Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G075400 Glycine max HOM05D005260 ORTHO05D006390 1.5e-203 712.6 364 100.0
Glyma.02G202400 Glycine max HOM05D005260 ORTHO05D006390 3.8e-186 654.8 365 91.2
Phvul.003G157300 Phaseolus vulgaris HOM05D005260 ORTHO05D006390 2.1e-168 595.9 366 81.7
VMungo1215G1942 Vigna mungo HOM05D005260 ORTHO05D006390 1.7e-154 549.7 366 77.3
Psat4g008640 Pisum sativum HOM05D005260 ORTHO05D006390 1.5e-150 536.6 371 75.5
Ca_21113_v3 Cicer arietinum L. HOM05D005260 ORTHO05D006390 1.2e-147 526.9 373 74.3
TPR.G9269 Trifolium pratense HOM05D005260 ORTHO05D006390 2.1e-144 516.2 373 72.9
Lj4g0015138 Lotus japonicus HOM05D005260 ORTHO05D006390 1.0e-143 513.8 367 74.9
Medtr4g131190 Medicago truncatula HOM05D005260 ORTHO05D006390 3.1e-143 512.3 362 73.2
Lalb_Chr13g0300941 Lupinus albus HOM05D005260 ORTHO05D006390 1.9e-140 503.1 380 73.2
QL02p092738 Quercus lobata HOM05D005260 ORTHO05D006390 1.6e-139 500.0 380 70.3
FAN19G1826 Fragaria x ananassa HOM05D005260 ORTHO05D006390 4.9e-133 478.4 374 69.3
CSS0012073 Camellia sinensis var. sinensis HOM05D005260 ORTHO05D006390 6.4e-133 478.0 387 68.0
Manes.14G111500 Manihot esculenta HOM05D005260 ORTHO05D006390 8.3e-133 477.6 378 66.4
Eucgr.C02595 Eucalyptus grandis HOM05D005260 ORTHO05D006390 7.0e-132 474.6 375 66.4
FAN23G1120 Fragaria x ananassa HOM05D005260 ORTHO05D006390 2.1e-131 473.0 374 67.9
Prupe.7G260500 Prunus persica HOM05D005260 ORTHO05D006390 1.0e-130 470.7 384 66.4
FAN26G1108 Fragaria x ananassa HOM05D005260 ORTHO05D006390 1.7e-130 469.9 370 68.1
Haze_19232 Corylus avellana HOM05D005260 ORTHO05D006390 2.3e-130 469.5 375 67.7
FAN28G1391 Fragaria x ananassa HOM05D005260 ORTHO05D006390 3.0e-130 469.2 370 67.6
Cfa020845 Carpinus fangiana HOM05D005260 ORTHO05D006390 8.6e-130 467.6 375 67.5
FvH4_1g01150 Fragaria vesca HOM05D005260 ORTHO05D006390 1.5e-129 466.8 375 66.9
Hma1.2p1_0028F.1_g017400 Hydrangea macrophylla HOM05D005260 ORTHO05D006390 4.3e-129 465.3 387 65.4
RcHm_v2.0_Chr2g0085941 Rosa chinensis HOM05D005260 ORTHO05D006390 2.8e-128 462.6 381 66.4
Cc06_g15200 Coffea canephora HOM05D005260 ORTHO05D006390 3.6e-128 462.2 385 65.5
Rhsim01G0045600 Rhododendron simsii HOM05D005260 ORTHO05D006390 6.2e-128 461.5 390 65.4
Potri.018G109800 Populus trichocarpa HOM05D005260 ORTHO05D006390 8.1e-128 461.1 381 65.6
MD15G1155100 Malus domestica HOM05D005260 ORTHO05D006390 3.1e-127 459.1 383 65.0
CiPaw.15G174600 Carya illinoinensis HOM05D005260 ORTHO05D006390 8.9e-127 457.6 383 65.5
Rhsim01G0035700 Rhododendron simsii HOM05D005260 ORTHO05D006390 2.0e-126 456.4 388 65.5
Rhsim01G0036000 Rhododendron simsii HOM05D005260 ORTHO05D006390 3.4e-126 455.7 390 64.9
Ciclev10008691m.g Citrus clementina HOM05D005260 ORTHO05D006390 1.3e-125 453.8 373 65.4
Potri.006G186900 Populus trichocarpa HOM05D005260 ORTHO05D006390 4.9e-125 451.8 382 64.4
TAR625G1225 Trochodendron aralioides HOM05D005260 ORTHO05D006390 1.1e-124 450.7 380 64.7
TAR383G0874 Trochodendron aralioides HOM05D005260 ORTHO05D006390 3.2e-124 449.1 379 62.8
CsaV3_1G028770 Cucumis sativus L. HOM05D005260 ORTHO05D006390 7.1e-124 448.0 393 63.6
