Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 5.3e-118 427.9 257 100.0
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 1.7e-111 406.4 257 88.3
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 1.6e-98 363.2 256 87.1
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 2.7e-93 345.9 256 78.5
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 4.6e-93 345.1 256 77.3
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 2.5e-91 339.3 256 76.6
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 7.0e-86 321.2 257 73.9
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 7.0e-86 321.2 256 74.2
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 2.7e-85 319.3 267 70.4
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 1.3e-84 317.0 254 72.8
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 4.0e-81 305.4 254 71.7
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 1.1e-78 297.4 225 76.9
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 5.1e-76 288.5 254 66.9
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 2.1e-74 283.1 253 66.0
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 1.4e-73 280.4 253 65.6
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 9.2e-70 267.7 254 63.0
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 2.7e-69 266.2 253 62.8
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 3.5e-69 265.8 243 62.1
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 7.8e-69 264.6 241 63.1
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 1.7e-68 263.5 258 61.6
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.7e-68 263.5 230 65.7
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.7e-68 263.5 230 66.5
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 6.6e-68 261.5 258 60.9
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 1.1e-67 260.8 255 62.0
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 3.3e-67 259.2 227 66.1
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 4.3e-67 258.8 230 69.1
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 4.7e-66 255.4 242 62.4
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.1e-65 254.2 221 67.4
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 1.4e-65 253.8 246 63.4
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 1.8e-65 253.4 246 63.0
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 2.4e-65 253.1 272 59.6
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 2.4e-65 253.1 261 60.2
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 4.0e-65 252.3 248 61.7
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 5.2e-65 251.9 252 61.9
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 5.2e-65 251.9 259 59.5
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 6.9e-65 251.5 250 63.6
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 8.9e-65 251.1 266 60.5
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 8.9e-65 251.1 268 59.0
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 1.5e-64 250.4 259 59.1
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 2.0e-64 250.0 229 64.6
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 2.6e-64 249.6 224 63.8
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 2.6e-64 249.6 229 64.6
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 5.8e-64 248.4 237 62.4
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 3.8e-63 245.7 247 60.3
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 8.4e-63 244.6 246 61.8
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 1.4e-62 243.8 256 59.4
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 1.6e-61 240.4 253 58.5
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 2.1e-61 240.0 304 52.0
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 3.5e-61 239.2 248 60.5
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 7.8e-61 238.0 255 55.7
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 1.0e-60 237.7 243 59.7
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 5.1e-60 235.3 258 55.4
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 8.7e-60 234.6 303 51.5
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 1.5e-59 233.8 232 60.3
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 3.3e-59 232.6 185 76.2
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 7.3e-59 231.5 240 59.2
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 1.6e-58 230.3 262 55.3
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 2.8e-58 229.6 189 71.4
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 1.1e-57 227.6 250 57.2
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 2.4e-57 226.5 237 56.5
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 3.1e-57 226.1 223 60.1
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 1.2e-56 224.2 241 58.1
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 2.6e-56 223.0 267 52.8
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 5.8e-56 221.9 267 52.4
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 7.6e-56 221.5 241 55.2
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 9.9e-56 221.1 234 55.6
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 1.3e-55 220.7 267 52.1
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 2.9e-55 219.5 226 58.0
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 3.8e-55 219.2 241 55.2
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 4.9e-55 218.8 244 58.2
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 2.4e-54 216.5 222 59.9
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 5.4e-54 215.3 319 46.4
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 7.1e-54 214.9 256 57.8
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 9.3e-54 214.5 222 59.5
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 2.7e-53 213.0 253 53.0
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 4.6e-53 212.2 234 56.0
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 1.3e-52 210.7 220 58.2
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 2.3e-52 209.9 246 55.3
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 2.3e-52 209.9 216 61.1
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 3.0e-52 209.5 234 56.0
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 3.9e-52 209.1 235 56.6
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 6.7e-52 208.4 240 55.0
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 3.3e-51 206.1 230 56.5
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 4.3e-51 205.7 234 55.1
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 5.6e-51 205.3 236 55.1
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 9.6e-51 204.5 229 54.6
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 9.6e-51 204.5 231 55.4
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 1.6e-50 203.8 262 51.5
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 2.8e-50 203.0 231 56.7
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 4.8e-50 202.2 162 75.3
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 6.2e-50 201.8 229 55.5
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 6.2e-50 201.8 229 55.5
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 5.3e-49 198.7 237 53.2
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 2.6e-48 196.4 229 55.0
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 2.6e-48 196.4 229 55.0
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 3.4e-48 196.1 229 55.0
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 3.4e-48 196.1 259 49.4
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 7.6e-48 194.9 239 51.9
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 1.7e-47 193.7 251 51.8
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 3.8e-47 192.6 226 54.0
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 1.1e-46 191.0 229 54.6
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 3.2e-46 189.5 229 54.1
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 5.5e-46 188.7 225 53.8
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 1.1e-43 181.0 247 49.8
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 2.5e-43 179.9 251 48.6
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 3.3e-43 179.5 236 49.2
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 2.8e-42 176.4 247 49.0
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 1.0e-39 167.9 245 46.9
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 3.8e-39 166.0 245 48.2
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 1.1e-38 164.5 261 46.4
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 3.5e-37 159.5 121 74.4
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 5.1e-36 155.6 241 42.3
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 2.6e-32 143.3 151 55.0
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 4.5e-32 142.5 136 64.0
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 7.2e-30 135.2 134 61.9
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 3.9e-28 129.4 167 49.7
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 1.5e-27 127.5 164 51.2
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 1.7e-23 114.0 140 52.1
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 1.9e-22 110.5 130 46.2
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 2.5e-22 110.2 189 42.3
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 5.5e-22 109.0 270 33.3
Ca_13618_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 6.1e-13 79.0 60 71.7
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 6.1e-13 79.0 166 38.6
Actinidia31584 Actinidia chinensis HOM05D005991 ORTHO05D007408 8.8e-12 75.1 196 38.8
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 2.4e-09 67.0 158 37.3
Sabra10G0116500 Salix brachista HOM05D005991 ORTHO05D007408 1.0e-07 61.6 110 37.3
AL1G65220 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 2.2e-07 60.5 89 48.3


User provided reference genes

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