Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G072800 Glycine max HOM05D003426 ORTHO05D003816 2.5e-153 545.4 280 100.0
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 1.0e-109 400.6 281 79.0
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 3.8e-109 398.7 270 81.5
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 2.8e-104 382.5 281 75.8
Glyma.17G193101 Glycine max HOM05D003426 ORTHO05D003816 4.1e-79 298.9 164 94.5
Glyma.02G205001 Glycine max HOM05D003426 ORTHO05D003816 2.6e-49 199.9 281 51.6
Glyma.17G072650 Glycine max HOM05D003426 ORTHO05D003816 1.9e-44 183.7 256 45.7
Phvul.010G050200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 8.6e-37 158.3 252 44.4
Glyma.17G193200 Glycine max HOM05D003426 ORTHO05D003816 5.8e-33 145.6 183 54.6
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 1.1e-31 141.4 308 40.9
Glyma.17G072700 Glycine max HOM05D003426 ORTHO05D003816 3.3e-28 129.8 174 47.1
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 2.0e-25 120.6 285 35.4
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 2.0e-25 120.6 285 35.4
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 4.1e-23 112.8 279 35.5
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 1.0e-21 108.2 309 33.7
Lj4g0006994 Lotus japonicus HOM05D003426 ORTHO05D003816 3.6e-19 99.8 282 33.0
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 4.7e-19 99.4 255 35.3
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 1.4e-18 97.8 243 35.0
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 1.8e-18 97.4 287 32.4
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 3.1e-18 96.7 287 32.1
VMungo1215G0444 Vigna mungo HOM05D003426 ORTHO05D003816 6.8e-18 95.5 298 33.2
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 3.4e-17 93.2 308 30.2
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 5.8e-17 92.4 285 31.6
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 7.6e-17 92.0 297 31.0
Lalb_Chr13g0300811 Lupinus albus HOM05D003426 ORTHO05D003816 1.3e-16 91.3 330 30.6
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 6.4e-16 89.0 310 29.4
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 1.1e-15 88.2 260 32.7
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 2.4e-15 87.0 271 33.2
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 4.2e-15 86.3 278 32.4
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 5.4e-15 85.9 275 32.7
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 5.4e-15 85.9 273 33.3
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 7.1e-15 85.5 275 32.4
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 1.6e-14 84.3 257 30.0
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.6e-14 84.3 325 28.6
THA.LOC104803917 Tarenaya hassleriana HOM05D003426 ORTHO05D003816 2.7e-14 83.6 288 30.9
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 3.5e-14 83.2 189 33.9
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 4.6e-14 82.8 240 30.8
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 1.0e-13 81.6 301 28.6
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 2.3e-13 80.5 280 30.7
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 5.1e-13 79.3 198 32.3
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 5.1e-13 79.3 241 32.0
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 8.7e-13 78.6 253 32.0
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 1.5e-12 77.8 244 31.6
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 1.9e-12 77.4 84 52.4
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 3.3e-12 76.6 213 32.4
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 5.6e-12 75.9 225 32.9
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 5.6e-12 75.9 222 32.4
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 5.6e-12 75.9 153 35.3
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 9.6e-12 75.1 272 30.1
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 9.6e-12 75.1 192 32.8
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 1.6e-11 74.3 85 50.6
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 1.6e-11 74.3 85 50.6
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 1.6e-11 74.3 275 29.8
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 2.1e-11 73.9 111 36.9
PGSC0003DMG400040189 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.1e-11 73.9 143 39.2
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 2.8e-11 73.6 276 27.2
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 3.6e-11 73.2 346 24.6
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 4.8e-11 72.8 128 37.5
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 6.2e-11 72.4 226 33.6
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 8.1e-11 72.0 177 36.2
