Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 4.4e-58 227.6 106 100.0
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 1.6e-55 219.2 106 96.2
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 8.0e-52 206.8 104 90.4
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 3.4e-50 201.4 104 88.5
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 2.8e-49 198.4 106 85.8
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 1.1e-45 186.4 102 80.4
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 9.5e-45 183.3 103 80.6
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 8.8e-43 176.8 105 73.3
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 8.8e-43 176.8 105 73.3
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 1.2e-42 176.4 103 74.8
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 4.4e-42 174.5 103 72.8
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 1.7e-41 172.6 103 70.9
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 8.3e-41 170.2 103 72.8
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 3.1e-40 168.3 103 69.9
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 3.1e-40 168.3 94 76.6
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 3.1e-40 168.3 103 69.9
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 7.0e-40 167.2 103 70.9
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 7.0e-40 167.2 103 70.9
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 7.0e-40 167.2 94 78.7
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 1.6e-39 166.0 103 69.9
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.6e-39 166.0 103 69.9
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 3.5e-39 164.9 103 68.9
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 4.5e-39 164.5 103 68.9
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 7.8e-39 163.7 103 68.9
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 3.8e-38 161.4 100 69.0
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 5.0e-38 161.0 101 68.3
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.1e-37 159.8 106 65.1
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 1.5e-37 159.5 103 67.0
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 1.5e-37 159.5 103 65.0
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 1.5e-37 159.5 101 65.3
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 2.5e-37 158.7 102 69.6
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 2.5e-37 158.7 103 65.0
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 3.3e-37 158.3 101 65.3
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 5.6e-37 157.5 94 70.2
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 7.3e-37 157.1 94 69.1
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 7.3e-37 157.1 103 67.0
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 7.3e-37 157.1 101 64.4
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 2.1e-36 155.6 94 69.1
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 2.3e-35 152.1 94 68.1
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 5.2e-35 151.0 101 62.4
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 6.8e-35 150.6 105 61.0
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 2.6e-34 148.7 98 70.4
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 2.6e-34 148.7 98 70.4
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 3.4e-34 148.3 96 63.5
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 3.4e-34 148.3 101 63.4
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 4.4e-34 147.9 102 60.8
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 4.4e-34 147.9 102 60.8
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 7.5e-34 147.1 100 60.0
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 2.2e-33 145.6 88 72.7
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 2.9e-33 145.2 102 64.7
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 3.7e-33 144.8 104 58.7
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 4.9e-33 144.4 100 60.0
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 4.9e-33 144.4 101 62.4
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 6.4e-33 144.1 83 72.3
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 1.8e-32 142.5 100 62.0
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 1.8e-32 142.5 101 58.4
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 3.2e-32 141.7 90 63.3
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 4.1e-32 141.4 69 78.3
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 7.0e-32 140.6 104 57.7
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 7.0e-32 140.6 104 56.7
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 1.2e-31 139.8 104 56.7
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 2.0e-31 139.0 104 56.7
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 2.7e-31 138.7 103 57.3
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 3.5e-31 138.3 92 63.0
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 4.6e-31 137.9 104 55.8
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 5.9e-31 137.5 103 55.3
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 5.0e-30 134.4 91 64.8
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 8.6e-30 133.7 103 57.3
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 1.1e-29 133.3 104 55.8
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 1.1e-29 133.3 104 55.8
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.5e-29 132.9 104 55.8
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 1.9e-29 132.5 100 56.0
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 3.3e-29 131.7 121 53.7
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 4.3e-29 131.3 80 68.8
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 2.1e-28 129.0 109 51.4
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 2.1e-28 129.0 109 51.4
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 2.1e-28 129.0 101 55.4
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 6.2e-28 127.5 83 62.7
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 1.0e-27 126.7 101 53.5
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 1.8e-27 125.9 100 51.0
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 8.9e-27 123.6 81 65.4
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 8.9e-27 123.6 97 54.6
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 1.2e-26 123.2 63 69.8
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 1.5e-26 122.9 100 55.0
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 5.8e-26 120.9 100 56.0
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 9.8e-26 120.2 98 54.1
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.3e-25 119.8 75 62.7
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 1.7e-25 119.4 86 58.1
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 2.2e-25 119.0 93 53.8
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 1.1e-24 116.7 91 49.5
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 1.1e-24 116.7 100 54.0
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 3.2e-24 115.2 99 51.5
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 9.2e-24 113.6 100 52.0
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 3.5e-23 111.7 91 52.7
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 7.8e-23 110.5 100 44.0
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 1.5e-21 106.3 89 51.7
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 1.9e-21 105.9 93 47.3
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 5.6e-21 104.4 63 58.7
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 9.5e-21 103.6 91 52.7
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 1.2e-20 103.2 101 46.5
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 8.1e-20 100.5 64 62.5
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 1.8e-19 99.4 97 45.4
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 4.0e-19 98.2 89 53.9
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 4.4e-18 94.7 88 53.4
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 1.7e-17 92.8 115 40.0
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 5.4e-16 87.8 51 62.7
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 1.6e-15 86.3 119 37.8
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 2.1e-15 85.9 44 72.7
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 2.6e-10 68.9 92 35.9
QL03p062338 Quercus lobata HOM05D007077 ORTHO05D008853 3.4e-10 68.6 72 55.6


User provided reference genes

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