Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G094600 Glycine max HOM05D013104 ORTHO05D010857 5.9e-68 260.8 134 100.0
Glyma.05G032100 Glycine max HOM05D013104 ORTHO05D010857 5.7e-63 244.2 134 94.8
Phvul.003G195600 Phaseolus vulgaris HOM05D013104 ORTHO05D010857 1.2e-52 209.9 132 84.1
VMungo1215G2054 Vigna mungo HOM05D013104 ORTHO05D010857 5.0e-43 177.9 118 82.2
Lj4g0014795 Lotus japonicus HOM05D013104 ORTHO05D010857 2.5e-42 175.6 139 71.2
Psat4g054920 Pisum sativum HOM05D013104 ORTHO05D010857 1.1e-37 160.2 140 65.0
Medtr4g107270 Medicago truncatula HOM05D013104 ORTHO05D010857 3.2e-37 158.7 136 67.6
TPR.G38456 Trifolium pratense HOM05D013104 ORTHO05D010857 2.7e-36 155.6 143 67.1
Lalb_Chr12g0201261 Lupinus albus HOM05D013104 ORTHO05D010857 2.0e-28 129.4 140 56.4
arahy.Tifrunner.gnm1.ann1.ABZM2I Arachis hypogaea HOM05D013104 ORTHO05D010857 1.5e-26 123.2 155 54.8
Lalb_Chr07g0182451 Lupinus albus HOM05D013104 ORTHO05D010857 5.6e-26 121.3 139 54.7
arahy.Tifrunner.gnm1.ann1.984SQ9 Arachis hypogaea HOM05D013104 ORTHO05D010857 8.3e-22 107.5 141 51.1
CSS0015959 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 2.5e-10 69.3 128 35.9
Manes.14G072000 Manihot esculenta HOM05D009197 ORTHO05D010857 4.3e-10 68.6 130 38.5
Actinidia04946 Actinidia chinensis HOM05D004313 ORTHO05D005036 1.2e-09 67.0 132 37.1
Potri.012G073800 Populus trichocarpa HOM05D009197 ORTHO05D010857 1.4e-08 63.5 131 38.9
Potri.015G068800 Populus trichocarpa HOM05D009197 ORTHO05D010857 2.4e-08 62.8 124 34.7
Sopen06g027530 Solanum pennellii HOM05D009197 ORTHO05D010857 2.4e-08 62.8 125 39.2
COL.COLO4_07631 Corchorus olitorius HOM05D009197 ORTHO05D010857 3.1e-08 62.4 130 33.8
Gorai.007G034100 Gossypium raimondii HOM05D009197 ORTHO05D010857 3.1e-08 62.4 131 35.1
Nitab4.5_0000758g0060 Nicotiana tabacum HOM05D009197 ORTHO05D010857 4.0e-08 62.0 125 37.6
Solyc06g071220.1 Solanum lycopersicum HOM05D009197 ORTHO05D010857 4.0e-08 62.0 125 39.2
Haze_07415 Corylus avellana HOM05D000207 ORTHO05D002370 8.9e-08 60.8 124 35.5
MELO3C002227.2 Cucumis melo HOM05D022550 ORTHO05D025091 8.9e-08 60.8 145 36.6
Gohir.D11G031200 Gossypium hirsutum HOM05D009197 ORTHO05D010857 8.9e-08 60.8 131 35.1
Cfa019040 Carpinus fangiana HOM05D009197 ORTHO05D010857 4.4e-07 58.5 132 37.1
Haze_07407 Corylus avellana HOM05D009197 ORTHO05D010857 7.6e-07 57.8 120 35.8
ClCG01G014220 Citrullus lanatus HOM05D022550 ORTHO05D025091 9.9e-07 57.4 140 35.7
Gohir.A11G028000 Gossypium hirsutum HOM05D009197 ORTHO05D010857 2.2e-06 56.2 131 35.1
Nitab4.5_0000003g0200 Nicotiana tabacum HOM05D009197 ORTHO05D010857 2.2e-06 56.2 128 35.9
CSS0023152 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 2.9e-06 55.8 120 34.2
CAN.G628.60 Capsicum annuum HOM05D009197 ORTHO05D010857 3.8e-06 55.5 126 36.5
Sed0012922 Sechium edule HOM05D022550 ORTHO05D025091 6.4e-06 54.7 128 35.9
Sc04g0008740 Simmondsia chinensis HOM05D017674 ORTHO05D019531 6.4e-06 54.7 136 31.6
Thecc.03G071400 Theobroma cacao HOM05D009197 ORTHO05D010857 6.4e-06 54.7 129 31.8
Peaxi162Scf00689g00559 Petunia axillaris HOM05D000207 ORTHO05D002370 8.4e-06 54.3 125 32.8


User provided reference genes

Program Settings