Sabra18G0092700 Salix brachista HOM05D005260 ORTHO05D006390 1.2e-123 447.2 383 63.7
RhsimUnG0040000 Rhododendron simsii HOM05D005260 ORTHO05D006390 1.6e-123 446.8 380 64.7
Sc18g0000130 Simmondsia chinensis HOM05D005260 ORTHO05D006390 1.6e-123 446.8 389 63.0
ClCG06G015480 Citrullus lanatus HOM05D005260 ORTHO05D006390 6.0e-123 444.9 392 63.5
Sabra06G0142800 Salix brachista HOM05D005260 ORTHO05D006390 7.8e-123 444.5 373 63.3
Duzib168G1964 Durio zibethinus HOM05D005260 ORTHO05D006390 1.0e-122 444.1 371 65.2
MELO3C010238.2 Cucumis melo HOM05D005260 ORTHO05D006390 5.1e-122 441.8 393 62.8
Thecc.09G033300 Theobroma cacao HOM05D005260 ORTHO05D006390 1.5e-121 440.3 371 64.4
TWI34G1822 Tripterygium wilfordii HOM05D005260 ORTHO05D006390 1.9e-121 439.9 384 63.0
Nitab4.5_0008157g0020 Nicotiana tabacum HOM05D005260 ORTHO05D006390 2.5e-121 439.5 400 61.2
Sabra06G0141800 Salix brachista HOM05D005260 ORTHO05D006390 9.5e-121 437.6 374 62.6
Sopen07g001450 Solanum pennellii HOM05D005260 ORTHO05D006390 2.8e-120 436.0 399 60.7
Gohir.A13G184700 Gossypium hirsutum HOM05D005260 ORTHO05D006390 4.7e-120 435.3 370 64.6
Nitab4.5_0001201g0060 Nicotiana tabacum HOM05D005260 ORTHO05D006390 1.4e-119 433.7 381 62.2
Sed0012515 Sechium edule HOM05D005260 ORTHO05D006390 1.8e-119 433.3 390 63.3
Solyc07g005340.2 Solanum lycopersicum HOM05D005260 ORTHO05D006390 3.1e-119 432.6 399 60.4
Lsat_1_v5_gn_6_38260 Lactuca sativa HOM05D005260 ORTHO05D006390 4.0e-119 432.2 379 62.5
PGSC0003DMG400003180 Solanum tuberosum HOM05D005260 ORTHO05D006390 4.0e-119 432.2 399 60.4
Gorai.013G217000 Gossypium raimondii HOM05D005260 ORTHO05D006390 8.9e-119 431.0 370 64.1
PGR102G1636 Punica granatum HOM05D005260 ORTHO05D006390 8.9e-119 431.0 376 62.8
Gohir.D13G191100 Gossypium hirsutum HOM05D005260 ORTHO05D006390 2.0e-118 429.9 369 64.0
Peaxi162Scf00347g00088 Petunia axillaris HOM05D005260 ORTHO05D006390 2.0e-118 429.9 399 59.6
CAN.G1116.9 Capsicum annuum HOM05D005260 ORTHO05D006390 9.9e-118 427.6 396 61.6
Duzib150G0891 Durio zibethinus HOM05D005260 ORTHO05D006390 4.2e-116 422.2 370 63.5
SGA_v2.0_scaffold265G46122 Striga asiatica HOM05D005260 ORTHO05D006390 2.1e-115 419.9 373 61.1
Atru.chr7.58 Acer truncatum HOM05D005260 ORTHO05D006390 2.5e-113 412.9 356 64.3
Atru.chr6.1391 Acer truncatum HOM05D005260 ORTHO05D006390 4.3e-113 412.1 356 64.3
Actinidia04287 Actinidia chinensis HOM05D005260 ORTHO05D006390 9.6e-113 411.0 377 61.0
HanXRQChr13g0397631 Helianthus annuus HOM05D005260 ORTHO05D006390 1.8e-111 406.8 390 58.2
Oeu050475.1 Olea europaea HOM05D005260 ORTHO05D006390 1.8e-111 406.8 378 61.1
Oeu051690.1 Olea europaea HOM05D005260 ORTHO05D006390 3.1e-111 406.0 380 61.1
Cpa.g.sc46.130 Carica papaya HOM05D005260 ORTHO05D006390 5.3e-111 405.2 383 58.5
MSTRG.6120 Avicennia marina HOM05D005260 ORTHO05D006390 6.9e-111 404.8 375 59.7
Migut.J01331 Erythranthe guttata HOM05D005260 ORTHO05D006390 9.0e-111 404.4 376 60.1
Gorai.006G273400 Gossypium raimondii HOM05D005260 ORTHO05D006390 9.0e-111 404.4 348 63.2
ECA233G0390 Erigeron canadensis HOM05D005260 ORTHO05D006390 1.5e-110 403.7 356 63.2
