Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G106100 Glycine max HOM05D007673 ORTHO05D009278 6.0e-71 270.8 142 100.0
Glyma.13G165000 Glycine max HOM05D007673 ORTHO05D009278 2.3e-62 242.3 142 90.1
Phvul.003G173600 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 5.5e-48 194.5 143 74.1
VMungo1215G2163 Vigna mungo HOM05D007673 ORTHO05D009278 1.1e-45 186.8 142 73.2
Medtr4g116360 Medicago truncatula HOM05D007673 ORTHO05D009278 1.8e-35 152.9 151 61.6
Lalb_Chr07g0179441 Lupinus albus HOM05D007673 ORTHO05D009278 1.3e-33 146.7 156 57.1
Lalb_Chr13g0301271 Lupinus albus HOM05D007673 ORTHO05D009278 1.2e-31 140.2 159 58.5
TPR.G15789 Trifolium pratense HOM05D007673 ORTHO05D009278 1.0e-25 120.6 157 54.8
Lj6g0015094 Lotus japonicus HOM05D007673 ORTHO05D009278 1.7e-25 119.8 142 50.0
Phvul.009G210216 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 1.1e-24 117.1 152 48.0
VMungo1309G0908 Vigna mungo HOM05D007673 ORTHO05D009278 1.4e-22 110.2 148 50.0
Medtr2g450420 Medicago truncatula HOM05D007673 ORTHO05D009278 1.2e-21 107.1 156 47.4
Psat0s503g0080 Pisum sativum HOM05D007673 ORTHO05D009278 1.2e-21 107.1 144 52.1
Psat0s5432g0040 Pisum sativum HOM05D007673 ORTHO05D009278 1.2e-21 107.1 144 52.1
Psat4g035400 Pisum sativum HOM05D007673 ORTHO05D009278 3.7e-20 102.1 143 47.6
arahy.Tifrunner.gnm1.ann1.5L22XG Arachis hypogaea HOM05D007673 ORTHO05D009278 3.1e-19 99.0 159 44.7
Sabra06G0043300 Salix brachista HOM05D007673 ORTHO05D009278 1.0e-17 94.0 160 43.1
Dinv41432 Davidia involucrata HOM05D007673 ORTHO05D009278 3.8e-17 92.0 157 42.7
TAR383G0338 Trochodendron aralioides HOM05D007673 ORTHO05D009278 6.5e-17 91.3 157 40.8
arahy.Tifrunner.gnm1.ann1.L2N39S Arachis hypogaea HOM05D007673 ORTHO05D009278 1.5e-16 90.1 159 42.1
Potri.006G060000 Populus trichocarpa HOM05D007673 ORTHO05D009278 5.5e-16 88.2 161 42.2
COL.COLO4_24126 Corchorus olitorius HOM05D007673 ORTHO05D009278 9.5e-16 87.4 160 43.1
TAR625G1436 Trochodendron aralioides HOM05D007673 ORTHO05D009278 9.5e-16 87.4 156 39.7
Dinv43178 Davidia involucrata HOM05D007673 ORTHO05D009278 2.8e-15 85.9 142 40.8
MBI14_g03622_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 6.1e-15 84.7 153 38.6
CiPaw.15G183400 Carya illinoinensis HOM05D007673 ORTHO05D009278 8.0e-15 84.3 166 38.0
Prupe.7G256100 Prunus persica HOM05D007673 ORTHO05D009278 2.3e-14 82.8 172 39.0
Potri.018G115601 Populus trichocarpa HOM05D007673 ORTHO05D009278 2.0e-13 79.7 161 40.4
Thecc.09G139900 Theobroma cacao HOM05D007673 ORTHO05D009278 4.4e-13 78.6 159 39.6
FAN28G1648 Fragaria x ananassa HOM05D022859 ORTHO05D009278 5.7e-13 78.2 146 38.4
CiPaw.16G118400 Carya illinoinensis HOM05D007673 ORTHO05D009278 7.5e-13 77.8 156 37.2
FvH4_1g01840 Fragaria vesca HOM05D022859 ORTHO05D009278 9.8e-13 77.4 146 37.7
Manes.06G043400 Manihot esculenta HOM05D007673 ORTHO05D009278 1.3e-12 77.0 160 40.6
Nn2g12220 Nelumbo nucifera HOM05D007673 ORTHO05D009278 1.7e-12 76.6 161 37.3
