Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 6.1e-95 350.9 189 100.0
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 3.5e-74 282.0 195 80.5
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 7.8e-74 280.8 195 80.5
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 5.6e-64 248.1 202 69.8
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 2.8e-63 245.7 197 72.6
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 3.4e-61 238.8 199 69.8
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 9.8e-61 237.3 198 69.7
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 6.4e-60 234.6 202 66.8
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 1.4e-59 233.4 198 68.2
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 1.9e-59 233.0 199 68.3
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 1.9e-59 233.0 198 67.2
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 3.5e-58 228.8 198 65.2
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 4.6e-58 228.4 192 67.7
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 5.1e-57 224.9 194 67.5
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 8.6e-57 224.2 201 65.7
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 1.1e-56 223.8 200 67.0
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.1e-56 223.8 200 67.0
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 1.1e-56 223.8 194 67.0
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 2.5e-56 222.6 194 66.0
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 2.5e-56 222.6 199 64.8
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 2.5e-56 222.6 195 66.2
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 3.3e-56 222.2 194 67.5
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 3.3e-56 222.2 215 61.9
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 1.2e-55 220.3 201 66.7
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 3.6e-55 218.8 205 62.4
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 4.7e-55 218.4 197 67.5
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 4.7e-55 218.4 204 63.2
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 1.8e-54 216.5 205 62.9
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 8.9e-54 214.2 194 66.0
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 1.2e-53 213.8 193 64.2
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.5e-53 213.4 196 64.3
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 9.9e-53 210.7 196 64.3
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 9.9e-53 210.7 187 65.2
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 9.9e-53 210.7 187 65.2
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 9.9e-53 210.7 187 65.2
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 1.3e-52 210.3 194 63.9
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 1.7e-52 209.9 200 64.5
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.9e-52 209.1 194 61.9
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 3.7e-52 208.8 220 57.7
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 4.9e-52 208.4 196 61.7
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 6.4e-52 208.0 192 64.1
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 8.3e-52 207.6 206 60.2
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 1.1e-51 207.2 191 62.8
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 1.9e-51 206.5 191 62.8
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 4.1e-51 205.3 195 62.1
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 7.1e-51 204.5 202 60.9
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 1.2e-50 203.8 191 61.8
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.6e-50 203.4 194 59.3
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 2.1e-50 203.0 200 61.0
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 2.7e-50 202.6 195 62.1
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 2.7e-50 202.6 192 62.0
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 4.6e-50 201.8 194 59.3
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 8.6e-49 197.6 191 60.7
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 1.1e-48 197.2 180 64.4
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 1.1e-48 197.2 180 64.4
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 1.1e-48 197.2 194 60.8
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 1.9e-48 196.4 174 66.1
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 2.5e-48 196.1 194 58.2
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 3.3e-48 195.7 180 63.9
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 3.3e-48 195.7 174 66.1
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 4.3e-48 195.3 194 57.2
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.3e-48 195.3 200 59.5
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 4.3e-48 195.3 185 62.7
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.6e-48 194.9 200 59.0
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 5.6e-48 194.9 194 57.7
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 9.5e-48 194.1 200 59.0
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 9.5e-48 194.1 200 59.0
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.2e-47 193.7 201 58.7
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.6e-47 193.4 173 65.3
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 4.7e-47 191.8 204 56.4
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 6.2e-47 191.4 174 63.2
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 8.1e-47 191.0 187 61.0
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 8.1e-47 191.0 177 62.1
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 2.4e-46 189.5 195 59.0
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 3.1e-46 189.1 174 62.6
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 3.1e-46 189.1 185 60.5
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 5.2e-46 188.3 195 58.5
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 6.8e-46 188.0 187 59.9
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 8.9e-46 187.6 251 48.2
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 1.5e-45 186.8 196 57.7
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 1.5e-45 186.8 190 60.0
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 2.0e-45 186.4 204 55.9
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.4e-45 185.7 174 63.2
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 5.8e-45 184.9 204 55.4
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 7.6e-45 184.5 177 59.9
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 9.9e-45 184.1 190 59.5
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 2.9e-44 182.6 195 55.9
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 4.9e-44 181.8 214 54.2
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 4.9e-44 181.8 172 60.5
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 2.4e-43 179.5 189 57.1
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 2.4e-43 179.5 172 61.0
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 7.1e-43 177.9 174 59.2
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.1e-42 176.4 147 68.7
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 3.5e-42 175.6 180 57.8
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 6.0e-42 174.9 193 54.9
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 1.0e-41 174.1 174 57.5
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 2.3e-41 172.9 214 51.9
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 1.1e-40 170.6 147 66.0
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.5e-40 170.2 190 54.2
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 3.3e-40 169.1 147 60.5
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 7.3e-40 167.9 167 59.3
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 1.2e-39 167.2 155 62.6
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 3.6e-39 165.6 134 67.2
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 3.6e-39 165.6 167 58.7
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 8.1e-39 164.5 154 64.3
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 2.2e-36 156.4 151 57.6
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 1.4e-35 153.7 174 56.3
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 6.6e-33 144.8 133 63.2
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 1.3e-31 140.6 132 62.1
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 1.3e-31 140.6 140 60.7
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.8e-31 139.4 152 54.6
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 3.6e-31 139.0 108 70.4
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 9.0e-30 134.4 108 67.6
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 2.0e-29 133.3 148 56.1
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 1.3e-28 130.6 140 60.0
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 7.9e-26 121.3 144 47.9
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 5.6e-24 115.2 145 44.8
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 2.1e-23 113.2 179 39.7
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 4.0e-22 109.0 154 45.5
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 1.2e-21 107.5 103 55.3
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 4.3e-16 89.0 106 45.3
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 1.1e-14 84.3 75 61.3
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 6.9e-14 81.6 128 39.8
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.2e-10 70.9 82 52.4
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 2.8e-07 59.7 62 58.1


User provided reference genes

Program Settings