Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G192000 Glycine max HOM05D004189 ORTHO05D004092 1.5e-84 316.2 166 100.0
Glyma.16G192200 Glycine max HOM05D004189 ORTHO05D004092 1.8e-82 309.3 166 98.2
Glyma.16G183700 Glycine max HOM05D004189 ORTHO05D004092 8.9e-82 307.0 166 97.0
Glyma.16G192732 Glycine max HOM05D004189 ORTHO05D004092 2.6e-81 305.4 166 96.4
Glyma.16G189900 Glycine max HOM05D004189 ORTHO05D004092 7.5e-81 303.9 166 97.0
Glyma.16G193200 Glycine max HOM05D004189 ORTHO05D004092 1.3e-80 303.1 166 96.4
Glyma.09G139600 Glycine max HOM05D004189 ORTHO05D004092 1.4e-63 246.5 166 80.7
Phvul.004G117100 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 6.9e-50 201.1 170 69.4
Lj2g0010006 Lotus japonicus HOM05D004189 ORTHO05D004092 1.2e-33 147.1 167 56.3
Lalb_Chr19g0130831 Lupinus albus HOM05D004189 ORTHO05D004092 1.0e-32 144.1 168 56.5
Medtr6g045273 Medicago truncatula HOM05D004189 ORTHO05D004092 1.2e-30 137.1 171 55.6
arahy.Tifrunner.gnm1.ann1.E2ZRS1 Arachis hypogaea HOM05D004189 ORTHO05D004092 1.8e-26 123.2 167 50.3
Glyma.16G193050 Glycine max HOM05D004189 ORTHO05D004092 3.1e-26 122.5 64 96.9
Ciclev10004574m.g Citrus clementina HOM05D004189 ORTHO05D004092 1.2e-25 120.6 167 47.3
arahy.Tifrunner.gnm1.ann1.EQ3RBX Arachis hypogaea HOM05D004189 ORTHO05D004092 4.5e-25 118.6 174 47.1
Psat0s2227g0040 Pisum sativum HOM05D004189 ORTHO05D004092 4.5e-25 118.6 173 48.0
DCAR_018199 Daucus carota HOM05D004189 ORTHO05D004092 6.1e-22 108.2 170 44.1
Cfa008320 Carpinus fangiana HOM05D004189 ORTHO05D004092 3.9e-21 105.5 160 43.8
TPR.G10757 Trifolium pratense HOM05D004189 ORTHO05D004092 3.3e-20 102.4 178 44.4
Gorai.008G277500 Gossypium raimondii HOM05D004189 ORTHO05D004092 5.7e-20 101.7 165 45.5
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 7.4e-20 101.3 166 44.6
Gohir.D12G259100 Gossypium hirsutum HOM05D004189 ORTHO05D004092 1.3e-19 100.5 165 44.8
Gohir.A12G257800 Gossypium hirsutum HOM05D004189 ORTHO05D004092 2.8e-19 99.4 169 45.0
Manes.06G147200 Manihot esculenta HOM05D004189 ORTHO05D004092 2.8e-19 99.4 164 45.1
Thecc.03G176700 Theobroma cacao HOM05D004189 ORTHO05D004092 1.8e-18 96.7 163 43.6
TWI23G0464 Tripterygium wilfordii HOM05D004189 ORTHO05D004092 4.1e-18 95.5 133 46.6
VMungo0720G0841 Vigna mungo HOM05D004189 ORTHO05D004092 5.3e-18 95.1 148 45.3
Eucgr.A02790 Eucalyptus grandis HOM05D004189 ORTHO05D004092 9.0e-18 94.4 162 38.9
Sabra15G0153700 Salix brachista HOM05D004189 ORTHO05D004092 1.2e-17 94.0 166 43.4
QL09p014207 Quercus lobata HOM05D004189 ORTHO05D004092 1.5e-17 93.6 171 43.9
Duzib205G0656 Durio zibethinus HOM05D004189 ORTHO05D004092 2.6e-17 92.8 165 42.4
Aqoxy7G00356 Aquilegia oxysepala HOM05D004189 ORTHO05D004092 3.4e-17 92.4 188 39.4
Ca_25745_v3 Cicer arietinum L. HOM05D004189 ORTHO05D004092 3.4e-17 92.4 133 45.1
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 3.4e-17 92.4 175 43.4
QL09p014192 Quercus lobata HOM05D004189 ORTHO05D004092 7.7e-17 91.3 176 40.9
arahy.Tifrunner.gnm1.ann1.06RI6S Arachis hypogaea HOM05D004189 ORTHO05D004092 2.2e-16 89.7 163 39.3
Prupe.2G294400 Prunus persica HOM05D004189 ORTHO05D004092 2.9e-16 89.4 161 44.1
Glyma.20G158500 Glycine max HOM05D004189 ORTHO05D004092 5.0e-16 88.6 152 42.1
TAR374G0772 Trochodendron aralioides HOM05D004189 ORTHO05D004092 5.0e-16 88.6 159 41.5
Phvul.007G069800 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 8.5e-16 87.8 157 41.4
arahy.Tifrunner.gnm1.ann1.UM41MD Arachis hypogaea HOM05D004189 ORTHO05D004092 1.1e-15 87.4 105 55.2