QL02p091069 Quercus lobata HOM05D007673 ORTHO05D009278 4.9e-12 75.1 160 37.5
TWI32G1294 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 1.1e-11 73.9 148 39.9
CSS0039366 Camellia sinensis var. sinensis HOM05D007673 ORTHO05D009278 1.4e-11 73.6 161 37.3
Manes.14G120200 Manihot esculenta HOM05D007673 ORTHO05D009278 2.4e-11 72.8 162 39.5
Glyma.09G094100 Glycine max HOM05D012006 ORTHO05D014172 5.4e-11 71.6 73 60.3
MD02G1016300 Malus domestica HOM05D007673 ORTHO05D009278 1.6e-10 70.1 162 37.0
Rhsim01G0051900 Rhododendron simsii HOM05D007673 ORTHO05D009278 2.0e-10 69.7 176 33.5
Nn8g39681 Nelumbo nucifera HOM05D007673 ORTHO05D009278 3.5e-10 68.9 155 31.6
Aqoxy7G03558 Aquilegia oxysepala HOM05D007673 ORTHO05D009278 7.8e-10 67.8 163 38.0
MD15G1160900 Malus domestica HOM05D007673 ORTHO05D009278 7.8e-10 67.8 151 38.4
TWI34G1167 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 7.8e-10 67.8 152 41.4
GSVIVG01012874001 Vitis vinifera HOM05D007673 ORTHO05D009278 2.3e-09 66.2 153 37.9
HanXRQChr09g0243101 Helianthus annuus HOM05D007673 ORTHO05D009278 3.8e-09 65.5 153 35.9
Actinidia04238 Actinidia chinensis HOM05D007673 ORTHO05D009278 1.9e-08 63.2 165 33.9
AUR62041460 Chenopodium quinoa HOM05D022392 ORTHO05D009278 2.5e-08 62.8 177 32.2
Lsat_1_v5_gn_7_45981 Lactuca sativa HOM05D007673 ORTHO05D009278 5.6e-08 61.6 154 37.0
Actinidia21918 Actinidia chinensis HOM05D007673 ORTHO05D009278 1.2e-07 60.5 164 32.9
FAN26G0562 Fragaria x ananassa HOM05D022859 ORTHO05D009278 1.2e-07 60.5 196 31.6
Atru.chr7.275 Acer truncatum HOM05D007673 ORTHO05D009278 2.1e-07 59.7 163 34.4
CsaV3_1G028420 Cucumis sativus L. HOM05D007673 ORTHO05D009278 2.8e-07 59.3 141 39.0
FAN19G1896 Fragaria x ananassa HOM05D022859 ORTHO05D009278 2.8e-07 59.3 177 32.2
Gohir.A05G012100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 3.6e-07 58.9 159 35.2
Gohir.D05G013100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 3.6e-07 58.9 159 35.2
Gorai.009G013100 Gossypium raimondii HOM05D007673 ORTHO05D009278 3.6e-07 58.9 159 35.2
AUR62011243 Chenopodium quinoa HOM05D022392 ORTHO05D009278 4.7e-07 58.5 175 31.4
EL10Ac8g18805 Beta vulgaris HOM05D022392 ORTHO05D009278 1.0e-06 57.4 170 32.4
PSO170G6343 Papaver somniferum HOM05D007673 ORTHO05D009278 1.4e-06 57.0 156 31.4
Lalb_Chr08g0233631 Lupinus albus HOM05D012006 ORTHO05D014172 2.3e-06 56.2 64 53.1
Sc14g0000100 Simmondsia chinensis HOM05D052917 ORTHO05D009278 2.3e-06 56.2 155 32.9
Cc06_g07510 Coffea canephora HOM05D007673 ORTHO05D009278 3.0e-06 55.8 168 32.1
PSO017G0897 Papaver somniferum HOM05D007673 ORTHO05D009278 4.0e-06 55.5 154 31.2
Dinv42922 Davidia involucrata HOM05D012006 ORTHO05D014172 5.2e-06 55.1 70 47.1
ECA240G3592 Erigeron canadensis HOM05D007673 ORTHO05D009278 8.9e-06 54.3 153 30.7
PGSC0003DMG400030693 Solanum tuberosum HOM05D007673 ORTHO05D009278 8.9e-06 54.3 155 27.1


User provided reference genes

Program Settings