Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G110701 Glycine max HOM05D003895 ORTHO05D004723 3.3e-26 120.9 61 100.0
Aa31LG2G1550 Aethionema arabicum HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
AL1G63080 Arabidopsis lyrata HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
AT1G55090 Arabidopsis thaliana HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
MSTRG.13762 Avicennia marina HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
BcaB04g17002 Brassica carinata HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
BcaC01g01456 Brassica carinata HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
A06p00400 Brassica napus HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
A08p01020 Brassica napus HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
C03p92220 Brassica napus HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
BolC3t21537H Brassica oleracea HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
BraA06t23255Z Brassica rapa HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
BraA08t32154Z Brassica rapa HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
CANSAT54G0301 Cannabis sativa HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
Carub.0001s4358 Capsella rubella HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
CARHR044680 Cardamine hirsuta HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
Cc08_g16460 Coffea canephora HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
ECA240G1010 Erigeron canadensis HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
Migut.E00651 Erythranthe guttata HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
Thhalv10011266m.g Eutrema salsugineum HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
Glyma.05G219500 Glycine max HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
Glyma.08G025800 Glycine max HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
HanXRQChr03g0083671 Helianthus annuus HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
Lj4g0018300 Lotus japonicus HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
Lalb_Chr16g0390761 Lupinus albus HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
Phvul.002G328900 Phaseolus vulgaris HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
Potri.001G087400 Populus trichocarpa HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
Potri.003G143700 Populus trichocarpa HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
PGR042G2513 Punica granatum HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
Sp1g40750 Schrenkiella parvula HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
Sed0021355 Sechium edule HOM05D003895 ORTHO05D004723 4.8e-09 63.9 34 91.2
Lsat_1_v5_gn_6_83601 Lactuca sativa HOM05D003895 ORTHO05D004723 8.2e-09 63.2 34 88.2
arahy.Tifrunner.gnm1.ann1.68E5M7 Arachis hypogaea HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
arahy.Tifrunner.gnm1.ann1.M62N24 Arachis hypogaea HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
CiPaw.11G115900 Carya illinoinensis HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
Ca_17453_v3 Cicer arietinum L. HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
Ciclev10019024m.g Citrus clementina HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
Haze_09105 Corylus avellana HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
Haze_09120 Corylus avellana HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
DCAR_006502 Daucus carota HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
HanXRQChr06g0166321 Helianthus annuus HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