SHI04751 Sapria himalayana HOM05D005260 ORTHO05D006390 5.8e-110 401.7 365 59.5
Lj7P455T24 Lonicera japonica HOM05D005260 ORTHO05D006390 1.3e-109 400.6 346 63.0
BraA10t43614Z Brassica rapa HOM05D005260 ORTHO05D006390 1.7e-109 400.2 375 58.9
PSO170G6608 Papaver somniferum HOM05D005260 ORTHO05D006390 1.7e-109 400.2 400 57.5
A10p16150 Brassica napus HOM05D005260 ORTHO05D006390 4.9e-109 398.7 375 58.7
BolC9t57839H Brassica oleracea HOM05D005260 ORTHO05D006390 4.9e-109 398.7 375 59.2
GSVIVG01023592001 Vitis vinifera HOM05D005260 ORTHO05D006390 1.4e-108 397.1 366 61.2
BcaC04g19916 Brassica carinata HOM05D005260 ORTHO05D006390 4.2e-108 395.6 375 58.7
PSO017G5909 Papaver somniferum HOM05D005260 ORTHO05D006390 5.4e-108 395.2 400 57.2
C09p49880 Brassica napus HOM05D005260 ORTHO05D006390 9.3e-108 394.4 375 58.4
BcaB05g22395 Brassica carinata HOM05D005260 ORTHO05D006390 1.2e-107 394.0 369 59.6
ATR0739G050 Amborella trichopoda HOM05D005260 ORTHO05D006390 3.0e-106 389.4 391 55.5
BolC2t07483H Brassica oleracea HOM05D005260 ORTHO05D006390 3.0e-106 389.4 370 59.5
THA.LOC104817828 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 3.0e-106 389.4 374 58.6
A02p08050 Brassica napus HOM05D005260 ORTHO05D006390 6.6e-106 388.3 371 58.8
AT5G58020 Arabidopsis thaliana HOM05D005260 ORTHO05D006390 8.7e-106 387.9 375 58.7
Carub.0008s1857 Capsella rubella HOM05D005260 ORTHO05D006390 3.3e-105 386.0 376 58.0
AL8G34120 Arabidopsis lyrata HOM05D005260 ORTHO05D006390 5.6e-105 385.2 376 58.2
BraA02t05877Z Brassica rapa HOM05D005260 ORTHO05D006390 1.3e-104 384.0 371 59.0
Thhalv10013961m.g Eutrema salsugineum HOM05D005260 ORTHO05D006390 1.3e-104 384.0 362 58.6
SalBow1G8640 Salvia bowleyana HOM05D005260 ORTHO05D006390 3.6e-104 382.5 376 57.2
CARHR271830 Cardamine hirsuta HOM05D005260 ORTHO05D006390 8.1e-104 381.3 376 57.7
Sp6g19700 Schrenkiella parvula HOM05D005260 ORTHO05D006390 2.4e-103 379.8 376 57.7
COL.COLO4_18779 Corchorus olitorius HOM05D005260 ORTHO05D006390 5.3e-103 378.6 371 59.8
C02p13690 Brassica napus HOM05D005260 ORTHO05D006390 9.0e-103 377.9 371 57.7
THA.LOC104817826 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 2.6e-102 376.3 373 57.1
MBI14_g37102_MAGBIO Magnolia biondii HOM05D005260 ORTHO05D006390 5.8e-102 375.2 387 56.6
Aa31LG3G13860 Aethionema arabicum HOM05D005260 ORTHO05D006390 6.4e-101 371.7 374 55.6
Aqoxy3G00834 Aquilegia oxysepala HOM05D005260 ORTHO05D006390 1.6e-99 367.1 377 60.5
EL10Ac8g18850 Beta vulgaris HOM05D005260 ORTHO05D006390 1.9e-97 360.1 392 53.1
Ah.11g045050 Amaranthus hybridus HOM05D005260 ORTHO05D006390 4.3e-97 359.0 374 54.3
DCAR_020883 Daucus carota HOM05D005260 ORTHO05D006390 2.8e-96 356.3 273 68.1
Os06g0183900 Oryza sativa ssp. japonica HOM05D005260 ORTHO05D006390 1.4e-95 354.0 327 58.4
SGA_v2.0_scaffold45G17044 Striga asiatica HOM05D005260 ORTHO05D006390 1.8e-95 353.6 370 55.9
Pp3c14_10930 Physcomitrium patens HOM05D005260 ORTHO05D006390 5.8e-94 348.6 374 52.9
CiPaw.16G114800 Carya illinoinensis HOM05D005260 ORTHO05D006390 1.8e-90 337.0 287 62.7
SEGI_13576 Sequoiadendron giganteum HOM05D005260 ORTHO05D006390 1.3e-88 330.9 383 50.4
