Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 0.0e+00 2275.7 1132 100.0
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 0.0e+00 1894.4 1133 83.8
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 0.0e+00 1829.3 1136 81.5
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 0.0e+00 1692.9 1131 76.5
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 0.0e+00 1687.2 1133 75.3
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 0.0e+00 1661.7 1132 74.8
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 0.0e+00 1659.8 1131 74.6
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 0.0e+00 1656.0 1143 74.3
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 0.0e+00 1570.8 1134 71.7
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 0.0e+00 1542.7 1129 70.7
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 0.0e+00 1508.0 1090 74.8
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 0.0e+00 1200.3 1138 55.0
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 0.0e+00 1186.8 1138 54.8
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 0.0e+00 1140.9 1224 51.2
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 0.0e+00 1082.0 1136 51.3
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 5.9e-310 1067.8 1135 50.7
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 5.0e-309 1064.7 1142 51.0
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 3.9e-306 1055.0 1148 51.0
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 7.4e-305 1050.8 1147 50.6
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 3.4e-302 1042.0 1141 49.3
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 1.3e-301 1040.0 1141 49.3
Psat4g039120 Pisum sativum HOM05D007419 ORTHO05D009327 1.3e-301 1040.0 702 74.6
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 3.8e-301 1038.5 1141 49.6
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 2.7e-299 1032.3 1138 48.9
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 2.3e-298 1029.2 1139 50.0
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 8.8e-298 1027.3 1137 49.6
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 2.6e-297 1025.8 1124 49.2
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 5.7e-297 1024.6 1141 48.6
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 1.1e-287 993.8 1144 49.0
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 1.8e-279 966.5 1133 47.0
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 1.6e-275 953.4 1169 46.3
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 3.8e-269 932.2 1192 46.1
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 2.3e-266 922.9 1029 48.4
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 3.0e-266 922.5 1138 45.9
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 6.8e-266 921.4 1140 46.8
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 1.7e-261 906.7 977 50.3
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 2.6e-257 892.9 1134 44.3
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 6.0e-254 881.7 1230 43.3
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 7.3e-244 848.2 1159 43.6
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 2.0e-241 840.1 1149 43.6
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 4.4e-241 839.0 1097 44.4
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 1.3e-237 827.4 1137 44.0
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 3.1e-234 816.2 1135 44.0
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 9.9e-233 811.2 1148 42.1
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 4.9e-232 808.9 1118 40.9
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 4.9e-232 808.9 1136 43.6
GSVIVG01015591001 Vitis vinifera HOM05D007419 ORTHO05D009327 1.9e-231 807.0 863 49.6
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 2.4e-231 806.6 1145 41.4
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 1.6e-230 803.9 1136 43.4
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 3.3e-228 796.2 1136 42.5
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 1.3e-224 784.3 1124 41.5
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 2.7e-222 776.5 1144 42.6
Manes.06G047100 Manihot esculenta HOM05D007419 ORTHO05D009327 3.5e-222 776.2 810 50.9
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 4.6e-222 775.8 1124 41.2
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 1.0e-221 774.6 1134 41.5
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 1.8e-218 763.8 1176 39.4
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 4.0e-218 762.7 1141 40.8
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 2.3e-213 746.9 948 44.6
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 5.6e-212 742.3 1016 42.3
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 2.1e-203 713.8 1136 40.1
TWI34G0413 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 5.8e-201 705.7 943 42.6
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 6.3e-195 685.6 1011 42.0
Actinidia21952 Actinidia chinensis HOM05D007419 ORTHO05D009327 1.0e-192 678.3 836 45.5
Sc08g0006270 Simmondsia chinensis HOM05D007419 ORTHO05D009327 2.2e-192 677.2 872 43.0
Eucgr.C01385 Eucalyptus grandis HOM05D007419 ORTHO05D009327 1.0e-181 641.7 844 44.0
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 6.3e-179 632.5 1137 37.5
Gohir.D13G206200 Gossypium hirsutum HOM05D007419 ORTHO05D009327 5.9e-177 625.9 691 48.8
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 5.0e-176 622.9 1138 37.1
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 1.2e-169 601.7 866 41.2
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 1.5e-167 594.7 1039 36.2
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 9.1e-154 548.9 1115 33.5
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 4.2e-151 540.0 1202 31.7
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 1.3e-136 491.9 328 75.6
Os06g0173000 Oryza sativa ssp. japonica HOM05D007419 ORTHO05D009327 7.5e-132 476.1 1160 30.6
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 2.7e-129 467.6 871 35.6
Hund26535 Selenicereus undatus HOM05D007419 ORTHO05D009327 3.8e-107 394.0 404 52.7
MD15G1167400 Malus domestica HOM05D007419 ORTHO05D009327 1.4e-98 365.5 298 62.1
Zm00001eb375320 Zea mays HOM05D007419 ORTHO05D009327 1.9e-87 328.6 840 29.0
AUR62011176 Chenopodium quinoa HOM05D007419 ORTHO05D009327 9.0e-85 319.7 311 54.3
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 9.4e-74 283.1 255 60.4
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 2.2e-70 271.9 274 53.3
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 3.2e-66 258.1 430 37.7
CAN.G778.5 Capsicum annuum HOM05D007419 ORTHO05D009327 4.7e-65 254.2 203 59.1
QL09p046570 Quercus lobata HOM05D007419 ORTHO05D009327 3.3e-63 248.1 422 37.0
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 1.7e-62 245.7 214 62.6
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 2.2e-59 235.3 230 58.3
SMO340G0190 Selaginella moellendorffii HOM05D007419 ORTHO05D009327 5.0e-59 234.2 1142 24.8
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 5.7e-55 220.7 264 50.8
SEGI_04675 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 2.3e-48 198.7 422 31.3
Oeu012224.2 Olea europaea HOM05D007419 ORTHO05D009327 2.7e-44 185.3 434 32.5
QL09p046488 Quercus lobata HOM05D007419 ORTHO05D009327 4.7e-41 174.5 155 58.1
QL09p046563 Quercus lobata HOM05D007419 ORTHO05D009327 4.7e-41 174.5 155 58.1
CBR_g6680 Chara braunii HOM05D007419 ORTHO05D009327 2.6e-39 168.7 993 22.4
Medtr7g110110 Medicago truncatula HOM05D007419 ORTHO05D009327 7.5e-39 167.2 125 68.0
MSTRG.26436 Avicennia marina HOM05D007419 ORTHO05D009327 4.0e-32 144.8 146 50.7
EL10Ac8g18720 Beta vulgaris HOM05D007419 ORTHO05D009327 4.4e-31 141.4 150 50.7
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 3.7e-30 138.3 157 47.8
Oeu038257.1 Olea europaea HOM05D007419 ORTHO05D009327 4.1e-29 134.8 218 41.3
Dinv10908 Davidia involucrata HOM05D007419 ORTHO05D009327 3.1e-24 118.6 120 58.3
MD08G1122800 Malus domestica HOM05D007419 ORTHO05D009327 3.1e-24 118.6 85 64.7
SEGI_28656 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 9.8e-15 87.0 273 21.6
Nn8g39545 Nelumbo nucifera HOM05D007419 ORTHO05D009327 3.3e-10 72.0 85 44.7


User provided reference genes

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