Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G015900 Glycine max HOM05D004695 ORTHO05D005372 1.1e-34 149.4 76 100.0
Glyma.07G258100 Glycine max HOM05D004695 ORTHO05D005372 1.4e-29 132.5 94 76.6
Glyma.13G207100 Glycine max HOM05D004695 ORTHO05D005372 1.5e-20 102.4 96 61.5
Glyma.15G105500 Glycine max HOM05D004695 ORTHO05D005372 1.5e-20 102.4 95 63.2
Lalb_Chr15g0087411 Lupinus albus HOM05D004695 ORTHO05D005372 4.4e-20 100.9 92 64.1
Phvul.006G151900 Phaseolus vulgaris HOM05D004695 ORTHO05D005372 1.3e-19 99.4 94 61.7
Lj4g0022767 Lotus japonicus HOM05D004695 ORTHO05D005372 1.1e-18 96.3 91 61.5
VMungo0540G1940 Vigna mungo HOM05D004695 ORTHO05D005372 1.2e-17 92.8 95 58.9
TPR.G912 Trifolium pratense HOM05D004695 ORTHO05D005372 2.7e-17 91.7 89 57.3
Medtr2g022610 Medicago truncatula HOM05D004695 ORTHO05D005372 4.6e-17 90.9 90 58.9
Lalb_Chr18g0056181 Lupinus albus HOM05D004695 ORTHO05D005372 3.9e-16 87.8 92 57.6
Phvul.003G091400 Phaseolus vulgaris HOM05D004695 ORTHO05D005372 8.6e-16 86.7 83 62.7
Ca_00631_v3 Cicer arietinum L. HOM05D004695 ORTHO05D005372 4.3e-15 84.3 94 53.2
Medtr4g131720 Medicago truncatula HOM05D004695 ORTHO05D005372 7.3e-15 83.6 95 62.1
TPR.G36993 Trifolium pratense HOM05D004695 ORTHO05D005372 2.8e-14 81.6 95 58.9
Psat1g182680 Pisum sativum HOM05D004695 ORTHO05D005372 1.1e-13 79.7 90 53.3
Prupe.1G153300 Prunus persica HOM05D004695 ORTHO05D005372 1.4e-13 79.3 99 51.5
arahy.Tifrunner.gnm1.ann1.NGDM9G Arachis hypogaea HOM05D004695 ORTHO05D005372 3.1e-13 78.2 99 52.5
arahy.Tifrunner.gnm1.ann1.P3SWUI Arachis hypogaea HOM05D004695 ORTHO05D005372 3.1e-13 78.2 99 52.5
VMungo1215G1766 Vigna mungo HOM05D004695 ORTHO05D005372 4.4e-12 74.3 89 57.3
QL06p003781 Quercus lobata HOM05D004695 ORTHO05D005372 2.9e-11 71.6 93 48.4
Manes.15G024700 Manihot esculenta HOM05D004695 ORTHO05D005372 8.4e-11 70.1 93 47.3
Ciclev10006235m.g Citrus clementina HOM05D004695 ORTHO05D005372 3.2e-10 68.2 98 46.9
Lj6g0025020 Lotus japonicus HOM05D004695 ORTHO05D005372 7.1e-10 67.0 99 51.5
Manes.03G182700 Manihot esculenta HOM05D004695 ORTHO05D005372 2.7e-09 65.1 90 45.6
Thecc.01G113400 Theobroma cacao HOM05D004695 ORTHO05D005372 2.7e-09 65.1 56 60.7
RcHm_v2.0_Chr4g0417511 Rosa chinensis HOM05D004695 ORTHO05D005372 6.0e-09 63.9 101 42.6
CiPaw.01G161500 Carya illinoinensis HOM05D004695 ORTHO05D005372 2.3e-08 62.0 95 43.2
Duzib264G0758 Durio zibethinus HOM05D004695 ORTHO05D005372 2.3e-08 62.0 98 41.8
Psat4g008520 Pisum sativum HOM05D004695 ORTHO05D005372 3.0e-08 61.6 89 57.3
arahy.Tifrunner.gnm1.ann1.P7T279 Arachis hypogaea HOM05D004695 ORTHO05D005372 6.6e-08 60.5 70 60.0
Thecc.04G224700 Theobroma cacao HOM05D004695 ORTHO05D005372 6.6e-08 60.5 73 50.7
GSVIVG01017906001 Vitis vinifera HOM05D004695 ORTHO05D005372 8.7e-08 60.1 54 59.3
Cpa.g.sc147.16 Carica papaya HOM05D004695 ORTHO05D005372 1.5e-07 59.3 62 53.2
Gorai.003G047400 Gossypium raimondii HOM05D004695 ORTHO05D005372 1.5e-07 59.3 94 40.4
Nn1g02189 Nelumbo nucifera HOM05D004695 ORTHO05D005372 2.5e-07 58.5 79 48.1
arahy.Tifrunner.gnm1.ann1.6BH6U4 Arachis hypogaea HOM05D004695 ORTHO05D005372 3.3e-07 58.2 61 63.9
Aqoxy2G03294 Aquilegia oxysepala HOM05D004695 ORTHO05D005372 5.6e-07 57.4 88 40.9
FvH4_4g14800 Fragaria vesca HOM05D004695 ORTHO05D005372 7.3e-07 57.0 102 39.2
FAN12G3688 Fragaria x ananassa HOM05D004695 ORTHO05D005372 7.3e-07 57.0 102 39.2
Potri.008G204100 Populus trichocarpa HOM05D004695 ORTHO05D005372 7.3e-07 57.0 89 46.1
FAN07G1591 Fragaria x ananassa HOM05D004695 ORTHO05D005372 9.6e-07 56.6 100 40.0
Gohir.A02G135400 Gossypium hirsutum HOM05D004695 ORTHO05D005372 9.6e-07 56.6 94 40.4
Dinv44493 Davidia involucrata HOM05D003236 ORTHO05D003620 1.2e-06 56.2 86 41.9
Duzib147G1031 Durio zibethinus HOM05D004695 ORTHO05D005372 1.2e-06 56.2 101 38.6
MD13G1185600 Malus domestica HOM05D004695 ORTHO05D005372 1.2e-06 56.2 60 58.3
Dinv38408 Davidia involucrata HOM05D004695 ORTHO05D005372 1.6e-06 55.8 73 47.9
Duzib187G0357 Durio zibethinus HOM05D004695 ORTHO05D005372 1.6e-06 55.8 84 42.9
Actinidia23502 Actinidia chinensis HOM05D004695 ORTHO05D005372 3.6e-06 54.7 97 41.2
FAN22G2275 Fragaria x ananassa HOM05D004695 ORTHO05D005372 3.6e-06 54.7 102 38.2
Hma1.2p1_0995F.1_g245790 Hydrangea macrophylla HOM05D004695 ORTHO05D005372 4.7e-06 54.3 83 42.2
Cfa015601 Carpinus fangiana HOM05D004695 ORTHO05D005372 6.2e-06 53.9 71 52.1
COL.COLO4_26631 Corchorus olitorius HOM05D004695 ORTHO05D005372 6.2e-06 53.9 74 45.9


User provided reference genes

Program Settings