Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 3.1e-44 181.4 92 100.0
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 1.9e-41 172.2 92 93.5
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 7.9e-40 166.8 92 89.1
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 3.1e-36 154.8 90 83.3
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 8.0e-32 140.2 89 77.5
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 2.3e-31 138.7 89 76.4
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 4.8e-29 131.0 93 66.7
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 4.8e-29 131.0 100 63.0
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 6.3e-29 130.6 100 62.0
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 6.3e-29 130.6 100 62.0
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 6.3e-29 130.6 100 62.0
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.4e-28 129.4 100 62.0
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 3.1e-28 128.3 80 75.0
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 4.1e-28 127.9 90 73.3
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 5.3e-28 127.5 74 79.7
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 7.0e-28 127.1 94 64.9
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 1.6e-27 125.9 94 64.9
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 1.6e-27 125.9 77 74.0
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 1.6e-27 125.9 77 72.7
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 2.0e-27 125.6 77 72.7
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 2.0e-27 125.6 79 74.7
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 2.7e-27 125.2 80 73.8
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 2.7e-27 125.2 79 72.2
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 2.7e-27 125.2 92 66.3
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 3.5e-27 124.8 85 70.6
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 1.3e-26 122.9 94 64.9
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 1.7e-26 122.5 88 65.9
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 2.2e-26 122.1 85 68.2
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 2.9e-26 121.7 74 75.7
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 3.8e-26 121.3 74 71.6
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 3.8e-26 121.3 73 74.0
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 5.0e-26 120.9 74 74.3
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 6.5e-26 120.6 79 70.9
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 6.5e-26 120.6 79 70.9
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 1.1e-25 119.8 79 69.6
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 1.5e-25 119.4 88 68.2
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 1.9e-25 119.0 86 66.3
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 2.5e-25 118.6 74 74.3
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 3.2e-25 118.2 78 70.5
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 3.2e-25 118.2 79 68.4
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 3.2e-25 118.2 78 69.2
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 3.2e-25 118.2 79 69.6
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 5.5e-25 117.5 79 69.6
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 7.2e-25 117.1 79 68.4
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 7.2e-25 117.1 78 69.2
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 1.6e-24 115.9 93 61.3
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 1.6e-24 115.9 93 61.3
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 2.1e-24 115.5 77 67.5
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 2.1e-24 115.5 78 67.9
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 2.7e-24 115.2 77 67.5
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 4.7e-24 114.4 93 60.2
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 6.1e-24 114.0 81 67.9
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 6.1e-24 114.0 76 67.1
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 8.0e-24 113.6 93 60.2
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 8.0e-24 113.6 91 60.4
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 1.8e-23 112.5 70 71.4
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 1.8e-23 112.5 77 66.2
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 1.8e-23 112.5 85 63.5
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 4.0e-23 111.3 78 62.8
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 5.2e-23 110.9 69 76.8
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.2e-22 109.8 83 57.8
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.2e-22 109.8 79 67.1
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 1.2e-22 109.8 78 64.1
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 1.5e-22 109.4 73 69.9
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 2.6e-22 108.6 65 81.5
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 3.4e-22 108.2 77 63.6
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 3.4e-22 108.2 84 61.9
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 3.4e-22 108.2 78 59.0
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 4.4e-22 107.8 90 60.0
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 4.4e-22 107.8 74 68.9
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 5.7e-22 107.5 81 63.0
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 7.5e-22 107.1 78 61.5
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 9.8e-22 106.7 72 69.4
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 1.7e-21 105.9 72 70.8
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 4.8e-21 104.4 84 60.7
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 1.1e-20 103.2 84 59.5
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 1.8e-20 102.4 72 65.3
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 9.1e-20 100.1 91 50.5
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 4.5e-19 97.8 60 65.0
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 5.9e-19 97.4 89 53.9
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 1.0e-18 96.7 76 61.8
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 2.2e-18 95.5 79 58.2
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 8.5e-18 93.6 105 48.6
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 3.4e-14 81.6 87 41.4
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 8.3e-13 77.0 82 48.8
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 5.4e-12 74.3 49 69.4
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 4.5e-11 71.2 51 66.7
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 5.9e-11 70.9 50 62.0
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 7.8e-11 70.5 47 70.2
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 7.3e-09 63.9 41 68.3
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.4e-07 59.7 69 47.8
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 2.0e-06 55.8 50 58.0


User provided reference genes

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