Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.17G006900 Glycine max HOM05D005871 ORTHO05D003654 4.5e-107 391.3 211 100.0
Lalb_Chr18g0057151 Lupinus albus HOM05D005871 ORTHO05D003654 1.7e-37 160.2 232 48.7
VMungo0540G0718 Vigna mungo HOM05D005871 ORTHO05D003654 2.7e-35 152.9 222 50.5
Phvul.006G140600 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 4.6e-35 152.1 242 50.4
TPR.G10004 Trifolium pratense HOM05D005871 ORTHO05D003654 5.7e-33 145.2 222 45.5
Glyma.09G012800 Glycine max HOM05D005871 ORTHO05D003654 2.8e-32 142.9 224 48.7
Medtr2g026565 Medicago truncatula HOM05D005871 ORTHO05D003654 1.4e-31 140.6 228 47.8
arahy.Tifrunner.gnm1.ann1.5G685G Arachis hypogaea HOM05D005871 ORTHO05D003654 1.7e-29 133.7 210 44.8
Phvul.003G085700 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 1.1e-28 131.0 210 49.5
Lj6g0012820 Lotus japonicus HOM05D005871 ORTHO05D003654 5.5e-28 128.6 143 54.5
QL05p068166 Quercus lobata HOM05D005871 ORTHO05D003654 7.9e-27 124.8 202 45.5
Psat1g173400 Pisum sativum HOM05D005871 ORTHO05D003654 7.4e-25 118.2 209 44.5
Thecc.06G238200 Theobroma cacao HOM05D005871 ORTHO05D003654 1.2e-22 110.9 225 39.6
CiPaw.09G107300 Carya illinoinensis HOM05D005871 ORTHO05D003654 3.2e-20 102.8 228 39.5
Gorai.010G189400 Gossypium raimondii HOM05D005871 ORTHO05D003654 4.7e-19 99.0 234 37.2
Potri.016G007400 Populus trichocarpa HOM05D005871 ORTHO05D003654 8.0e-19 98.2 201 39.8
VMungo1215G0873 Vigna mungo HOM05D005871 ORTHO05D003654 6.3e-16 88.6 147 47.6
Cfa000051 Carpinus fangiana HOM05D005871 ORTHO05D003654 1.1e-15 87.8 217 38.7
COL.COLO4_31921 Corchorus olitorius HOM05D005871 ORTHO05D003654 3.1e-15 86.3 215 37.2
Gohir.A06G155900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 9.1e-15 84.7 239 33.9
Glyma.15G117700 Glycine max HOM05D005871 ORTHO05D003654 1.2e-14 84.3 239 32.6
Hma1.2p1_0657F.1_g196840 Hydrangea macrophylla HOM05D005871 ORTHO05D003654 1.6e-14 84.0 242 31.8
Actinidia02292 Actinidia chinensis HOM05D005871 ORTHO05D003654 5.9e-14 82.0 219 34.2
Gohir.D06G162300 Gossypium hirsutum HOM05D005871 ORTHO05D003654 7.7e-14 81.6 207 35.3
MD00G1057200 Malus domestica HOM05D005871 ORTHO05D003654 1.3e-13 80.9 232 35.3
Haze_07001 Corylus avellana HOM05D005871 ORTHO05D003654 2.2e-13 80.1 224 37.9
TWI38G1492 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 2.2e-13 80.1 213 40.4
Ah.09g234010 Amaranthus hybridus HOM05D005871 ORTHO05D003654 6.5e-13 78.6 213 31.9
Eucgr.L00169 Eucalyptus grandis HOM05D005871 ORTHO05D003654 6.5e-13 78.6 263 30.0
Cpa.g.sc1092.4 Carica papaya HOM05D005871 ORTHO05D003654 4.2e-12 75.9 247 32.0
Ciclev10016570m.g Citrus clementina HOM05D005871 ORTHO05D003654 7.2e-12 75.1 241 33.2