Dinv42879 Davidia involucrata HOM05D005260 ORTHO05D006390 1.7e-85 320.5 349 57.0
Dinv43221 Davidia involucrata HOM05D005260 ORTHO05D006390 1.7e-85 320.5 349 57.0
Gohir.D09G249000 Gossypium hirsutum HOM05D005260 ORTHO05D006390 3.8e-85 319.3 284 61.3
AagrBONN_evm.TU.Sc2ySwM_228.4055 Anthoceros agrestis HOM05D005260 ORTHO05D006390 6.1e-83 312.0 372 47.6
Mapoly0043s0023 Marchantia polymorpha HOM05D005260 ORTHO05D006390 1.5e-81 307.4 374 47.6
AUR62031434 Chenopodium quinoa HOM05D005260 ORTHO05D006390 9.7e-81 304.7 312 53.5
SMO307G0072 Selaginella moellendorffii HOM05D005260 ORTHO05D006390 2.8e-80 303.1 322 52.8
AUR62021106 Chenopodium quinoa HOM05D005260 ORTHO05D006390 1.4e-71 274.2 246 56.9
CBR_g44540 Chara braunii HOM05D005260 ORTHO05D006390 4.2e-68 262.7 354 44.4
Actinidia38337 Actinidia chinensis HOM05D005260 ORTHO05D006390 1.2e-67 261.2 169 73.4
Gohir.D07G030400 Gossypium hirsutum HOM05D005260 ORTHO05D006390 3.7e-64 249.6 287 51.6
Gorai.001G031600 Gossypium raimondii HOM05D005260 ORTHO05D006390 8.2e-64 248.4 287 51.2
Lalb_Chr12g0198621 Lupinus albus HOM05D005260 ORTHO05D006390 1.6e-59 234.2 194 67.5
unitig_0.g2819 Utricularia gibba HOM05D005260 ORTHO05D006390 2.5e-52 210.3 217 53.9
HPP92_018747 Vanilla planifolia HOM05D005260 ORTHO05D006390 3.6e-51 206.5 204 58.3
CDE02G0414 Ceratophyllum demersum HOM05D005260 ORTHO05D006390 1.5e-41 174.5 352 38.4
Cre03.g150650 Chlamydomonas reinhardtii HOM05D005260 ORTHO05D006390 1.4e-39 167.9 367 35.1
TAR625G0635 Trochodendron aralioides HOM05D005260 ORTHO05D006390 1.5e-33 147.9 145 58.6
PRCOL_00003864 Prasinoderma coloniale HOM05D005260 ORTHO05D006390 4.4e-33 146.4 190 42.6
AagrBONN_evm.TU.Sc2ySwM_344.4069 Anthoceros agrestis HOM05D005260 ORTHO05D006390 5.4e-31 139.4 176 48.3
HanXRQChr09g0262911 Helianthus annuus HOM05D005260 ORTHO05D006390 2.0e-30 137.5 82 75.6
HPP92_018748 Vanilla planifolia HOM05D005260 ORTHO05D006390 1.0e-29 135.2 130 57.7
Atru.chr13.1961 Acer truncatum HOM05D005260 ORTHO05D006390 3.9e-29 133.3 167 52.1
MELO3C004727.2 Cucumis melo HOM05D005260 ORTHO05D006390 9.5e-28 128.6 105 63.8
ATR0579G027 Amborella trichopoda HOM05D005260 ORTHO05D006390 4.0e-18 96.7 119 47.1
Zm00001eb158280 Zea mays HOM05D005260 ORTHO05D006390 2.4e-15 87.4 83 53.0
MCO05G557 Micromonas commoda HOM05D005260 ORTHO05D006390 2.3e-13 80.9 158 31.0
ClCG06G012260 Citrullus lanatus HOM05D005260 ORTHO05D006390 8.1e-11 72.4 54 66.7
CiPaw.12G098000 Carya illinoinensis HOM05D003547 ORTHO05D004236 1.2e-09 68.6 50 60.0
Cfa026666 Carpinus fangiana HOM05D005260 ORTHO05D006390 1.5e-09 68.2 275 25.1
BolC3t13905H Brassica oleracea HOM05D005260 ORTHO05D006390 4.4e-09 66.6 46 71.7
CBR_g37538 Chara braunii HOM05D005260 ORTHO05D006390 5.8e-09 66.2 247 23.9
unitig_747.g21900 Utricularia gibba HOM05D005260 ORTHO05D006390 6.4e-08 62.8 76 47.4
Cre17.g715950 Chlamydomonas reinhardtii HOM05D005260 ORTHO05D006390 1.2e-06 58.5 165 29.1
Gorai.011G083100 Gossypium raimondii HOM05D005260 ORTHO05D006390 1.2e-06 58.5 71 49.3


User provided reference genes

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