Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G209900 Glycine max HOM05D007806 ORTHO05D009818 3.8e-237 824.3 386 100.0
Phvul.004G135900 Phaseolus vulgaris HOM05D007806 ORTHO05D009818 2.6e-217 758.4 386 92.2
VMungo0464G0928 Vigna mungo HOM05D007806 ORTHO05D009818 9.2e-215 750.0 429 83.0
Lalb_Chr22g0354101 Lupinus albus HOM05D007806 ORTHO05D009818 3.5e-198 694.9 390 82.8
Lj2g0014387 Lotus japonicus HOM05D007806 ORTHO05D009818 1.1e-196 689.9 381 84.8
Medtr6g069050 Medicago truncatula HOM05D007806 ORTHO05D009818 8.7e-189 663.7 388 80.4
Psat1g118160 Pisum sativum HOM05D007806 ORTHO05D009818 2.8e-187 658.7 388 80.2
Ca_25289_v3 Cicer arietinum L. HOM05D007806 ORTHO05D009818 3.4e-185 651.7 384 80.5
arahy.Tifrunner.gnm1.ann1.T8W9V5 Arachis hypogaea HOM05D007806 ORTHO05D009818 3.0e-181 638.6 389 78.4
QL10p035646 Quercus lobata HOM05D007806 ORTHO05D009818 1.5e-169 599.7 380 72.9
Cfa017816 Carpinus fangiana HOM05D007806 ORTHO05D009818 1.0e-165 587.0 380 73.9
RcHm_v2.0_Chr7g0176861 Rosa chinensis HOM05D007806 ORTHO05D009818 1.3e-163 580.1 380 70.8
Haze_18394 Corylus avellana HOM05D007806 ORTHO05D009818 1.7e-160 569.7 418 67.2
FAN08G1708 Fragaria x ananassa HOM05D007806 ORTHO05D009818 1.7e-160 569.7 380 69.2
GSVIVG01024230001 Vitis vinifera HOM05D007806 ORTHO05D009818 9.4e-159 563.9 379 69.4
FAN13G2940 Fragaria x ananassa HOM05D007806 ORTHO05D009818 2.1e-158 562.8 373 69.7
MD06G1241600 Malus domestica HOM05D007806 ORTHO05D009818 2.3e-157 559.3 380 67.9
Prupe.5G246200 Prunus persica HOM05D007806 ORTHO05D009818 3.0e-157 558.9 380 68.9
PGR044G0970 Punica granatum HOM05D007806 ORTHO05D009818 7.4e-156 554.3 339 74.0
Manes.01G159900 Manihot esculenta HOM05D007806 ORTHO05D009818 2.0e-153 546.2 374 69.0
Cpa.g.sc829.2 Carica papaya HOM05D007806 ORTHO05D009818 1.3e-152 543.5 382 67.5
Sed0012569 Sechium edule HOM05D007806 ORTHO05D009818 2.9e-152 542.3 383 65.3
Oeu034419.1 Olea europaea HOM05D007806 ORTHO05D009818 2.5e-151 539.3 337 71.8
CiPaw.16G075900 Carya illinoinensis HOM05D007806 ORTHO05D009818 7.2e-151 537.7 305 78.0
ClCG01G014670 Citrullus lanatus HOM05D007806 ORTHO05D009818 9.4e-151 537.3 351 68.7
Nn3g18521 Nelumbo nucifera HOM05D007806 ORTHO05D009818 4.7e-150 535.0 316 75.3
Gorai.008G293400 Gossypium raimondii HOM05D007806 ORTHO05D009818 1.0e-149 533.9 370 68.1
Peaxi162Scf00171g00027 Petunia axillaris HOM05D007806 ORTHO05D009818 1.0e-149 533.9 377 65.5
MSTRG.4314 Avicennia marina HOM05D007806 ORTHO05D009818 4.4e-148 528.5 338 69.8
DCAR_011398 Daucus carota HOM05D007806 ORTHO05D009818 6.3e-147 524.6 335 70.4
