Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G127300 Glycine max HOM05D008121 ORTHO05D009878 1.8e-85 319.3 172 100.0
Glyma.05G045100 Glycine max HOM05D008121 ORTHO05D009878 8.1e-70 267.3 174 86.8
Phvul.003G208400 Phaseolus vulgaris HOM05D008121 ORTHO05D009878 9.3e-58 227.3 172 77.3
VMungo1215G2720 Vigna mungo HOM05D000290 ORTHO05D004630 6.9e-53 211.1 172 72.7
arahy.Tifrunner.gnm1.ann1.DV5N5R Arachis hypogaea HOM05D008121 ORTHO05D009878 5.5e-26 121.7 174 51.1
arahy.Tifrunner.gnm1.ann1.YZZN9M Arachis hypogaea HOM05D008121 ORTHO05D009878 2.1e-25 119.8 174 50.6
Lalb_Chr13g0297421 Lupinus albus HOM05D008121 ORTHO05D009878 2.5e-23 112.8 152 50.0
Ca_05561_v3 Cicer arietinum L. HOM05D008121 ORTHO05D009878 9.1e-21 104.4 165 49.1
Medtr4g104040 Medicago truncatula HOM05D008121 ORTHO05D009878 4.5e-20 102.1 162 46.9
Lj4g0024363 Lotus japonicus HOM05D008121 ORTHO05D009878 2.9e-19 99.4 186 44.1
TPR.G37567 Trifolium pratense HOM05D008121 ORTHO05D009878 2.1e-17 93.2 191 46.6
Psat4g064880 Pisum sativum HOM05D008121 ORTHO05D009878 4.7e-17 92.0 166 45.2
RcHm_v2.0_Chr7g0190901 Rosa chinensis HOM05D008121 ORTHO05D009878 4.4e-15 85.5 178 37.6
Haze_07274 Corylus avellana HOM05D008121 ORTHO05D009878 2.2e-14 83.2 173 35.8
Potri.015G091100 Populus trichocarpa HOM05D008121 ORTHO05D009878 3.1e-13 79.3 164 38.4
CiPaw.12G036100 Carya illinoinensis HOM05D008121 ORTHO05D009878 1.5e-12 77.0 169 36.7
MD06G1149100 Malus domestica HOM05D008121 ORTHO05D009878 7.7e-12 74.7 174 37.9
Prupe.5G156300 Prunus persica HOM05D008121 ORTHO05D009878 1.0e-11 74.3 192 35.4
Atru.chr9.1017 Acer truncatum HOM05D008121 ORTHO05D009878 1.7e-11 73.6 164 37.2
Cpa.g.sc4.77 Carica papaya HOM05D008121 ORTHO05D009878 2.2e-11 73.2 157 38.9
FvH4_5g07590 Fragaria vesca HOM05D008121 ORTHO05D009878 2.2e-11 73.2 178 34.3
Hma1.2p1_0014F.1_g009910 Hydrangea macrophylla HOM05D008121 ORTHO05D009878 2.2e-11 73.2 152 40.1
Manes.14G055100 Manihot esculenta HOM05D008121 ORTHO05D009878 8.5e-11 71.2 178 36.5
FAN08G2628 Fragaria x ananassa HOM05D000290 ORTHO05D004630 1.1e-10 70.9 152 39.5
TWI14G0571 Tripterygium wilfordii HOM05D008121 ORTHO05D009878 1.1e-10 70.9 173 36.4
Cfa018889 Carpinus fangiana HOM05D008121 ORTHO05D009878 1.4e-10 70.5 171 35.1
CiPaw.11G011700 Carya illinoinensis HOM05D008121 ORTHO05D009878 2.5e-10 69.7 183 33.9
FAN04G1418 Fragaria x ananassa HOM05D000290 ORTHO05D004630 3.2e-10 69.3 162 35.8
Sabra15G0113100 Salix brachista HOM05D000290 ORTHO05D004630 7.2e-10 68.2 202 33.2
QL10p005006 Quercus lobata HOM05D008121 ORTHO05D009878 9.4e-10 67.8 163 40.5
MELO3C002337.2 Cucumis melo HOM05D008121 ORTHO05D009878 2.1e-09 66.6 180 36.7
Duzib084G1233 Durio zibethinus HOM05D008121 ORTHO05D009878 2.1e-09 66.6 151 38.4
Aa31LG4G17080 Aethionema arabicum HOM05D011481 ORTHO05D009878 2.7e-09 66.2 129 38.8
Sed0025515 Sechium edule HOM05D008121 ORTHO05D009878 1.0e-08 64.3 183 34.4
Dinv38465 Davidia involucrata HOM05D008121 ORTHO05D009878 1.4e-08 63.9 155 37.4
Gohir.A09G245200 Gossypium hirsutum HOM05D008121 ORTHO05D009878 3.9e-08 62.4 174 34.5
ClCG03G003530 Citrullus lanatus HOM05D008121 ORTHO05D009878 5.2e-08 62.0 104 43.3
Dinv02922 Davidia involucrata HOM05D008121 ORTHO05D009878 5.2e-08 62.0 155 37.4
COL.COLO4_03517 Corchorus olitorius HOM05D008121 ORTHO05D009878 8.8e-08 61.2 146 38.4
Thecc.03G123300 Theobroma cacao HOM05D008121 ORTHO05D009878 8.8e-08 61.2 177 36.7
Duzib205G1258 Durio zibethinus HOM05D008121 ORTHO05D009878 2.0e-07 60.1 192 34.4
AUR62001288 Chenopodium quinoa HOM05D008121 ORTHO05D009878 5.7e-07 58.5 160 38.1
THA.LOC104821506 Tarenaya hassleriana HOM05D011481 ORTHO05D009878 5.7e-07 58.5 142 37.3
Ciclev10023121m.g Citrus clementina HOM05D008121 ORTHO05D009878 9.7e-07 57.8 47 66.0
Ciclev10024026m.g Citrus clementina HOM05D008121 ORTHO05D009878 9.7e-07 57.8 47 66.0
Gorai.006G270600 Gossypium raimondii HOM05D008121 ORTHO05D009878 9.7e-07 57.8 155 38.7
Gohir.D09G246100 Gossypium hirsutum HOM05D008121 ORTHO05D009878 1.3e-06 57.4 155 38.7
BcaB01g00807 Brassica carinata HOM05D011481 ORTHO05D009878 2.2e-06 56.6 58 44.8
CANSAT80G0868 Cannabis sativa HOM05D008121 ORTHO05D009878 2.2e-06 56.6 168 36.9
EL10Ac7g18085 Beta vulgaris HOM05D008121 ORTHO05D009878 6.3e-06 55.1 156 34.0
PSO339G0123 Papaver somniferum HOM05D008121 ORTHO05D009878 6.3e-06 55.1 65 49.2
Ah.15g095290 Amaranthus hybridus HOM05D001185 ORTHO05D002551 8.2e-06 54.7 131 35.9
GSVIVG01007536001 Vitis vinifera HOM05D008121 ORTHO05D009878 8.2e-06 54.7 166 32.5


User provided reference genes

Program Settings