHO05D000816 5.9e-10 68.2 48 66.7
ClCG06G017800 Citrullus lanatus HOM05D000135 ORTHO05D000816 7.7e-10 67.8 44 68.2
Prupe.5G152700 Prunus persica HOM05D000135 ORTHO05D000816 7.7e-10 67.8 135 32.6
RcHm_v2.0_Chr7g0190421 Rosa chinensis HOM05D000135 ORTHO05D000816 7.7e-10 67.8 47 63.8
Duzib068G0781 Durio zibethinus HOM05D000135 ORTHO05D000816 1.0e-09 67.4 48 64.6
Psat0s3961g0120 Pisum sativum HOM05D000135 ORTHO05D000816 1.0e-09 67.4 43 74.4
Gohir.D11G039500 Gossypium hirsutum HOM05D000135 ORTHO05D000816 1.3e-09 67.0 48 62.5
Gorai.007G042400 Gossypium raimondii HOM05D000135 ORTHO05D000816 1.3e-09 67.0 48 62.5
Psat0s3961g0080 Pisum sativum HOM05D000135 ORTHO05D000816 1.7e-09 66.6 42 73.8
Eucgr.B00125 Eucalyptus grandis HOM05D000135 ORTHO05D000816 2.9e-09 65.9 43 65.1
Eucgr.B00127 Eucalyptus grandis HOM05D000135 ORTHO05D000816 2.9e-09 65.9 43 67.4
FvH4_5g08060 Fragaria vesca HOM05D000135 ORTHO05D000816 5.0e-09 65.1 41 68.3
FAN04G2593 Fragaria x ananassa HOM05D000135 ORTHO05D000816 5.0e-09 65.1 41 68.3
FAN08G0825 Fragaria x ananassa HOM05D000135 ORTHO05D000816 5.0e-09 65.1 41 68.3
FAN13G0461 Fragaria x ananassa HOM05D000135 ORTHO05D000816 5.0e-09 65.1 41 68.3
FAN18G3513 Fragaria x ananassa HOM05D000135 ORTHO05D000816 5.0e-09 65.1 41 68.3
Gohir.A11G035900 Gossypium hirsutum HOM05D000135 ORTHO05D000816 5.0e-09 65.1 48 60.4
Phvul.005G026000 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 5.0e-09 65.1 47 61.7
Atru.chr9.1078 Acer truncatum HOM05D000135 ORTHO05D000816 8.5e-09 64.3 136 31.6
Eucgr.B00123 Eucalyptus grandis HOM05D000135 ORTHO05D000816 8.5e-09 64.3 43 65.1
Eucgr.B00124 Eucalyptus grandis HOM05D000135 ORTHO05D000816 8.5e-09 64.3 43 62.8
VMungo1309G1946 Vigna mungo HOM05D000135 ORTHO05D000816 8.5e-09 64.3 40 72.5
Psat4g065400 Pisum sativum HOM05D000135 ORTHO05D000816 1.1e-08 63.9 43 72.1
Glyma.18G177900 Glycine max HOM05D000135 ORTHO05D000816 1.9e-08 63.2 41 68.3
Gohir.A10G155722 Gossypium hirsutum HOM05D000135 ORTHO05D000816 2.5e-08 62.8 44 65.9
Gohir.D10G109651 Gossypium hirsutum HOM05D000135 ORTHO05D000816 2.5e-08 62.8 44 65.9
Phvul.005G026100 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 2.5e-08 62.8 47 59.6
Eucgr.B00128 Eucalyptus grandis HOM05D000135 ORTHO05D000816 3.2e-08 62.4 42 61.9
Potri.002G132500 Populus trichocarpa HOM05D000135 ORTHO05D000816 4.2e-08 62.0 47 53.2
COL.COLO4_17166 Corchorus olitorius HOM05D000135 ORTHO05D000816 5.5e-08 61.6 48 58.3
Lj3g0020733 Lotus japonicus HOM05D000135 ORTHO05D000816 5.5e-08 61.6 46 58.7