Duzib084G0683 Durio zibethinus HOM05D007806 ORTHO05D009818 1.4e-146 523.5 370 66.8
PGSC0003DMG400015208 Solanum tuberosum HOM05D007806 ORTHO05D009818 5.3e-146 521.5 379 63.1
Nitab4.5_0004170g0010 Nicotiana tabacum HOM05D007806 ORTHO05D009818 2.0e-145 519.6 345 69.3
Potri.017G154900 Populus trichocarpa HOM05D007806 ORTHO05D009818 3.5e-145 518.8 384 63.8
CAN.G861.15 Capsicum annuum HOM05D007806 ORTHO05D009818 1.0e-144 517.3 362 65.7
Migut.C00455 Erythranthe guttata HOM05D007806 ORTHO05D009818 1.7e-144 516.5 338 68.9
Sopen03g029810 Solanum pennellii HOM05D007806 ORTHO05D009818 6.5e-144 514.6 379 62.5
Aqoxy3G04345 Aquilegia oxysepala HOM05D007806 ORTHO05D009818 8.5e-144 514.2 380 64.7
Solyc03g019810.3 Solanum lycopersicum HOM05D007806 ORTHO05D009818 1.5e-143 513.5 364 64.3
PSO063G6352 Papaver somniferum HOM05D007806 ORTHO05D009818 1.9e-143 513.1 386 63.0
PSO782G4489 Papaver somniferum HOM05D007806 ORTHO05D009818 9.4e-143 510.8 382 63.6
TAR629G0023 Trochodendron aralioides HOM05D007806 ORTHO05D009818 9.4e-143 510.8 302 75.2
Nitab4.5_0009307g0070 Nicotiana tabacum HOM05D007806 ORTHO05D009818 2.7e-142 509.2 396 61.4
MELO3C002184.2 Cucumis melo HOM05D007806 ORTHO05D009818 4.0e-141 505.4 432 57.4
Sc18g0002780 Simmondsia chinensis HOM05D007806 ORTHO05D009818 6.7e-141 504.6 340 68.2
SalBow2G1738 Salvia bowleyana HOM05D007806 ORTHO05D009818 7.5e-140 501.1 339 64.9
EL10Ac8g18997 Beta vulgaris HOM05D007806 ORTHO05D009818 4.1e-138 495.4 379 61.2
MBI06_g39055_MAGBIO Magnolia biondii HOM05D007806 ORTHO05D009818 6.5e-136 488.0 302 73.5
Gohir.A12G272200 Gossypium hirsutum HOM05D007806 ORTHO05D009818 1.9e-135 486.5 371 64.4
arahy.Tifrunner.gnm1.ann1.L8FXMQ Arachis hypogaea HOM05D007806 ORTHO05D009818 5.5e-135 485.0 316 74.7
Cc00_g01520 Coffea canephora HOM05D007806 ORTHO05D009818 1.5e-132 476.9 273 76.9
AUR62028303 Chenopodium quinoa HOM05D007806 ORTHO05D009818 2.0e-132 476.5 357 61.3
ATR0124G050 Amborella trichopoda HOM05D007806 ORTHO05D009818 1.3e-131 473.8 373 59.2
FAN04G0377 Fragaria x ananassa HOM05D007806 ORTHO05D009818 2.7e-129 466.1 329 67.8
CsaV3_1G007660 Cucumis sativus L. HOM05D007806 ORTHO05D009818 7.2e-127 458.0 345 62.3
Gohir.D12G273000 Gossypium hirsutum HOM05D007806 ORTHO05D009818 1.4e-125 453.8 323 68.4
Zm00001eb044870 Zea mays HOM05D007806 ORTHO05D009818 1.8e-125 453.4 321 65.7
Thecc.03G069700 Theobroma cacao HOM05D007806 ORTHO05D009818 8.9e-125 451.1 323 67.8
Os10g0492800 Oryza sativa ssp. japonica HOM05D007806 ORTHO05D009818 2.0e-124 449.9 325 63.4