Lj4g0016220 Lotus japonicus HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
Medtr8g099885 Medicago truncatula HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
Nitab4.5_0002367g0210 Nicotiana tabacum HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
Nitab4.5_0002439g0120 Nicotiana tabacum HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
Oeu009988.1 Olea europaea HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
Peaxi162Scf00074g00431 Petunia axillaris HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
Rhsim07G0079800 Rhododendron simsii HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
Sabra03G0104100 Salix brachista HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
SalBow2G2362 Salvia bowleyana HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
Solyc08g082830.3 Solanum lycopersicum HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
Sopen08g031060 Solanum pennellii HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
PGSC0003DMG400012128 Solanum tuberosum HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
SGA_v2.0_scaffold295G47513 Striga asiatica HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
THA.LOC104823616 Tarenaya hassleriana HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
TPR.G18245 Trifolium pratense HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
TPR.G3395 Trifolium pratense HOM05D003895 ORTHO05D004723 1.1e-08 62.8 34 88.2
MELO3C005756.2 Cucumis melo HOM05D003895 ORTHO05D004723 1.4e-08 62.4 34 88.2
CsaV3_5G001970 Cucumis sativus L. HOM05D003895 ORTHO05D004723 1.4e-08 62.4 34 88.2
PSO017G1958 Papaver somniferum HOM05D003895 ORTHO05D004723 1.4e-08 62.4 34 88.2
PSO170G0459 Papaver somniferum HOM05D003895 ORTHO05D004723 1.4e-08 62.4 34 88.2
Sabra01G0063700 Salix brachista HOM05D003895 ORTHO05D004723 1.4e-08 62.4 34 88.2
VMungo0251G3777 Vigna mungo HOM05D003895 ORTHO05D004723 1.4e-08 62.4 34 88.2
CSS0003453 Camellia sinensis var. sinensis HOM05D003895 ORTHO05D004723 1.8e-08 62.0 34 85.3
CSS0024936 Camellia sinensis var. sinensis HOM05D003895 ORTHO05D004723 1.8e-08 62.0 34 85.3
Oeu059576.4 Olea europaea HOM05D003895 ORTHO05D004723 1.8e-08 62.0 34 85.3
Actinidia04389 Actinidia chinensis HOM05D003895 ORTHO05D004723 2.4e-08 61.6 34 85.3
Cpa.g.sc15.11 Carica papaya HOM05D003895 ORTHO05D004723 3.1e-08 61.2 34 85.3
ClCG01G001820 Citrullus lanatus HOM05D003895 ORTHO05D004723 3.1e-08 61.2 34 85.3
FvH4_5g11490 Fragaria vesca HOM05D003895 ORTHO05D004723 3.1e-08 61.2 34 85.3
FAN04G2440 Fragaria x ananassa HOM05D003895 ORTHO05D004723 3.1e-08 61.2 34 85.3
FAN08G0955 Fragaria x ananassa HOM05D003895 ORTHO05D004723 3.1e-08 61.2 34 85.3
FAN18G2619 Fragaria x ananassa HOM05D003895 ORTHO05D004723 3.1e-08 61.2 34 85.3
FAN18G3428 Fragaria x ananassa HOM05D003895 ORTHO05D004723 3.1e-08 61.2 34 85.3
RcHm_v2.0_Chr7g0186311 Rosa chinensis HOM05D003895 ORTHO05D004723 3.1e-08 61.2 34 85.3
BcaB07g33238 Brassica carinata HOM05D003895 ORTHO05D004723 4.1e-08 60.8 34 88.2
BcaC08g43605 Brassica carinata HOM05D003895 ORTHO05D004723 4.1e-08 60.8 34 88.2
C06p10070 Brassica napus HOM05D003895 ORTHO05D004723 4.1e-08 60.8 34 88.2
BolC6t36080H Brassica oleracea HOM05D003895 ORTHO05D004723 4.1e-08 60.8 34 88.2
Cc05_g02370 Coffea canephora HOM05D003895 ORTHO05D004723 4.1e-08 60.8 34 88.2
Aqoxy2G01051 Aquilegia oxysepala HOM05D003895 ORTHO05D004723 5.3e-08 60.5 34 82.4
Aqoxy456s001 Aquilegia oxysepala HOM05D003895 ORTHO05D004723 5.3e-08 60.5 34 82.4
CAN.G567.61 Capsicum annuum HOM05D003895 ORTHO05D004723 5.3e-08 60.5 34 85.3