Gohir.A07G051650 Gossypium hirsutum HOM05D000135 ORTHO05D000816 2.7e-07 59.3 43 62.8
Gohir.D07G056100 Gossypium hirsutum HOM05D000135 ORTHO05D000816 2.7e-07 59.3 43 62.8
Gorai.001G059500 Gossypium raimondii HOM05D000135 ORTHO05D000816 2.7e-07 59.3 43 62.8
Duzib147G0709 Durio zibethinus HOM05D000135 ORTHO05D000816 3.6e-07 58.9 48 54.2
TAR622G0710 Trochodendron aralioides HOM05D000135 ORTHO05D000816 3.6e-07 58.9 48 52.1
Nitab4.5_0002498g0070 Nicotiana tabacum HOM05D000135 ORTHO05D000816 6.1e-07 58.2 43 58.1
Sabra02G0103700 Salix brachista HOM05D000135 ORTHO05D000816 6.1e-07 58.2 47 51.1
Sabra15G0115400 Salix brachista HOM05D000135 ORTHO05D000816 6.1e-07 58.2 141 75.2
Nitab4.5_0007815g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 8.0e-07 57.8 42 59.5
Solyc11g071740.2 Solanum lycopersicum HOM05D000135 ORTHO05D000816 8.0e-07 57.8 42 59.5
Sopen11g029410 Solanum pennellii HOM05D000135 ORTHO05D000816 8.0e-07 57.8 42 59.5
PGSC0003DMG400040538 Solanum tuberosum HOM05D000135 ORTHO05D000816 8.0e-07 57.8 42 59.5
PGSC0003DMG400045603 Solanum tuberosum HOM05D000135 ORTHO05D000816 8.0e-07 57.8 42 59.5
Psat1g085520 Pisum sativum HOM05D000135 ORTHO05D000816 1.0e-06 57.4 48 54.2
Haze_07233 Corylus avellana HOM05D000135 ORTHO05D000816 1.4e-06 57.0 49 53.1
Manes.17G104400 Manihot esculenta HOM05D000135 ORTHO05D000816 1.4e-06 57.0 43 60.5
Nitab4.5_0002498g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 1.4e-06 57.0 42 59.5
Peaxi162Scf00098g00156 Petunia axillaris HOM05D000135 ORTHO05D000816 1.4e-06 57.0 43 58.1
Potri.001G332900 Populus trichocarpa HOM05D000135 ORTHO05D000816 1.4e-06 57.0 48 52.1
QL02p016339 Quercus lobata HOM05D000135 ORTHO05D000816 1.4e-06 57.0 43 58.1
PGSC0003DMG400002993 Solanum tuberosum HOM05D000135 ORTHO05D000816 1.4e-06 57.0 42 59.5
Thecc.04G033300 Theobroma cacao HOM05D000135 ORTHO05D000816 1.4e-06 57.0 48 52.1
Atru.chr6.2532 Acer truncatum HOM05D000135 ORTHO05D000816 1.8e-06 56.6 48 52.1
Manes.15G159100 Manihot esculenta HOM05D000135 ORTHO05D000816 1.8e-06 56.6 43 60.5
Prupe.3G303600 Prunus persica HOM05D000135 ORTHO05D000816 1.8e-06 56.6 48 54.2
Solyc06g073830.1 Solanum lycopersicum HOM05D000135 ORTHO05D000816 1.8e-06 56.6 42 57.1
Sopen06g030230 Solanum pennellii HOM05D000135 ORTHO05D000816 1.8e-06 56.6 42 57.1
PGSC0003DMG400005909 Solanum tuberosum HOM05D000135 ORTHO05D000816 1.8e-06 56.6 42 57.1
SGA_v2.0_scaffold47G17572 Striga asiatica HOM05D000135 ORTHO05D000816 1.8e-06 56.6 48 54.2
TWI12G0256 Tripterygium wilfordii HOM05D000135 ORTHO05D000816 1.8e-06 56.6 48 54.2
