Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G016450 Glycine max HOM05D000416 ORTHO05D211703 3.4e-24 114.4 66 100.0
Glyma.06G033600 Glycine max HOM05D000416 ORTHO05D000322 4.7e-10 67.4 38 92.1
Medtr2g022490 Medicago truncatula HOM05D000416 ORTHO05D000322 3.4e-08 61.2 41 73.2
Psat1g182320 Pisum sativum HOM05D000416 ORTHO05D000322 5.8e-08 60.5 41 70.7
TPR.G30671 Trifolium pratense HOM05D000416 ORTHO05D000322 7.5e-08 60.1 41 73.2
Medtr2g022480 Medicago truncatula HOM05D000416 ORTHO05D000322 1.3e-07 59.3 41 70.7
Ca_00637_v3 Cicer arietinum L. HOM05D000416 ORTHO05D000322 1.7e-07 58.9 41 70.7
Glyma.13G208000 Glycine max HOM05D000416 ORTHO05D000322 2.2e-07 58.5 41 75.6
VMungo0540G2334 Vigna mungo HOM05D000416 ORTHO05D000322 3.7e-07 57.8 38 76.3
Oeu029589.1 Olea europaea HOM05D000416 ORTHO05D000322 4.9e-07 57.4 38 76.3
MBI17_g34186_MAGBIO Magnolia biondii HOM05D000416 ORTHO05D000322 8.3e-07 56.6 39 69.2
Lj6g0016350 Lotus japonicus HOM05D000416 ORTHO05D000322 1.1e-06 56.2 38 73.7
Phvul.003G092200 Phaseolus vulgaris HOM05D000416 ORTHO05D000322 1.1e-06 56.2 40 70.0
Phvul.006G152800 Phaseolus vulgaris HOM05D000416 ORTHO05D000322 1.1e-06 56.2 41 70.7
Phvul.006G153000 Phaseolus vulgaris HOM05D000416 ORTHO05D000322 1.1e-06 56.2 38 73.7
Phvul.006G153100 Phaseolus vulgaris HOM05D000416 ORTHO05D000322 1.1e-06 56.2 41 70.7
TPR.G1530 Trifolium pratense HOM05D006883 ORTHO05D008624 1.1e-06 56.2 39 74.4
Gorai.011G080800 Gossypium raimondii HOM05D000416 ORTHO05D000322 1.4e-06 55.8 38 71.1
Medtr2g022320 Medicago truncatula HOM05D000416 ORTHO05D000322 1.4e-06 55.8 38 76.3
Psat1g182240 Pisum sativum HOM05D000416 ORTHO05D000322 1.4e-06 55.8 41 65.9
Lj6g0028192 Lotus japonicus HOM05D000416 ORTHO05D000322 1.9e-06 55.5 41 65.9
MBI17_g29200_MAGBIO Magnolia biondii HOM05D000416 ORTHO05D000322 1.9e-06 55.5 38 71.1
Gohir.D10G075000 Gossypium hirsutum HOM05D000416 ORTHO05D000322 2.4e-06 55.1 38 71.1
Lalb_Chr15g0087391 Lupinus albus HOM05D000416 ORTHO05D000322 2.4e-06 55.1 41 68.3
DCAR_002405 Daucus carota HOM05D000416 ORTHO05D000322 3.2e-06 54.7 39 66.7
CANSAT78G2095 Cannabis sativa HOM05D000416 ORTHO05D000322 4.1e-06 54.3 51 56.9
COL.COLO4_21659 Corchorus olitorius HOM05D000416 ORTHO05D000322 4.1e-06 54.3 38 65.8
MD13G1184800 Malus domestica HOM05D000416 ORTHO05D000322 4.1e-06 54.3 38 68.4
arahy.Tifrunner.gnm1.ann1.G01LXB Arachis hypogaea HOM05D000416 ORTHO05D000322 5.4e-06 53.9 41 68.3
arahy.Tifrunner.gnm1.ann1.LWMA4C Arachis hypogaea HOM05D000416 ORTHO05D000322 5.4e-06 53.9 41 68.3
Ca_21597_v3 Cicer arietinum L. HOM05D000416 ORTHO05D000322 5.4e-06 53.9 38 71.1
Ca_30918_v3 Cicer arietinum L. HOM05D000416 ORTHO05D000322 5.4e-06 53.9 38 71.1
Ciclev10004993m.g Citrus clementina HOM05D000416 ORTHO05D000322 5.4e-06 53.9 38 68.4
Ciclev10004995m.g Citrus clementina HOM05D000416 ORTHO05D000322 5.4e-06 53.9 38 68.4
COL.COLO4_26617 Corchorus olitorius HOM05D000416 ORTHO05D000322 5.4e-06 53.9 38 65.8
Medtr2g022350 Medicago truncatula HOM05D000416 ORTHO05D000322 5.4e-06 53.9 38 71.1
Nn1g02175 Nelumbo nucifera HOM05D000416 ORTHO05D000322 5.4e-06 53.9 38 68.4
Thecc.04G223200 Theobroma cacao HOM05D000416 ORTHO05D000322 5.4e-06 53.9 38 68.4
TPR.G11691 Trifolium pratense HOM05D000416 ORTHO05D000322 5.4e-06 53.9 38 73.7
Atru.chr4.2563 Acer truncatum HOM05D000416 ORTHO05D000322 7.0e-06 53.5 40 62.5
arahy.Tifrunner.gnm1.ann1.AD76PW Arachis hypogaea HOM05D000416 ORTHO05D000322 7.0e-06 53.5 41 65.9
Lj5g0017293 Lotus japonicus HOM05D000416 ORTHO05D000322 7.0e-06 53.5 40 67.5
Medtr4g117090 Medicago truncatula HOM05D000416 ORTHO05D000322 7.0e-06 53.5 40 65.0
Prupe.8G243100 Prunus persica HOM05D000416 ORTHO05D000322 7.0e-06 53.5 38 68.4
TAR633G0534 Trochodendron aralioides HOM05D000416 ORTHO05D000322 7.0e-06 53.5 38 68.4
VMungo1215G2212 Vigna mungo HOM05D000416 ORTHO05D000322 7.0e-06 53.5 38 68.4
Cpa.g.sc52.15 Carica papaya HOM05D000416 ORTHO05D000322 9.2e-06 53.1 42 61.9
Lalb_Chr14g0369701 Lupinus albus HOM05D000416 ORTHO05D000322 9.2e-06 53.1 38 65.8
Manes.15G023900 Manihot esculenta HOM05D000416 ORTHO05D000322 9.2e-06 53.1 38 68.4
TWI73G1054 Tripterygium wilfordii HOM05D000416 ORTHO05D000322 9.2e-06 53.1 38 65.8


User provided reference genes

Program Settings