Sabra16G0012200 Salix brachista HOM05D005871 ORTHO05D003654 7.2e-12 75.1 195 36.9
Cc09_g00530 Coffea canephora HOM05D005871 ORTHO05D003654 9.4e-12 74.7 229 32.3
PGR004G2708 Punica granatum HOM05D005871 ORTHO05D003654 2.7e-11 73.2 249 33.7
Phvul.006G056300 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 4.7e-11 72.4 228 30.7
Manes.09G078209 Manihot esculenta HOM05D005871 ORTHO05D003654 1.4e-10 70.9 197 35.5
Manes.09G078218 Manihot esculenta HOM05D005871 ORTHO05D003654 1.4e-10 70.9 225 32.0
TAR626G0615 Trochodendron aralioides HOM05D005871 ORTHO05D003654 1.8e-10 70.5 205 31.7
CANSAT56G4186 Cannabis sativa HOM05D005871 ORTHO05D003654 3.0e-10 69.7 228 29.8
Glyma.08G328600 Glycine max HOM05D005871 ORTHO05D003654 3.0e-10 69.7 244 29.9
SalBow1G1270 Salvia bowleyana HOM05D005871 ORTHO05D003654 1.2e-09 67.8 213 34.7
Ca_00750_v3 Cicer arietinum L. HOM05D038610 ORTHO05D003654 3.4e-09 66.2 124 43.5
Ca_29731_v3 Cicer arietinum L. HOM05D038610 ORTHO05D003654 3.4e-09 66.2 124 43.5
Haze_09808 Corylus avellana HOM05D005871 ORTHO05D003654 4.4e-09 65.9 208 34.1
Manes.03G140300 Manihot esculenta HOM05D005871 ORTHO05D003654 4.4e-09 65.9 245 28.6
Glyma.18G078200 Glycine max HOM05D005871 ORTHO05D003654 5.7e-09 65.5 247 29.1
MD03G1184900 Malus domestica HOM05D005871 ORTHO05D003654 2.2e-08 63.5 227 33.0
Prupe.4G241600 Prunus persica HOM05D005871 ORTHO05D003654 3.7e-08 62.8 216 31.9
CiPaw.12G137100 Carya illinoinensis HOM05D005871 ORTHO05D003654 4.8e-08 62.4 213 31.9
Cfa020208 Carpinus fangiana HOM05D005871 ORTHO05D003654 6.3e-08 62.0 208 32.7
TWI38G0819 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 1.4e-07 60.8 221 30.3
Nn1g03208 Nelumbo nucifera HOM05D005871 ORTHO05D003654 3.1e-07 59.7 228 32.0
Gohir.D08G035400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 7.0e-07 58.5 228 31.1
Nn1g07488 Nelumbo nucifera HOM05D005871 ORTHO05D003654 7.0e-07 58.5 207 30.9
Lj6g0021132 Lotus japonicus HOM05D005871 ORTHO05D003654 2.0e-06 57.0 238 30.3
Prupe.4G006100 Prunus persica HOM05D005871 ORTHO05D003654 2.0e-06 57.0 100 43.0
Gorai.004G033400 Gossypium raimondii HOM05D005871 ORTHO05D003654 2.7e-06 56.6 228 31.1
Phvul.008G278200 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 2.7e-06 56.6 212 25.9
Sed0004181 Sechium edule HOM05D005871 ORTHO05D003654 2.7e-06 56.6 205 35.1
Psat0s4683g0040 Pisum sativum HOM05D005871 ORTHO05D003654 4.5e-06 55.8 236 27.5
CsaV3_7G015020 Cucumis sativus L. HOM05D005871 ORTHO05D003654 5.9e-06 55.5 212 28.3
Sed0002299 Sechium edule HOM05D005871 ORTHO05D003654 7.7e-06 55.1 196 32.7


User provided reference genes

Program Settings