Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G121800 Glycine max HOM05D005816 ORTHO05D006915 8.4e-55 216.9 115 100.0
Glyma.05G013600 Glycine max HOM05D005816 ORTHO05D006915 1.1e-38 163.3 121 81.8
Phvul.003G177600 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 2.4e-25 119.0 119 63.9
TPR.G26768 Trifolium pratense HOM05D005816 ORTHO05D006915 2.1e-21 105.9 121 59.5
Lalb_Chr07g0178581 Lupinus albus HOM05D005816 ORTHO05D006915 4.6e-21 104.8 123 58.5
Psat4g043720 Pisum sativum HOM05D005816 ORTHO05D006915 6.7e-20 100.9 115 60.9
Lj4g0025770 Lotus japonicus HOM05D005816 ORTHO05D006915 7.4e-19 97.4 113 56.6
Lalb_Chr13g0302361 Lupinus albus HOM05D005816 ORTHO05D006915 9.0e-17 90.5 117 54.7
Atru.chr11.1371 Acer truncatum HOM05D005816 ORTHO05D006915 1.1e-14 83.6 127 44.1
Duzib205G0672 Durio zibethinus HOM05D005816 ORTHO05D006915 2.5e-14 82.4 115 53.0
Ciclev10033717m.g Citrus clementina HOM05D005816 ORTHO05D006915 9.4e-14 80.5 127 42.5
VMungo1215G1388 Vigna mungo HOM05D005816 ORTHO05D006915 1.6e-13 79.7 117 52.1
Hma1.2p1_0862F.1_g229870 Hydrangea macrophylla HOM05D005816 ORTHO05D006915 2.7e-13 79.0 114 46.5
COL.COLO4_22708 Corchorus olitorius HOM05D005816 ORTHO05D006915 4.6e-13 78.2 117 54.7
Potri.010G130400 Populus trichocarpa HOM05D005816 ORTHO05D006915 6.1e-13 77.8 117 44.4
TAR629G1032 Trochodendron aralioides HOM05D005816 ORTHO05D006915 6.1e-13 77.8 115 46.1
Oeu041876.1 Olea europaea HOM05D005816 ORTHO05D006915 7.9e-13 77.4 115 42.6
Oeu044626.1 Olea europaea HOM05D005816 ORTHO05D006915 1.8e-12 76.3 114 46.5
Gohir.D07G042900 Gossypium hirsutum HOM05D005816 ORTHO05D006915 3.0e-12 75.5 117 41.9
Gohir.A07G038800 Gossypium hirsutum HOM05D005816 ORTHO05D006915 3.9e-12 75.1 107 44.9
Gorai.007G007600 Gossypium raimondii HOM05D005816 ORTHO05D006915 3.9e-12 75.1 118 44.9
PGR119G1376 Punica granatum HOM05D005816 ORTHO05D006915 3.9e-12 75.1 120 42.5
VMungo0720G2795 Vigna mungo HOM05D005816 ORTHO05D006915 3.9e-12 75.1 114 42.1
Aqoxy3G00384 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 8.8e-12 73.9 113 46.0
Gohir.D11G006300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 8.8e-12 73.9 121 43.8
Medtr8g076990 Medicago truncatula HOM05D005816 ORTHO05D006915 8.8e-12 73.9 78 52.6
Thecc.02G362100 Theobroma cacao HOM05D005816 ORTHO05D006915 8.8e-12 73.9 107 47.7
Duzib248G0754 Durio zibethinus HOM05D005816 ORTHO05D006915 2.0e-11 72.8 108 42.6
Solyc05g009915.1 Solanum lycopersicum HOM05D005816 ORTHO05D006915 2.0e-11 72.8 119 47.9
CSS0007623 Camellia sinensis var. sinensis HOM05D005816 ORTHO05D006915 2.5e-11 72.4 114 43.9
Thecc.03G027700 Theobroma cacao HOM05D005816 ORTHO05D006915 2.5e-11 72.4 104 46.2
