Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 1.6e-49 199.1 105 100.0
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 6.5e-46 187.2 104 93.3
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 8.2e-41 170.2 104 85.6
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 9.4e-37 156.8 104 77.9
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 1.4e-35 152.9 104 77.9
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 3.0e-35 151.8 104 79.8
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 5.7e-34 147.5 104 71.2
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 2.8e-33 145.2 106 72.6
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 9.1e-32 140.2 104 75.0
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 5.9e-31 137.5 95 72.6
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 2.9e-30 135.2 102 71.6
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 8.5e-30 133.7 105 69.5
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 1.1e-29 133.3 106 68.9
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 1.5e-29 132.9 104 67.3
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 2.5e-29 132.1 110 66.4
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 3.2e-29 131.7 104 65.4
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 1.2e-28 129.8 106 68.9
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 1.6e-28 129.4 102 71.6
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 1.6e-28 129.4 105 68.6
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 1.6e-28 129.4 104 66.3
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 2.7e-28 128.6 102 67.6
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 2.7e-28 128.6 90 74.4
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 3.6e-28 128.3 107 68.2
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 3.6e-28 128.3 105 62.9
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 6.1e-28 127.5 107 68.2
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 1.0e-27 126.7 105 65.7
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.0e-27 126.7 107 67.3
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.4e-27 126.3 107 66.4
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 1.8e-27 125.9 96 67.7
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 4.0e-27 124.8 104 64.4
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 4.0e-27 124.8 103 70.9
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 4.0e-27 124.8 105 66.7
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 8.8e-27 123.6 104 62.5
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 1.1e-26 123.2 105 65.7
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 1.1e-26 123.2 105 63.8
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 2.0e-26 122.5 104 65.4
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 2.0e-26 122.5 108 65.7
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 2.0e-26 122.5 104 63.5
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 2.0e-26 122.5 102 63.7
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 2.6e-26 122.1 100 65.0
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 3.3e-26 121.7 101 67.3
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 3.3e-26 121.7 100 65.0
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 4.4e-26 121.3 102 65.7
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 1.3e-25 119.8 99 64.6
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 1.7e-25 119.4 102 62.7
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 1.7e-25 119.4 99 64.6
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 2.2e-25 119.0 100 63.0
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 2.2e-25 119.0 100 63.0
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 2.2e-25 119.0 102 64.7
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 2.8e-25 118.6 100 62.0
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 3.7e-25 118.2 99 63.6
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 3.7e-25 118.2 99 63.6
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 3.7e-25 118.2 99 63.6
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 3.7e-25 118.2 99 63.6
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 6.3e-25 117.5 100 63.0
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 6.3e-25 117.5 99 64.6
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 6.3e-25 117.5 124 58.9
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 1.8e-24 115.9 105 59.0
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 2.4e-24 115.5 100 63.0
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 4.1e-24 114.8 102 58.8
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 5.3e-24 114.4 105 64.8
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 9.1e-24 113.6 105 58.1
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 9.1e-24 113.6 105 58.1
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 1.2e-23 113.2 105 57.1
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 1.6e-23 112.8 105 58.1
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 2.0e-23 112.5 100 63.0
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 2.0e-23 112.5 106 61.3
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 2.7e-23 112.1 107 62.6
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 2.7e-23 112.1 105 57.1
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 7.7e-23 110.5 101 60.4
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 7.7e-23 110.5 101 60.4
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 1.3e-22 109.8 102 56.9
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 1.3e-22 109.8 104 57.7
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 2.2e-22 109.0 104 63.5
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 5.0e-22 107.8 102 55.9
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 8.5e-22 107.1 101 58.4
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 1.1e-21 106.7 104 56.7
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 1.1e-21 106.7 98 56.1
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 9.4e-21 103.6 104 53.8
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 2.7e-20 102.1 81 71.6
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 5.2e-19 97.8 81 65.4
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 5.2e-19 97.8 67 77.6
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 1.5e-18 96.3 81 64.2
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 2.0e-18 95.9 109 53.2
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 5.7e-18 94.4 103 54.4
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 9.8e-18 93.6 108 51.9
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 1.7e-17 92.8 67 73.1
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 4.8e-17 91.3 96 51.0
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 8.3e-17 90.5 103 51.5
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 8.3e-17 90.5 74 70.3
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 8.3e-17 90.5 67 70.1
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 2.4e-16 89.0 113 46.9
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 4.1e-16 88.2 101 48.5
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 9.1e-16 87.0 67 68.7
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 2.7e-15 85.5 103 49.5
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 1.7e-14 82.8 61 75.4
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 2.2e-14 82.4 82 56.1
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 2.2e-14 82.4 66 66.7
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 9.5e-13 77.0 68 57.4
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 6.1e-12 74.3 50 74.0
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 2.3e-11 72.4 54 72.2
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 2.3e-11 72.4 53 73.6
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 5.2e-11 71.2 50 76.0
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 1.2e-10 70.1 52 71.2
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.5e-10 67.4 53 69.8
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 4.9e-09 64.7 53 62.3
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 5.9e-07 57.8 104 36.5
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 1.7e-06 56.2 39 71.8


User provided reference genes

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