FAN18G2497 Fragaria x ananassa HOM05D007806 ORTHO05D009818 3.4e-124 449.1 364 61.5
Dinv11740 Davidia involucrata HOM05D007806 ORTHO05D009818 5.7e-124 448.4 371 61.5
Zm00001eb221100 Zea mays HOM05D007806 ORTHO05D009818 2.2e-123 446.4 321 64.5
AUR62025297 Chenopodium quinoa HOM05D007806 ORTHO05D009818 9.2e-122 441.0 366 57.1
Ciclev10021108m.g Citrus clementina HOM05D007806 ORTHO05D009818 3.3e-119 432.6 383 58.0
Sabra17G0126600 Salix brachista HOM05D007806 ORTHO05D009818 2.1e-118 429.9 387 56.6
Lj5A169T96 Lonicera japonica HOM05D007806 ORTHO05D009818 1.4e-117 427.2 312 66.7
Mapoly0132s0022 Marchantia polymorpha HOM05D007806 ORTHO05D009818 2.0e-108 396.7 325 53.8
AagrBONN_evm.TU.Sc2ySwM_228.2978 Anthoceros agrestis HOM05D007806 ORTHO05D009818 4.4e-108 395.6 337 54.6
Ah.14g084760 Amaranthus hybridus HOM05D007806 ORTHO05D009818 6.6e-104 381.7 242 70.2
Pp3c4_4360 Physcomitrium patens HOM05D007806 ORTHO05D009818 5.2e-101 372.1 322 54.7
SMO358G0653 Selaginella moellendorffii HOM05D007806 ORTHO05D009818 6.4e-99 365.2 317 53.3
TPR.G13520 Trifolium pratense HOM05D007806 ORTHO05D009818 2.2e-83 313.5 149 91.9
TPR.G35264 Trifolium pratense HOM05D007806 ORTHO05D009818 2.7e-81 306.6 197 77.2
MCO09G069 Micromonas commoda HOM05D007806 ORTHO05D009818 1.8e-77 293.9 342 43.6
PRCOL_00005749 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 2.3e-64 250.4 366 37.4
COL.COLO4_22320 Corchorus olitorius HOM05D007806 ORTHO05D009818 6.9e-53 212.2 188 56.9
SEGI_35085 Sequoiadendron giganteum HOM05D007806 ORTHO05D009818 1.0e-48 198.4 137 63.5
arahy.Tifrunner.gnm1.ann1.XB21YC Arachis hypogaea HOM05D007806 ORTHO05D009818 1.5e-47 194.5 137 65.0
Hund08555 Selenicereus undatus HOM05D007806 ORTHO05D009818 2.2e-46 190.7 129 65.1
TWI81G0807 Tripterygium wilfordii HOM05D007806 ORTHO05D009818 2.1e-41 174.1 160 55.0
PRCOL_00003744 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 7.4e-31 139.0 248 35.1
Cre07.g339450 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 5.0e-27 126.3 303 28.4
Atru.chr9.53 Acer truncatum HOM05D007806 ORTHO05D009818 3.6e-25 120.2 80 68.8
Atru.chr9.50 Acer truncatum HOM05D007806 ORTHO05D009818 7.5e-23 112.5 61 82.0
Cre06.g271188 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 2.1e-17 94.4 182 35.2
arahy.Tifrunner.gnm1.ann1.GAXP8C Arachis hypogaea HOM05D007806 ORTHO05D009818 1.1e-10 72.0 44 72.7
GSVIVG01024233001 Vitis vinifera HOM05D000001 ORTHO05D000003 1.2e-07 62.0 44 70.5
Atru.chr9.51 Acer truncatum HOM05D007806 ORTHO05D009818 2.0e-07 61.2 41 61.0


User provided reference genes

Program Settings