Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 9.4e-281 969.5 491 100.0
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 1.9e-257 892.1 494 93.3
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 1.2e-240 836.3 498 87.1
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 2.1e-232 808.9 499 85.2
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 2.5e-204 715.7 504 76.6
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 8.7e-202 707.2 502 74.7
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 2.1e-200 702.6 509 74.7
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 4.5e-198 694.9 502 74.9
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 7.1e-196 687.6 499 75.8
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 1.5e-193 679.9 514 72.2
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 3.7e-192 675.2 503 71.8
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 4.5e-190 668.3 512 70.5
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 2.9e-189 665.6 510 70.4
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 1.2e-187 660.2 508 71.5
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 7.9e-187 657.5 533 67.9
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 3.7e-184 648.7 510 70.6
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 5.3e-183 644.8 516 68.2
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 9.1e-183 644.0 514 68.9
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 9.1e-183 644.0 514 68.5
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.2e-182 643.7 526 67.1
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 5.5e-180 634.8 509 69.0
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 6.1e-179 631.3 497 69.6
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 6.1e-179 631.3 502 69.7
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 1.0e-178 630.6 511 65.9
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 1.4e-178 630.2 522 65.1
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 1.8e-178 629.8 507 68.4
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 5.1e-178 628.2 502 69.5
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 3.3e-177 625.5 502 69.5
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 5.7e-177 624.8 505 69.9
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 7.4e-177 624.4 509 68.2
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.4e-175 620.2 503 69.2
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 2.4e-175 619.4 503 69.4
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.6e-174 615.9 488 70.5
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.0e-173 614.0 503 69.0
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 1.2e-171 607.1 503 69.0
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 1.2e-171 607.1 508 64.8
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 2.0e-169 599.7 497 66.2
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 1.7e-168 596.7 514 66.0
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 4.8e-168 595.1 516 67.1
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 1.8e-167 593.2 507 65.9
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 2.0e-166 589.7 502 64.3
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 2.6e-166 589.3 519 64.0
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 3.5e-166 589.0 506 65.6
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 3.2e-164 582.4 508 65.4
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 2.3e-162 576.2 507 64.7
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 7.5e-161 571.2 502 63.9
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 1.7e-160 570.1 509 64.4
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 3.7e-160 568.9 496 63.1
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 1.4e-159 567.0 501 63.3
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 1.8e-159 566.6 499 63.7
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 5.0e-157 558.5 511 62.2
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 3.2e-156 555.8 523 61.6
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 1.2e-155 553.9 495 62.6
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 1.2e-155 553.9 507 60.9
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 1.4e-154 550.4 488 63.3
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 2.2e-152 543.1 495 62.0
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 2.8e-152 542.7 497 61.8
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 3.7e-152 542.3 509 61.5
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 4.8e-152 542.0 507 61.3
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.0e-149 534.3 503 62.8
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 1.7e-149 533.5 491 61.9
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 1.1e-148 530.8 575 54.1
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 2.5e-148 529.6 514 60.3
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 7.8e-142 508.1 395 71.4
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 6.6e-141 505.0 489 57.5
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 2.8e-139 499.6 476 58.8
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 8.0e-139 498.0 484 58.7
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 1.0e-138 497.7 467 59.7
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 1.2e-137 494.2 511 56.6
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 1.2e-137 494.2 511 56.6
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 9.8e-137 491.1 506 56.1
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 4.9e-136 488.8 496 58.3
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 7.8e-134 481.5 506 56.3
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 7.8e-134 481.5 429 60.8
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 2.3e-133 479.9 516 54.7
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.8e-130 470.3 514 52.9
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 2.3e-130 469.9 488 55.5
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 2.6e-129 466.5 490 55.3
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 6.6e-125 451.8 505 53.1
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 1.2e-121 441.0 498 51.8
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 7.6e-121 438.3 503 52.1
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 6.4e-120 435.3 511 53.0
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 8.3e-120 434.9 466 55.2
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 1.4e-119 434.1 419 62.3
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 3.2e-119 433.0 482 53.7
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 9.6e-116 421.4 471 52.7
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 1.3e-112 411.0 343 65.9
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 2.2e-112 410.2 493 52.1
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 2.4e-111 406.8 447 54.8
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 1.5e-108 397.5 484 49.4
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 4.3e-108 396.0 500 47.4
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 7.9e-102 375.2 505 48.7
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.9e-92 344.0 501 46.9
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 4.3e-92 342.8 505 45.5
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 9.6e-92 341.7 323 60.7
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 2.1e-91 340.5 497 45.1
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 1.2e-89 334.7 518 43.1
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 2.0e-89 334.0 301 61.8
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 4.5e-81 306.2 520 41.7
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 5.8e-81 305.8 552 39.5
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 5.8e-81 305.8 526 40.3
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 9.3e-79 298.5 514 40.1
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 3.9e-77 293.1 300 56.3
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 1.4e-71 274.6 424 42.5
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 3.7e-67 260.0 215 64.2
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.2e-64 250.8 222 62.2
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 2.4e-58 230.7 371 46.1
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 5.3e-58 229.6 517 34.0
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 7.7e-49 199.1 582 31.1
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 5.9e-41 172.9 520 30.8
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 1.2e-38 165.2 368 35.9
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 5.2e-37 159.8 141 61.7
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 1.2e-28 132.1 89 73.0
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 7.3e-15 86.3 62 67.7
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 1.3e-11 75.5 66 59.1
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 1.1e-10 72.4 157 36.9
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.2e-09 68.9 314 29.3
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 5.6e-07 60.1 52 57.7


User provided reference genes

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