Gorai.001G045900 Gossypium raimondii HOM05D005816 ORTHO05D006915 3.3e-11 72.0 117 41.0
Duzib251G0462 Durio zibethinus HOM05D005816 ORTHO05D006915 4.3e-11 71.6 114 40.4
Potri.008G115600 Populus trichocarpa HOM05D005816 ORTHO05D006915 4.3e-11 71.6 118 41.5
Prupe.5G216700 Prunus persica HOM05D005816 ORTHO05D006915 4.3e-11 71.6 117 44.4
Sabra08G0087500 Salix brachista HOM05D005816 ORTHO05D006915 4.3e-11 71.6 108 42.6
Gohir.A11G007200 Gossypium hirsutum HOM05D005816 ORTHO05D006915 5.7e-11 71.2 122 44.3
QL01p001040 Quercus lobata HOM05D005816 ORTHO05D006915 5.7e-11 71.2 120 40.0
Sopen03g038660 Solanum pennellii HOM05D005816 ORTHO05D006915 7.4e-11 70.9 66 57.6
COL.COLO4_07860 Corchorus olitorius HOM05D005816 ORTHO05D006915 9.7e-11 70.5 120 41.7
Manes.05G118800 Manihot esculenta HOM05D005816 ORTHO05D006915 9.7e-11 70.5 102 48.0
QL10p023002 Quercus lobata HOM05D005816 ORTHO05D006915 9.7e-11 70.5 109 51.4
Potri.012G059600 Populus trichocarpa HOM05D005816 ORTHO05D006915 1.3e-10 70.1 111 43.2
PGSC0003DMG400005703 Solanum tuberosum HOM05D005816 ORTHO05D006915 1.3e-10 70.1 66 57.6
Phvul.007G101800 Phaseolus vulgaris HOM05D005816 ORTHO05D006915 1.7e-10 69.7 103 42.7
PGSC0003DMG400000830 Solanum tuberosum HOM05D005816 ORTHO05D006915 2.2e-10 69.3 115 45.2
CiPaw.16G083700 Carya illinoinensis HOM05D005816 ORTHO05D006915 2.8e-10 68.9 118 49.2
Cc11_g10680 Coffea canephora HOM05D005816 ORTHO05D006915 2.8e-10 68.9 111 37.8
Dinv36900 Davidia involucrata HOM05D005816 ORTHO05D006915 2.8e-10 68.9 53 62.3
MD06G1210600 Malus domestica HOM05D005816 ORTHO05D006915 2.8e-10 68.9 124 40.3
Manes.06G073000 Manihot esculenta HOM05D005816 ORTHO05D006915 2.8e-10 68.9 121 38.8
Atru.chr9.746 Acer truncatum HOM05D005816 ORTHO05D006915 3.7e-10 68.6 67 62.7
Cpa.g.sc13.61 Carica papaya HOM05D005816 ORTHO05D006915 3.7e-10 68.6 63 69.8
CiPaw.16G002600 Carya illinoinensis HOM05D005816 ORTHO05D006915 4.8e-10 68.2 112 42.0
FvH4_5g12751 Fragaria vesca HOM05D005816 ORTHO05D006915 6.3e-10 67.8 110 47.3
Lalb_Chr21g0313371 Lupinus albus HOM05D005816 ORTHO05D006915 6.3e-10 67.8 115 42.6
Manes.14G096700 Manihot esculenta HOM05D005816 ORTHO05D006915 6.3e-10 67.8 117 40.2
SalBow8G0077 Salvia bowleyana HOM05D005816 ORTHO05D006915 6.3e-10 67.8 120 40.8
Migut.E00293 Erythranthe guttata HOM05D005816 ORTHO05D006915 8.2e-10 67.4 66 54.5
Lsat_1_v5_gn_4_112260 Lactuca sativa HOM05D005816 ORTHO05D006915 8.2e-10 67.4 63 57.1
Oeu024099.1 Olea europaea HOM05D005816 ORTHO05D006915 8.2e-10 67.4 113 43.4
TPR.G9813 Trifolium pratense HOM05D005816 ORTHO05D006915 8.2e-10 67.4 113 38.1
Thhalv10019753m.g Eutrema salsugineum HOM05D005816 ORTHO05D006915 1.1e-09 67.0 110 40.9
