Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G014100 Glycine max HOM05D008677 ORTHO05D002434 7.7e-65 250.4 129 100.0
Glyma.07G259800 Glycine max HOM05D008677 ORTHO05D002434 4.2e-39 164.9 132 74.2
Glyma.17G014500 Glycine max HOM05D008677 ORTHO05D002434 7.2e-39 164.1 135 71.1
Glyma.17G014600 Glycine max HOM05D008677 ORTHO05D002434 2.7e-38 162.2 133 68.4
Glyma.17G014200 Glycine max HOM05D008677 ORTHO05D002434 2.3e-37 159.1 136 69.9
Glyma.17G014400 Glycine max HOM05D008677 ORTHO05D002434 1.2e-36 156.8 133 69.2
Glyma.07G259900 Glycine max HOM05D008677 ORTHO05D002434 5.7e-36 154.5 137 68.6
Glyma.07G259700 Glycine max HOM05D008677 ORTHO05D002434 2.2e-35 152.5 135 68.1
VMungo1215G0105 Vigna mungo HOM05D008677 ORTHO05D002434 1.0e-29 133.7 135 64.4
VMungo1215G0276 Vigna mungo HOM05D008677 ORTHO05D002434 1.5e-28 129.8 135 62.2
Phvul.003G078000 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 2.6e-28 129.0 171 52.0
Phvul.003G077900 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 2.2e-27 125.9 129 62.0
Glyma.15G107300 Glycine max HOM05D008677 ORTHO05D002434 9.2e-26 120.6 140 55.7
VMungo1215G2206 Vigna mungo HOM05D008677 ORTHO05D002434 2.0e-25 119.4 132 59.1
Ca_00651_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 1.9e-23 112.8 141 52.5
TPR.G9935 Trifolium pratense HOM05D008677 ORTHO05D002434 9.5e-23 110.5 139 52.5
Medtr2g023010 Medicago truncatula HOM05D008677 ORTHO05D002434 1.2e-22 110.2 138 53.6
VMungo0540G1774 Vigna mungo HOM05D008677 ORTHO05D002434 5.2e-21 104.8 140 48.6
Psat1g181240 Pisum sativum HOM05D008677 ORTHO05D002434 8.9e-21 104.0 138 52.9
Lalb_Chr07g0177261 Lupinus albus HOM05D008677 ORTHO05D002434 4.4e-20 101.7 149 49.0
Lj6g0026915 Lotus japonicus HOM05D008677 ORTHO05D002434 1.3e-19 100.1 139 51.1
Lj4g0005888 Lotus japonicus HOM05D008677 ORTHO05D002434 2.9e-19 99.0 141 48.9
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 1.7e-16 89.7 135 45.2
Lalb_Chr07g0177271 Lupinus albus HOM05D008677 ORTHO05D002434 8.6e-16 87.4 151 48.3
Ca_00640_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 7.3e-15 84.3 110 52.7
Phvul.006G150100 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 7.3e-15 84.3 140 44.3
arahy.Tifrunner.gnm1.ann1.PG586I Arachis hypogaea HOM05D008677 ORTHO05D002434 1.2e-14 83.6 153 45.8
Medtr4g132000 Medicago truncatula HOM05D008677 ORTHO05D002434 8.0e-14 80.9 139 41.0
Medtr4g132010 Medicago truncatula HOM05D008677 ORTHO05D002434 1.4e-13 80.1 150 42.7
arahy.Tifrunner.gnm1.ann1.8P9XRD Arachis hypogaea HOM05D008677 ORTHO05D002434 3.1e-13 79.0 142 45.1
Ca_21088_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 6.8e-13 77.8 160 41.2
Ca_30196_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 6.8e-13 77.8 160 41.2
Psat4g006760 Pisum sativum HOM05D008677 ORTHO05D002434 2.6e-12 75.9 149 42.3
Psat4g006720 Pisum sativum HOM05D008677 ORTHO05D002434 5.8e-12 74.7 147 41.5
Glyma.13G205200 Glycine max HOM05D008677 ORTHO05D002434 1.3e-11 73.6 85 55.3
Psat4g006800 Pisum sativum HOM05D008677 ORTHO05D002434 1.3e-11 73.6 146 41.1
Psat4g007000 Pisum sativum HOM05D008677 ORTHO05D002434 2.9e-11 72.4 142 39.4
Psat4g006840 Pisum sativum HOM05D008677 ORTHO05D002434 3.7e-11 72.0 141 42.6
Lalb_Chr18g0056321 Lupinus albus HOM05D008677 ORTHO05D002434 6.4e-11 71.2 135 39.3
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 4.1e-10 68.6 142 37.3
TPR.G36987 Trifolium pratense HOM05D008677 ORTHO05D002434 5.4e-10 68.2 157 40.1
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 7.8e-09 64.3 134 37.3
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 1.0e-08 63.9 133 35.3
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.7e-08 63.2 131 36.6
TPR.G37017 Trifolium pratense HOM05D008677 ORTHO05D002434 1.7e-08 63.2 150 38.7
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 3.0e-08 62.4 133 34.6
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 5.0e-08 61.6 133 34.6
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 6.6e-08 61.2 130 36.2
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.1e-07 60.5 133 33.1
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.9e-07 59.7 135 37.0
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 1.9e-07 59.7 139 33.8
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 2.5e-07 59.3 143 36.4
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 4.3e-07 58.5 147 30.6
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 4.3e-07 58.5 138 31.9
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 4.3e-07 58.5 138 31.9
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 4.3e-07 58.5 126 31.7
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 4.3e-07 58.5 133 36.1
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 5.6e-07 58.2 138 31.9
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 5.6e-07 58.2 134 32.8
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 7.3e-07 57.8 141 30.5
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 7.3e-07 57.8 133 35.3
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 1.2e-06 57.0 131 35.1
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 1.2e-06 57.0 135 36.3
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 1.2e-06 57.0 140 33.6
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 1.6e-06 56.6 127 30.7
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 1.6e-06 56.6 131 31.3
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 2.1e-06 56.2 132 34.8
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 2.8e-06 55.8 127 34.6
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 3.6e-06 55.5 153 34.6
Lj4g0000389 Lotus japonicus HOM05D008677 ORTHO05D002434 3.6e-06 55.5 126 36.5
Eucgr.F03465 Eucalyptus grandis HOM05D003074 ORTHO05D002434 4.7e-06 55.1 134 32.8
Potri.011G003100 Populus trichocarpa HOM05D003074 ORTHO05D002434 4.7e-06 55.1 134 31.3
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 8.1e-06 54.3 140 32.1


User provided reference genes

Program Settings