Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 3.6e-208 728.0 369 100.0
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 7.3e-193 677.2 368 94.8
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 3.9e-186 654.8 370 90.0
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 8.6e-170 600.5 368 82.3
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 7.3e-169 597.4 368 82.1
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 2.9e-165 585.5 374 80.5
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 2.1e-160 569.3 361 82.0
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 1.8e-159 566.2 376 79.5
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 3.1e-159 565.5 356 81.7
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 3.1e-159 565.5 323 87.3
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 1.5e-153 546.6 364 75.5
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 2.1e-152 542.7 377 72.4
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 1.1e-151 540.4 371 75.5
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 2.4e-151 539.3 375 74.4
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 5.3e-151 538.1 378 73.5
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 1.3e-149 533.5 354 75.7
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 1.7e-149 533.1 373 73.7
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 1.7e-149 533.1 362 76.8
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 2.2e-149 532.7 389 72.0
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 2.9e-149 532.3 367 74.9
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 1.6e-147 526.6 356 74.2
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 2.1e-147 526.2 367 74.1
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 7.9e-147 524.2 355 74.4
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 1.8e-146 523.1 361 74.0
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 3.0e-146 522.3 359 75.2
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 3.9e-146 521.9 354 74.3
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 5.1e-146 521.5 358 75.1
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 6.7e-146 521.2 356 74.2
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 1.5e-145 520.0 369 71.8
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 4.3e-145 518.5 363 72.7
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 1.3e-144 516.9 353 74.2
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 2.4e-143 512.7 407 67.6
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 5.3e-143 511.5 356 71.6
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 6.9e-143 511.1 361 72.6
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 2.0e-142 509.6 358 73.5
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 2.6e-142 509.2 386 69.7
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 3.4e-142 508.8 313 81.2
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 3.4e-142 508.8 362 72.1
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 4.5e-142 508.4 362 72.7
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 7.6e-142 507.7 357 72.0
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 3.8e-141 505.4 357 70.9
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 3.8e-141 505.4 367 71.9
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 4.9e-141 505.0 366 72.1
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 1.9e-140 503.1 367 71.7
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 2.7e-139 499.2 362 69.9
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 1.8e-138 496.5 360 69.7
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 2.3e-138 496.1 361 68.7
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 3.0e-138 495.7 352 71.9
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 3.0e-138 495.7 317 77.3
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 6.7e-138 494.6 400 64.0
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 1.1e-137 493.8 352 71.9
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 1.1e-137 493.8 319 78.7
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 1.5e-137 493.4 352 71.9
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 3.3e-137 492.3 312 77.9
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 4.3e-137 491.9 360 71.4
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 5.6e-137 491.5 365 70.4
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 9.6e-137 490.7 376 69.4
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 1.6e-136 490.0 317 76.7
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 1.6e-136 490.0 356 71.6
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 2.8e-136 489.2 360 70.8
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 3.7e-136 488.8 357 69.5
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 3.7e-136 488.8 384 67.7
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 6.2e-136 488.0 352 70.5
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 8.2e-136 487.6 352 70.2
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 1.1e-135 487.3 317 76.3
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 1.4e-135 486.9 396 65.7
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 2.4e-135 486.1 352 70.2
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 3.1e-135 485.7 317 75.7
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 6.9e-135 484.6 352 69.9
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 2.6e-134 482.6 371 67.7
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 4.5e-134 481.9 352 71.6
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 4.5e-134 481.9 365 68.8
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 5.8e-134 481.5 365 67.9
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 7.6e-134 481.1 366 67.8
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 2.2e-133 479.6 344 70.9
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 2.2e-133 479.6 361 68.4
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 3.8e-133 478.8 319 74.0
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 4.9e-133 478.4 351 69.2
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 8.4e-133 477.6 358 68.4
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 1.4e-132 476.9 353 70.3
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 4.2e-132 475.3 368 66.0
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 6.0e-131 471.5 381 65.4
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 3.0e-130 469.2 321 73.2
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 5.1e-130 468.4 317 75.1
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 7.4e-129 464.5 352 67.9
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 7.4e-129 464.5 367 66.8
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 9.7e-129 464.2 321 72.9
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 2.8e-128 462.6 304 77.6
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 3.7e-128 462.2 319 72.7
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 3.7e-128 462.2 319 72.7
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 3.7e-128 462.2 284 80.6
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 1.1e-127 460.7 264 88.3
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 2.4e-127 459.5 293 77.8
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 2.4e-127 459.5 355 68.2
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 5.3e-127 458.4 291 78.4
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 1.2e-126 457.2 316 71.2
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 1.0e-125 454.1 310 73.2
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 1.7e-125 453.4 316 70.9
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 2.5e-124 449.5 426 58.2
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 4.2e-124 448.7 310 72.6
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 4.2e-124 448.7 315 73.0
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 7.9e-123 444.5 348 67.8
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 7.9e-115 417.9 258 80.6
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 1.4e-114 417.2 258 78.3
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 8.2e-104 381.3 304 63.2
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 7.0e-103 378.3 316 60.4
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 5.9e-102 375.2 368 57.1
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 2.5e-100 369.8 261 71.3
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 9.4e-100 367.9 374 55.1
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 1.6e-99 367.1 328 57.0
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 8.0e-99 364.8 301 62.8
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 1.5e-97 360.5 349 57.0
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 4.4e-97 359.0 241 73.9
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 1.3e-96 357.5 368 55.7
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 2.7e-94 349.7 293 65.5
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 5.0e-93 345.5 358 55.0
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 5.9e-86 322.0 195 80.5
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 3.8e-85 319.3 369 48.0
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 2.5e-84 316.6 287 57.8
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 8.9e-82 308.1 273 63.0
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 4.4e-81 305.8 176 88.1
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 7.8e-78 295.0 192 77.1
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 2.8e-75 286.6 191 76.4
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 4.7e-75 285.8 198 74.2
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 1.6e-70 270.8 356 41.0
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 6.6e-69 265.4 198 74.2
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 3.3e-68 263.1 165 83.0
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.7e-61 240.7 201 62.2
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 4.7e-59 232.6 167 68.9
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 1.1e-58 231.5 333 40.5
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 6.4e-56 222.2 166 67.5
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 9.2e-55 218.4 341 39.3
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 7.3e-52 208.8 285 40.0
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 4.0e-50 203.0 172 58.1
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 3.4e-49 199.9 123 75.6
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 7.6e-49 198.7 148 66.2
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 9.9e-49 198.4 258 44.2
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 1.9e-47 194.1 172 61.0
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 2.8e-43 180.3 354 34.5
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.4e-39 167.9 129 66.7
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 3.6e-35 153.3 87 87.4
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 1.4e-34 151.4 119 62.2
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 1.1e-31 141.7 158 51.9
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 7.1e-31 139.0 95 72.6
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 3.9e-29 133.3 320 33.8
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 1.1e-23 115.2 70 78.6
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 8.7e-21 105.5 80 65.0
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 2.0e-17 94.4 71 63.4
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 2.0e-09 67.8 43 72.1


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