MD17G1014200 Malus domestica HOM05D000135 ORTHO05D000816 2.3e-06 56.2 48 54.2
Peaxi162Scf00259g00126 Petunia axillaris HOM05D000135 ORTHO05D000816 2.3e-06 56.2 42 57.1
CAN.G742.5 Capsicum annuum HOM05D000135 ORTHO05D000816 3.0e-06 55.8 43 55.8
Eucgr.F03632 Eucalyptus grandis HOM05D000135 ORTHO05D000816 3.0e-06 55.8 45 53.3
QL02p016392 Quercus lobata HOM05D000135 ORTHO05D000816 3.0e-06 55.8 44 56.8
TAR622G0218 Trochodendron aralioides HOM05D000135 ORTHO05D000816 3.0e-06 55.8 48 50.0
QL10p004084 Quercus lobata HOM05D000135 ORTHO05D000816 4.0e-06 55.5 46 50.0
Solyc11g071760.3 Solanum lycopersicum HOM05D000135 ORTHO05D000816 4.0e-06 55.5 42 57.1
Sopen11g029420 Solanum pennellii HOM05D000135 ORTHO05D000816 4.0e-06 55.5 42 57.1
Sopen11g029430 Solanum pennellii HOM05D000135 ORTHO05D000816 4.0e-06 55.5 42 57.1
GSVIVG01008516001 Vitis vinifera HOM05D000135 ORTHO05D000816 4.0e-06 55.5 48 50.0
Cfa021347 Carpinus fangiana HOM05D000135 ORTHO05D000816 5.2e-06 55.1 48 50.0
Dinv14818 Davidia involucrata HOM05D000135 ORTHO05D000816 5.2e-06 55.1 44 54.5
Gohir.D04G078000 Gossypium hirsutum HOM05D000135 ORTHO05D000816 5.2e-06 55.1 48 52.1
Gorai.012G087800 Gossypium raimondii HOM05D000135 ORTHO05D000816 5.2e-06 55.1 48 52.1
Nitab4.5_0000875g0030 Nicotiana tabacum HOM05D000135 ORTHO05D000816 5.2e-06 55.1 40 60.0
Nitab4.5_0002183g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000816 5.2e-06 55.1 40 60.0
Potri.005G259900 Populus trichocarpa HOM05D000135 ORTHO05D000816 5.2e-06 55.1 42 54.8
QL02p016421 Quercus lobata HOM05D000135 ORTHO05D000816 5.2e-06 55.1 44 54.5
QL02p016429 Quercus lobata HOM05D000135 ORTHO05D000816 5.2e-06 55.1 42 57.1
SalBow1G7946 Salvia bowleyana HOM05D000135 ORTHO05D000816 5.2e-06 55.1 47 51.1
SalBow7G1515 Salvia bowleyana HOM05D000135 ORTHO05D000816 5.2e-06 55.1 47 51.1
GSVIVG01010383001 Vitis vinifera HOM05D000135 ORTHO05D000816 5.2e-06 55.1 48 47.9
CAN.G1463.22 Capsicum annuum HOM05D000135 ORTHO05D000816 6.7e-06 54.7 42 54.8
MD09G1013600 Malus domestica HOM05D000135 ORTHO05D000816 6.7e-06 54.7 48 52.1
PGSC0003DMG400002994 Solanum tuberosum HOM05D000135 ORTHO05D000816 6.7e-06 54.7 42 57.1
CiPaw.07G129800 Carya illinoinensis HOM05D000135 ORTHO05D000816 8.8e-06 54.3 43 53.5
Lju41C51T3 Lonicera japonica HOM05D000135 ORTHO05D000816 8.8e-06 54.3 43 55.8
QL02p071822 Quercus lobata HOM05D000135 ORTHO05D000816 8.8e-06 54.3 43 53.5
GSVIVG01013467001 Vitis vinifera HOM05D000135 ORTHO05D000816 8.8e-06 54.3 44 52.3


User provided reference genes

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