Sc11g0003040 Simmondsia chinensis HOM05D005816 ORTHO05D006915 1.4e-09 66.6 88 45.5
FAN18G0325 Fragaria x ananassa HOM05D005816 ORTHO05D006915 1.8e-09 66.2 110 46.4
HanXRQChr16g0528861 Helianthus annuus HOM05D005816 ORTHO05D006915 1.8e-09 66.2 113 39.8
CiPaw.15G002700 Carya illinoinensis HOM05D005816 ORTHO05D006915 2.4e-09 65.9 130 38.5
Glyma.10G205100 Glycine max HOM05D005816 ORTHO05D006915 2.4e-09 65.9 117 37.6
Aa31LG4G4260 Aethionema arabicum HOM05D005816 ORTHO05D006915 4.1e-09 65.1 62 54.8
HanXRQChr05g0149681 Helianthus annuus HOM05D005816 ORTHO05D006915 4.1e-09 65.1 106 40.6
Sopen05g005720 Solanum pennellii HOM05D005816 ORTHO05D006915 4.1e-09 65.1 87 56.3
AL2G33800 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 5.3e-09 64.7 113 44.2
BolC6t39843H Brassica oleracea HOM05D005816 ORTHO05D006915 5.3e-09 64.7 110 41.8
PGR044G2006 Punica granatum HOM05D005816 ORTHO05D006915 5.3e-09 64.7 107 46.7
AT1G73965 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 6.9e-09 64.3 113 43.4
CARHR067080 Cardamine hirsuta HOM05D005816 ORTHO05D006915 6.9e-09 64.3 112 42.0
Lalb_Chr10g0099661 Lupinus albus HOM05D005816 ORTHO05D006915 6.9e-09 64.3 118 40.7
Carub.0002s2074 Capsella rubella HOM05D005816 ORTHO05D006915 9.1e-09 63.9 113 41.6
Migut.L01100 Erythranthe guttata HOM05D005816 ORTHO05D006915 9.1e-09 63.9 54 61.1
Glyma.20G185400 Glycine max HOM05D005816 ORTHO05D006915 9.1e-09 63.9 117 40.2
Nn3g17700 Nelumbo nucifera HOM05D005816 ORTHO05D006915 9.1e-09 63.9 119 39.5
BcaB05g24412 Brassica carinata HOM05D005816 ORTHO05D006915 3.4e-08 62.0 127 36.2
BcaC08g46825 Brassica carinata HOM05D005816 ORTHO05D006915 3.4e-08 62.0 110 39.1
Carub.0002s1536 Capsella rubella HOM05D005816 ORTHO05D006915 4.5e-08 61.6 126 34.9
HanXRQChr16g0502081 Helianthus annuus HOM05D005816 ORTHO05D006915 4.5e-08 61.6 65 58.5
Lsat_1_v5_gn_4_19200 Lactuca sativa HOM05D005816 ORTHO05D006915 4.5e-08 61.6 113 38.1
Aa31sc79G90 Aethionema arabicum HOM05D005816 ORTHO05D006915 5.9e-08 61.2 119 38.7
MELO3C017284.2 Cucumis melo HOM05D005816 ORTHO05D006915 5.9e-08 61.2 113 46.9
FvH4_4g28190 Fragaria vesca HOM05D005816 ORTHO05D006915 5.9e-08 61.2 124 36.3
FAN12G1213 Fragaria x ananassa HOM05D005816 ORTHO05D006915 5.9e-08 61.2 124 36.3
Gorai.013G079400 Gossypium raimondii HOM05D005816 ORTHO05D006915 5.9e-08 61.2 121 40.5
AL2G27750 Arabidopsis lyrata HOM05D005816 ORTHO05D006915 7.7e-08 60.8 118 39.0
CiPaw.15G126000 Carya illinoinensis HOM05D005816 ORTHO05D006915 7.7e-08 60.8 121 42.1
Nn4g23710 Nelumbo nucifera HOM05D005816 ORTHO05D006915 7.7e-08 60.8 129 44.2
A07p39820 Brassica napus HOM05D005816 ORTHO05D006915 1.0e-07 60.5 110 39.1