Lj2C160T5 Lonicera japonica HOM05D003895 ORTHO05D004723 5.3e-08 60.5 34 85.3
QL02p029300 Quercus lobata HOM05D003895 ORTHO05D004723 5.3e-08 60.5 34 85.3
TPR.G3413 Trifolium pratense HOM05D003895 ORTHO05D004723 5.3e-08 60.5 34 82.4
Psat7g023520 Pisum sativum HOM05D003895 ORTHO05D004723 6.9e-08 60.1 34 82.4
Cfa011961 Carpinus fangiana HOM05D003895 ORTHO05D004723 9.1e-08 59.7 34 85.3
Ciclev10024991m.g Citrus clementina HOM05D003895 ORTHO05D004723 9.1e-08 59.7 34 85.3
Eucgr.E01025 Eucalyptus grandis HOM05D003895 ORTHO05D004723 9.1e-08 59.7 34 85.3
TWI60G1173 Tripterygium wilfordii HOM05D003895 ORTHO05D004723 9.1e-08 59.7 34 85.3
Psat7g023560 Pisum sativum HOM05D003895 ORTHO05D004723 1.2e-07 59.3 34 82.4
MD06G1113100 Malus domestica HOM05D003895 ORTHO05D004723 1.5e-07 58.9 34 82.4
MD14G1134200 Malus domestica HOM05D003895 ORTHO05D004723 1.5e-07 58.9 34 82.4
Prupe.5G126000 Prunus persica HOM05D003895 ORTHO05D004723 1.5e-07 58.9 34 82.4
Sc01g0010470 Simmondsia chinensis HOM05D003895 ORTHO05D004723 1.5e-07 58.9 34 82.4
TAR629G1064 Trochodendron aralioides HOM05D003895 ORTHO05D004723 1.5e-07 58.9 34 82.4
vmacro10679 Vaccinium macrocarpon HOM05D003895 ORTHO05D004723 1.5e-07 58.9 34 82.4
vmacro13870 Vaccinium macrocarpon HOM05D003895 ORTHO05D004723 1.5e-07 58.9 34 82.4
vmacro22441 Vaccinium macrocarpon HOM05D003895 ORTHO05D004723 1.5e-07 58.9 34 82.4
Dinv34692 Davidia involucrata HOM05D003895 ORTHO05D004723 2.6e-07 58.2 34 79.4
Manes.02G005900 Manihot esculenta HOM05D003895 ORTHO05D004723 2.6e-07 58.2 34 82.4
Nn3g20296 Nelumbo nucifera HOM05D003895 ORTHO05D004723 2.6e-07 58.2 34 82.4
Os07g0167100 Oryza sativa ssp. japonica HOM05D003895 ORTHO05D004723 2.6e-07 58.2 34 79.4
Zm00001eb094700 Zea mays HOM05D003895 ORTHO05D004723 2.6e-07 58.2 34 79.4
Ah.12g052950 Amaranthus hybridus HOM05D003895 ORTHO05D004723 3.4e-07 57.8 34 82.4
AUR62007020 Chenopodium quinoa HOM05D003895 ORTHO05D004723 3.4e-07 57.8 34 82.4
AUR62015016 Chenopodium quinoa HOM05D003895 ORTHO05D004723 3.4e-07 57.8 34 82.4
AUR62029097 Chenopodium quinoa HOM05D003895 ORTHO05D004723 3.4e-07 57.8 34 82.4
ECA246G1101 Erigeron canadensis HOM05D003895 ORTHO05D004723 3.4e-07 57.8 33 84.8
COL.COLO4_10753 Corchorus olitorius HOM05D003895 ORTHO05D004723 4.5e-07 57.4 34 82.4
Gohir.A08G111660 Gossypium hirsutum HOM05D003895 ORTHO05D004723 4.5e-07 57.4 34 82.4
Gohir.D08G124600 Gossypium hirsutum HOM05D003895 ORTHO05D004723 4.5e-07 57.4 34 82.4
Gorai.004G131300 Gossypium raimondii HOM05D003895 ORTHO05D004723 4.5e-07 57.4 34 82.4
Thecc.03G303200 Theobroma cacao HOM05D003895 ORTHO05D004723 4.5e-07 57.4 34 82.4
Duzib068G0704 Durio zibethinus HOM05D003895 ORTHO05D004723 5.9e-07 57.0 34 82.4
Hma1.2p1_1835F.1_g304665 Hydrangea macrophylla HOM05D003895 ORTHO05D004723 5.9e-07 57.0 34 82.4
EL10Ac5g12963 Beta vulgaris HOM05D003895 ORTHO05D004723 7.7e-07 56.6 34 79.4
HPP92_025338 Vanilla planifolia HOM05D003895 ORTHO05D004723 7.7e-07 56.6 34 79.4
ATR1098G082 Amborella trichopoda HOM05D003895 ORTHO05D004723 1.0e-06 56.2 34 79.4
unitig_21.g20891 Utricularia gibba HOM05D003895 ORTHO05D004723 1.0e-06 56.2 34 79.4
GSVIVG01019608001 Vitis vinifera HOM05D003895 ORTHO05D004723 1.7e-06 55.5 34 76.5
Pp3c17_21910 Physcomitrium patens HOM05D003895 ORTHO05D004723 2.2e-06 55.1 34 76.5
AagrBONN_evm.TU.Sc2ySwM_228.4970 Anthoceros agrestis HOM05D003895 ORTHO05D004723 3.8e-06 54.3 34 76.5
Psat7g023400 Pisum sativum HOM05D003895 ORTHO05D004723 5.0e-06 53.9 33 75.8
Hund14202 Selenicereus undatus HOM05D003895 ORTHO05D004723 5.0e-06 53.9 34 73.5


User provided reference genes

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