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 8.1e-11 72.0 83 47.0
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 1.1e-10 71.6 253 28.5
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 1.8e-10 70.9 200 32.5
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 1.8e-10 70.9 213 30.5
Psat4g009680 Pisum sativum HOM05D003426 ORTHO05D003816 1.8e-10 70.9 106 42.5
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 2.4e-10 70.5 182 31.9
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 2.4e-10 70.5 314 29.9
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 3.1e-10 70.1 167 34.1
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 4.0e-10 69.7 125 37.6
Dinv17422 Davidia involucrata HOM05D003426 ORTHO05D003816 4.0e-10 69.7 187 31.0
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 5.3e-10 69.3 116 41.4
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 5.3e-10 69.3 157 34.4
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 5.3e-10 69.3 91 45.1
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 6.9e-10 68.9 87 46.0
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 6.9e-10 68.9 230 30.0
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 6.9e-10 68.9 85 42.4
Psat4g010040 Pisum sativum HOM05D003426 ORTHO05D003816 9.0e-10 68.6 92 50.0
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 1.2e-09 68.2 186 35.5
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 1.5e-09 67.8 273 28.2
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 4.4e-09 66.2 100 42.0
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 5.8e-09 65.9 67 49.3
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 7.6e-09 65.5 213 30.5
DCAR_019401 Daucus carota HOM05D003426 ORTHO05D003816 9.9e-09 65.1 89 41.6
vmacro06066 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 9.9e-09 65.1 211 29.9
TPR.G24886 Trifolium pratense HOM05D003426 ORTHO05D003816 1.3e-08 64.7 274 31.0
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 1.7e-08 64.3 79 46.8
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 1.7e-08 64.3 67 50.7
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 2.2e-08 63.9 271 28.8
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 2.2e-08 63.9 122 40.2
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 2.2e-08 63.9 240 28.8
Psat6g228520 Pisum sativum HOM05D003426 ORTHO05D003816 2.9e-08 63.5 117 37.6
PGSC0003DMG400043134 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.9e-08 63.5 116 42.2
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 6.4e-08 62.4 271 28.4
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.1e-07 61.6 68 48.5
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.4e-07 61.2 68 44.1
Sopen10g015150 Solanum pennellii HOM05D003426 ORTHO05D003816 1.4e-07 61.2 63 49.2
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 2.4e-07 60.5 67 44.8
Solyc10g048140.2 Solanum lycopersicum HOM05D003426 ORTHO05D003816 2.4e-07 60.5 77 48.1
arahy.Tifrunner.gnm1.ann1.H6N2T4 Arachis hypogaea HOM05D003426 ORTHO05D003816 3.2e-07 60.1 254 28.7
FAN28G0527 Fragaria x ananassa HOM05D003426 ORTHO05D003816 4.2e-07 59.7 172 30.2
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 5.4e-07 59.3 237 28.7
PSO675G7028 Papaver somniferum HOM05D003426 ORTHO05D003816 7.1e-07 58.9 192 31.8
Sopen10g019310 Solanum pennellii HOM05D003426 ORTHO05D003816 7.1e-07 58.9 77 46.8
Dinv08190 Davidia involucrata HOM05D003426 ORTHO05D003816 1.2e-06 58.2 79 43.0
FAN26G0769 Fragaria x ananassa HOM05D003426 ORTHO05D003816 1.6e-06 57.8 319 26.0
Zm00001eb388770 Zea mays HOM05D003426 ORTHO05D003816 1.6e-06 57.8 51 51.0
PGSC0003DMG400037110 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.1e-06 57.4 65 50.8
PGSC0003DMG400038550 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.1e-06 57.4 65 50.8
SGA_v2.0_scaffold83G26387 Striga asiatica HOM05D000650 ORTHO05D000735 2.1e-06 57.4 97 30.9
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 3.5e-06 56.6 67 40.3
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 3.5e-06 56.6 115 34.8
QL02p018769 Quercus lobata HOM05D003426 ORTHO05D003816 4.6e-06 56.2 71 46.5
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 4.6e-06 56.2 85 36.5
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 6.0e-06 55.8 75 40.0
AUR62032422 Chenopodium quinoa HOM05D016866 ORTHO05D003816 6.0e-06 55.8 97 38.1
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 6.0e-06 55.8 88 39.8
Manes.05G189300 Manihot esculenta HOM05D000650 ORTHO05D010020 7.9e-06 55.5 50 48.0
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 7.9e-06 55.5 56 57.1
Sed0021282 Sechium edule HOM05D003426 ORTHO05D003816 7.9e-06 55.5 121 33.1


User provided reference genes

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