Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 2.6e-98 362.1 189 100.0
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 2.8e-76 288.9 189 83.1
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 2.7e-74 282.3 189 81.0
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 3.3e-72 275.4 191 75.4
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 5.6e-64 248.1 185 73.5
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 2.0e-61 239.6 178 71.3
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 2.6e-61 239.2 178 71.3
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 2.6e-61 239.2 188 68.1
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 9.8e-61 237.3 185 67.0
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 1.3e-60 236.9 194 67.0
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 4.1e-59 231.9 185 63.2
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 5.4e-59 231.5 184 64.7
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 2.7e-58 229.2 184 64.1
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 2.7e-58 229.2 183 67.8
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 1.7e-57 226.5 160 73.8
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 7.3e-56 221.1 184 64.7
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 1.2e-55 220.3 184 62.5
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 1.2e-55 220.3 177 62.1
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 2.8e-55 219.2 191 62.8
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 3.6e-55 218.8 186 65.1
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 2.3e-54 216.1 180 60.6
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 3.1e-54 215.7 147 70.1
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 6.8e-54 214.5 174 63.2
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 1.2e-53 213.8 177 62.1
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 1.5e-53 213.4 181 61.3
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.5e-53 213.4 181 59.1
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 3.4e-53 212.2 181 61.3
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 4.4e-53 211.8 170 65.9
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 4.4e-53 211.8 175 63.4
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 9.9e-53 210.7 177 60.5
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.3e-52 210.3 147 68.0
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.7e-52 209.9 170 64.1
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 1.7e-52 209.9 183 57.9
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 2.9e-52 209.1 189 60.3
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 1.1e-51 207.2 180 61.7
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 1.9e-51 206.5 141 70.9
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 2.4e-51 206.1 166 62.7
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 1.2e-50 203.8 142 71.1
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 1.6e-50 203.4 139 70.5
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 2.3e-49 199.5 168 60.1
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 3.9e-49 198.7 178 61.2
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 5.1e-49 198.4 139 66.9
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 1.1e-48 197.2 187 57.2
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 3.3e-48 195.7 175 56.6
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 5.6e-48 194.9 171 56.7
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 7.3e-48 194.5 173 57.2
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 9.5e-48 194.1 170 60.6
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 2.1e-47 193.0 155 61.9
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 2.1e-47 193.0 170 58.2
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 2.1e-47 193.0 170 58.2
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 2.8e-47 192.6 177 57.6
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 4.7e-47 191.8 175 60.0
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 8.1e-47 191.0 152 59.9
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 1.8e-46 189.9 181 55.8
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 3.1e-46 189.1 171 60.2
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 5.2e-46 188.3 180 53.3
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 5.2e-46 188.3 171 55.0
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 6.8e-46 188.0 148 65.5
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 1.5e-45 186.8 136 66.9
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 2.0e-45 186.4 153 60.8
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 2.0e-45 186.4 170 54.7
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 2.6e-45 186.0 177 54.8
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 3.4e-45 185.7 171 57.9
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 5.8e-45 184.9 172 58.1
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 9.9e-45 184.1 149 57.7
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 2.2e-44 183.0 174 54.6
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 2.9e-44 182.6 174 56.3
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 2.4e-43 179.5 144 61.1
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 3.2e-43 179.1 168 53.6
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 4.2e-43 178.7 179 54.7
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 4.2e-43 178.7 179 54.7
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 1.2e-42 177.2 179 54.2
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 2.7e-42 176.0 178 52.2
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.3e-41 172.9 124 67.7
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 8.7e-41 171.0 134 62.7
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 5.6e-40 168.3 188 48.9
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 2.1e-39 166.4 141 58.9
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 3.6e-39 165.6 200 49.5
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 4.7e-39 165.2 177 50.3
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 5.3e-38 161.8 124 63.7
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 3.8e-36 155.6 128 60.9
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 8.4e-36 154.5 119 63.9
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 2.8e-31 139.4 116 58.6
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 8.1e-31 137.9 121 57.0
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 1.4e-30 137.1 110 60.9
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 4.0e-30 135.6 173 45.1
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 6.9e-30 134.8 110 60.0
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.6e-29 132.9 119 60.5
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 3.4e-29 132.5 103 70.9
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 3.8e-28 129.0 81 71.6
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 5.4e-27 125.2 140 45.0
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 1.1e-24 117.5 118 51.7
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 2.8e-23 112.8 105 52.4
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 3.7e-23 112.5 124 50.8
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 8.4e-20 101.3 91 52.7
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 7.1e-19 98.2 77 63.6
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 1.9e-16 90.1 151 37.1
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 7.4e-16 88.2 69 58.0
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 2.4e-14 83.2 123 36.6
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 4.5e-13 79.0 110 35.5
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 1.1e-11 74.3 92 44.6


User provided reference genes

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