Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G022050 Glycine max HOM05D000097 ORTHO05D000041 1.6e-42 175.6 87 100.0
Glyma.07G252400 Glycine max HOM05D000097 ORTHO05D000041 1.9e-38 162.2 86 91.9
Phvul.003G099900 Phaseolus vulgaris HOM05D000097 ORTHO05D000041 1.3e-28 129.4 86 72.1
VMungo1215G3377 Vigna mungo HOM05D000097 ORTHO05D000041 2.3e-28 128.6 86 74.4
Lj4g0005456 Lotus japonicus HOM05D000097 ORTHO05D000041 2.0e-24 115.5 86 70.9
TPR.G1508 Trifolium pratense HOM05D000097 ORTHO05D000041 3.3e-19 98.2 86 60.5
Medtr2g020450 Medicago truncatula HOM05D000097 ORTHO05D000041 4.7e-18 94.4 86 59.3
Medtr2g020510 Medicago truncatula HOM05D000097 ORTHO05D000041 2.4e-17 92.0 86 57.0
Medtr2g020470 Medicago truncatula HOM05D000097 ORTHO05D000041 1.2e-16 89.7 86 57.0
Psat1g186680 Pisum sativum HOM05D000097 ORTHO05D000041 1.5e-16 89.4 89 53.9
arahy.Tifrunner.gnm1.ann1.BJSC2Z Arachis hypogaea HOM05D000097 ORTHO05D000041 1.9e-14 82.4 85 52.9
Lalb_Chr20g0118221 Lupinus albus HOM05D000097 ORTHO05D000041 2.4e-14 82.0 90 52.2
Lj6g0020587 Lotus japonicus HOM05D000097 ORTHO05D000041 5.4e-14 80.9 91 51.6
Ca_00584_v3 Cicer arietinum L. HOM05D000097 ORTHO05D000041 3.5e-13 78.2 78 52.6
Glyma.13G214100 Glycine max HOM05D000097 ORTHO05D000041 2.3e-12 75.5 89 49.4
Glyma.13G213800 Glycine max HOM05D000097 ORTHO05D000041 5.1e-12 74.3 90 50.0
arahy.Tifrunner.gnm1.ann1.1CD59K Arachis hypogaea HOM05D000097 ORTHO05D000041 3.3e-11 71.6 75 53.3
Phvul.006G160200 Phaseolus vulgaris HOM05D000097 ORTHO05D000041 3.3e-11 71.6 89 51.7
RcHm_v2.0_Chr4g0414131 Rosa chinensis HOM05D000097 ORTHO05D000041 8.1e-10 67.0 51 60.8
VMungo0540G1282 Vigna mungo HOM05D000097 ORTHO05D000041 2.4e-09 65.5 82 42.7
MD13G1283300 Malus domestica HOM05D000097 ORTHO05D000041 5.3e-09 64.3 51 58.8
FvH4_4g13500 Fragaria vesca HOM05D000097 ORTHO05D000041 1.2e-08 63.2 62 51.6
VMungo0540G0336 Vigna mungo HOM05D000097 ORTHO05D000041 1.2e-08 63.2 89 43.8
Ciclev10006510m.g Citrus clementina HOM05D000097 ORTHO05D000041 2.6e-08 62.0 60 55.0
arahy.Tifrunner.gnm1.ann1.6ST5A0 Arachis hypogaea HOM05D000097 ORTHO05D000041 5.8e-08 60.8 96 35.4
Ciclev10004436m.g Citrus clementina HOM05D000097 ORTHO05D000041 5.8e-08 60.8 51 56.9
FAN22G2417 Fragaria x ananassa HOM05D000097 ORTHO05D000041 7.6e-08 60.5 62 50.0
Dinv38234 Davidia involucrata HOM05D000097 ORTHO05D000041 1.7e-07 59.3 107 35.5
FAN07G1278 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.7e-07 59.3 62 48.4
Dinv32891 Davidia involucrata HOM05D000097 ORTHO05D000041 2.2e-07 58.9 62 45.2
Cc01_g19070 Coffea canephora HOM05D000097 ORTHO05D000041 3.8e-07 58.2 51 49.0
Glyma.13G224800 Glycine max HOM05D000097 ORTHO05D000041 3.8e-07 58.2 56 44.6
RcHm_v2.0_Chr6g0290091 Rosa chinensis HOM05D000097 ORTHO05D000041 3.8e-07 58.2 51 49.0
RcHm_v2.0_Chr6g0290111 Rosa chinensis HOM05D000097 ORTHO05D000041 3.8e-07 58.2 51 49.0
PSO832G1868 Papaver somniferum HOM05D000097 ORTHO05D000041 6.4e-07 57.4 107 37.4
FAN27G0465 Fragaria x ananassa HOM05D000097 ORTHO05D000041 8.4e-07 57.0 64 40.6
Sed0024865 Sechium edule HOM05D000097 ORTHO05D000041 8.4e-07 57.0 65 41.5
Ciclev10019036m.g Citrus clementina HOM05D000097 ORTHO05D000041 1.9e-06 55.8 47 48.9
TAR362G0086 Trochodendron aralioides HOM05D000097 ORTHO05D000041 1.9e-06 55.8 51 51.0
Atru.chr4.1703 Acer truncatum HOM05D000097 ORTHO05D000041 2.4e-06 55.5 87 39.1
CANSAT25G2251 Cannabis sativa HOM05D000097 ORTHO05D000041 2.4e-06 55.5 64 40.6
FvH4_2g23030 Fragaria vesca HOM05D000097 ORTHO05D000041 3.2e-06 55.1 60 38.3
PSO210G6515 Papaver somniferum HOM05D000097 ORTHO05D000041 4.2e-06 54.7 48 52.1
MELO3C014331.2 Cucumis melo HOM05D000097 ORTHO05D000041 5.4e-06 54.3 47 51.1
COL.COLO4_09198 Corchorus olitorius HOM05D000097 ORTHO05D000041 7.1e-06 53.9 117 29.9
CsaV3_6G036750 Cucumis sativus L. HOM05D000097 ORTHO05D000041 7.1e-06 53.9 47 51.1


User provided reference genes

Program Settings