BraA07t31528Z Brassica rapa HOM05D005816 ORTHO05D006915 1.0e-07 60.5 110 39.1
Eucgr.G02356 Eucalyptus grandis HOM05D005816 ORTHO05D006915 1.0e-07 60.5 67 52.2
Thhalv10019343m.g Eutrema salsugineum HOM05D005816 ORTHO05D006915 1.0e-07 60.5 127 36.2
Gohir.D13G069300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 1.0e-07 60.5 121 40.5
RcHm_v2.0_Chr4g0435951 Rosa chinensis HOM05D005816 ORTHO05D006915 1.0e-07 60.5 125 35.2
MD14G1221300 Malus domestica HOM05D005816 ORTHO05D006915 1.3e-07 60.1 123 39.0
FAN17G1568 Fragaria x ananassa HOM05D005816 ORTHO05D006915 1.7e-07 59.7 124 34.7
Manes.01G021100 Manihot esculenta HOM05D005816 ORTHO05D006915 1.7e-07 59.7 66 48.5
Aqoxy3G03898 Aquilegia oxysepala HOM05D005816 ORTHO05D006915 2.2e-07 59.3 113 41.6
Lsat_1_v5_gn_3_58221 Lactuca sativa HOM05D005816 ORTHO05D006915 2.2e-07 59.3 104 40.4
Prupe.1G304500 Prunus persica HOM05D005816 ORTHO05D006915 2.2e-07 59.3 137 36.5
Sed0000064 Sechium edule HOM05D005816 ORTHO05D006915 2.9e-07 58.9 114 37.7
BcaC08g46328 Brassica carinata HOM05D005816 ORTHO05D006915 3.8e-07 58.5 122 35.2
BolC6t39316H Brassica oleracea HOM05D005816 ORTHO05D006915 3.8e-07 58.5 122 35.2
CARHR061620 Cardamine hirsuta HOM05D005816 ORTHO05D006915 3.8e-07 58.5 121 36.4
FAN07G2890 Fragaria x ananassa HOM05D005816 ORTHO05D006915 3.8e-07 58.5 127 36.2
Sp5g29165 Schrenkiella parvula HOM05D005816 ORTHO05D006915 3.8e-07 58.5 110 39.1
Gohir.A13G071300 Gossypium hirsutum HOM05D005816 ORTHO05D006915 5.0e-07 58.2 121 38.8
Medtr1g093800 Medicago truncatula HOM05D005816 ORTHO05D006915 5.0e-07 58.2 113 34.5
C06p48080 Brassica napus HOM05D005816 ORTHO05D006915 6.5e-07 57.8 110 40.0
Eucgr.B00694 Eucalyptus grandis HOM05D005816 ORTHO05D006915 6.5e-07 57.8 98 49.0
SGA_v2.0_scaffold59G20629 Striga asiatica HOM05D005816 ORTHO05D006915 1.1e-06 57.0 63 42.9
Sed0012991 Sechium edule HOM05D005816 ORTHO05D006915 1.4e-06 56.6 68 55.9
MELO3C005357.2 Cucumis melo HOM05D005816 ORTHO05D006915 1.9e-06 56.2 120 35.8
AT1G68795 Arabidopsis thaliana HOM05D005816 ORTHO05D006915 2.5e-06 55.8 123 37.4
Sp5g23900 Schrenkiella parvula HOM05D005816 ORTHO05D006915 3.2e-06 55.5 126 42.9
BcaB03g15849 Brassica carinata HOM05D005816 ORTHO05D006915 4.2e-06 55.1 124 33.9
ClCG01G005730 Citrullus lanatus HOM05D005816 ORTHO05D006915 4.2e-06 55.1 109 37.6
Gohir.A03G097050 Gossypium hirsutum HOM05D005816 ORTHO05D006915 9.4e-06 53.9 29 79.3
MBI16_g06255_MAGBIO Magnolia biondii HOM05D005816 ORTHO05D006915 9.4e-06 53.9 113 37.2
Sc04g0003730 Simmondsia chinensis HOM05D005816 ORTHO05D006915 9.4e-06 53.9 53 50.9


User provided reference genes

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