Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 2.5e-161 572.0 279 100.0
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 4.0e-151 538.1 279 95.0
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 8.3e-149 530.4 279 92.8
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 4.6e-147 524.6 279 92.1
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 1.9e-124 449.5 287 81.9
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 4.1e-124 448.4 284 82.7
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 9.2e-124 447.2 284 82.4
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 1.5e-118 429.9 293 78.8
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 1.6e-115 419.9 284 76.8
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 2.1e-115 419.5 282 77.0
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 1.9e-113 412.9 283 77.0
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 6.4e-109 397.9 281 71.5
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 6.4e-109 397.9 280 71.1
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 2.8e-104 382.5 281 69.0
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 6.2e-104 381.3 284 70.1
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 7.6e-102 374.4 286 69.9
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 1.3e-101 373.6 278 68.3
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 2.9e-101 372.5 289 66.8
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 6.4e-101 371.3 281 70.1
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 1.1e-100 370.5 228 78.9
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 2.4e-100 369.4 244 76.6
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 3.2e-100 369.0 283 68.6
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 1.2e-99 367.1 283 68.2
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 3.5e-99 365.5 296 66.2
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 4.6e-99 365.2 298 66.1
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 1.8e-98 363.2 280 68.2
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 6.7e-98 361.3 311 64.6
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 8.7e-98 360.9 289 66.4
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 2.5e-97 359.4 251 71.7
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 5.6e-97 358.2 279 67.4
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 7.4e-97 357.8 252 73.0
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 9.6e-97 357.5 298 65.1
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 9.6e-97 357.5 280 65.7
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 1.3e-96 357.1 280 66.1
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 2.8e-96 355.9 279 65.2
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 6.2e-96 354.8 281 64.8
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 8.1e-96 354.4 223 78.0
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 8.1e-96 354.4 282 67.7
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 1.1e-95 354.0 283 65.4
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 1.1e-95 354.0 280 66.8
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.1e-95 354.0 227 78.9
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 1.8e-95 353.2 280 66.1
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 2.4e-95 352.8 227 78.4
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 2.4e-95 352.8 286 65.4
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 4.0e-95 352.1 223 79.4
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 4.0e-95 352.1 281 65.8
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 6.9e-95 351.3 281 64.8
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 9.0e-95 350.9 205 81.0
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 1.5e-94 350.1 281 64.8
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 2.6e-94 349.4 223 77.6
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 2.6e-94 349.4 283 66.4
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 2.6e-94 349.4 205 83.9
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 7.6e-94 347.8 277 64.3
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.3e-93 347.1 282 64.5
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 1.7e-93 346.7 277 66.1
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 2.2e-93 346.3 273 67.8
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 3.8e-93 345.5 190 89.5
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 4.9e-93 345.1 279 63.8
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 2.5e-92 342.8 251 70.5
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 3.2e-92 342.4 251 66.9
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 1.8e-90 336.7 284 63.7
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 2.3e-90 336.3 282 64.2
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 3.0e-90 335.9 299 59.2
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 3.9e-90 335.5 225 76.4
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 5.1e-90 335.1 281 64.1
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 1.5e-89 333.6 236 73.3
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 1.9e-89 333.2 284 63.4
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 1.9e-89 333.2 280 64.3
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 1.9e-89 333.2 274 63.9
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 4.3e-89 332.0 282 62.1
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 2.1e-88 329.7 292 62.0
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 2.8e-88 329.3 216 74.1
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 5.3e-87 325.1 229 71.6
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 6.9e-87 324.7 228 70.6
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 1.2e-86 323.9 205 74.6
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 1.7e-85 320.1 184 82.6
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 1.4e-84 317.0 243 67.1
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 1.4e-84 317.0 280 61.4
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 1.2e-83 313.9 243 65.8
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 3.6e-83 312.4 214 73.8
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 6.1e-83 311.6 210 74.8
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 7.9e-83 311.2 192 77.6
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 1.8e-82 310.1 290 58.6
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 1.8e-82 310.1 231 68.0
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 2.3e-82 309.7 243 66.3
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 3.3e-81 305.8 189 79.4
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 3.3e-81 305.8 189 79.4
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 3.3e-81 305.8 189 79.4
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 5.7e-81 305.1 205 72.2
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 7.4e-81 304.7 231 67.1
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 7.4e-81 304.7 189 78.8
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 9.7e-81 304.3 192 76.6
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 7.7e-78 294.7 281 59.4
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 5.5e-76 288.5 187 74.9
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 1.6e-75 287.0 195 69.2
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 5.7e-73 278.5 277 56.7
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 9.7e-73 277.7 277 56.7
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 2.0e-70 270.0 166 78.9
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 3.4e-70 269.2 169 75.7
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 5.3e-63 245.4 187 61.5
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 2.1e-59 233.4 187 58.3
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 5.5e-52 208.8 121 86.0
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 1.2e-49 201.1 130 73.8
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 2.8e-48 196.4 180 53.9
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 6.5e-45 185.3 102 85.3
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 4.5e-38 162.5 93 86.0
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 5.9e-30 135.6 81 80.2
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 8.9e-26 121.7 157 45.9
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 1.7e-24 117.5 154 44.2
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 2.9e-24 116.7 93 64.5
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 7.1e-15 85.5 97 41.2
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 4.6e-14 82.8 87 49.4
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 8.9e-10 68.6 174 29.9
Nn1g08227 Nelumbo nucifera HOM05D006957 ORTHO05D008647 1.3e-08 64.7 121 41.3
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 1.1e-07 61.6 34 88.2


User provided reference genes

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