arahy.Tifrunner.gnm1.ann1.4R9DEN Arachis hypogaea HOM05D001888 ORTHO05D001842 2.5e-15 86.3 148 39.9
PGR042G0303 Punica granatum HOM05D004189 ORTHO05D004092 2.5e-15 86.3 162 42.6
Medtr1g100623 Medicago truncatula HOM05D004189 ORTHO05D004092 7.2e-15 84.7 153 37.3
Glyma.10G236000 Glycine max HOM05D004189 ORTHO05D004092 9.4e-15 84.3 158 38.6
Lj5g0019959 Lotus japonicus HOM05D004189 ORTHO05D004092 1.2e-14 84.0 168 38.7
Actinidia34113 Actinidia chinensis HOM05D004189 ORTHO05D004092 4.6e-14 82.0 169 36.7
AUR62021191 Chenopodium quinoa HOM05D004189 ORTHO05D004092 7.9e-14 81.3 159 39.0
Lalb_Chr21g0305031 Lupinus albus HOM05D004189 ORTHO05D004092 1.0e-13 80.9 153 40.5
Potri.015G143950 Populus trichocarpa HOM05D004189 ORTHO05D004092 1.4e-13 80.5 169 41.4
TPR.G14322 Trifolium pratense HOM05D004189 ORTHO05D004092 1.8e-13 80.1 147 41.5
MD01G1201000 Malus domestica HOM05D004189 ORTHO05D004092 2.3e-13 79.7 169 39.6
vmacro06681 Vaccinium macrocarpon HOM05D004189 ORTHO05D004092 3.9e-13 79.0 167 37.1
AUR62015982 Chenopodium quinoa HOM05D004189 ORTHO05D004092 6.7e-13 78.2 166 38.0
CAN.G490.32 Capsicum annuum HOM05D004189 ORTHO05D004092 8.8e-13 77.8 148 36.5
PSO782G0005 Papaver somniferum HOM05D004189 ORTHO05D004092 8.8e-13 77.8 169 36.7
Solyc03g025810.4 Solanum lycopersicum HOM05D004189 ORTHO05D004092 1.1e-12 77.4 143 39.2
Ah.07g207200 Amaranthus hybridus HOM05D032681 ORTHO05D004092 3.3e-12 75.9 154 39.0
Nitab4.5_0000716g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 3.3e-12 75.9 149 37.6
Medtr1g100627 Medicago truncatula HOM05D004189 ORTHO05D004092 4.3e-12 75.5 154 38.3
Rhsim03G0180900 Rhododendron simsii HOM05D004189 ORTHO05D004092 4.3e-12 75.5 171 35.7
EL10Ac3g05642 Beta vulgaris HOM05D004189 ORTHO05D004092 7.4e-12 74.7 127 41.7
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 9.7e-12 74.3 136 39.7
PSO478G0985 Papaver somniferum HOM05D004189 ORTHO05D004092 9.7e-12 74.3 164 36.0
Psat6g199400 Pisum sativum HOM05D004189 ORTHO05D004092 9.7e-12 74.3 134 35.8
Sc19g0001510 Simmondsia chinensis HOM05D004189 ORTHO05D004092 9.7e-12 74.3 142 38.0
Sopen03g004620 Solanum pennellii HOM05D004189 ORTHO05D004092 9.7e-12 74.3 143 37.8
RcHm_v2.0_Chr1g0377291 Rosa chinensis HOM05D013146 ORTHO05D004092 2.8e-11 72.8 162 37.0
PGSC0003DMG400014293 Solanum tuberosum HOM05D004189 ORTHO05D004092 2.8e-11 72.8 142 36.6
Lsat_1_v5_gn_2_132020 Lactuca sativa HOM05D004189 ORTHO05D004092 4.8e-11 72.0 123 37.4
ClCG09G012920 Citrullus lanatus HOM05D004189 ORTHO05D004092 6.3e-11 71.6 159 36.5
Dinv28441 Davidia involucrata HOM05D004189 ORTHO05D004092 6.3e-11 71.6 175 36.0
THA.LOC104811978 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 8.2e-11 71.2 184 35.3
Peaxi162Scf00444g00847 Petunia axillaris HOM05D004189 ORTHO05D004092 1.1e-10 70.9 128 39.8
FAN03G0039 Fragaria x ananassa HOM05D013146 ORTHO05D004092 1.8e-10 70.1 165 37.6
FAN01G1221 Fragaria x ananassa HOM05D013146 ORTHO05D004092 2.4e-10 69.7 143 38.5
Nn6g33499 Nelumbo nucifera HOM05D004189 ORTHO05D004092 4.1e-10 68.9 135 39.3
FAN03G0716 Fragaria x ananassa HOM05D013146 ORTHO05D004092 5.3e-10 68.6 144 37.5
Cpa.g.sc107.53 Carica papaya HOM05D004189 ORTHO05D004092 9.1e-10 67.8 166 33.1
BraA03t14684Z Brassica rapa HOM05D004189 ORTHO05D004092 3.4e-09 65.9 164 34.1
CSS0002108 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 3.4e-09 65.9 122 39.3
CSS0007027 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 3.4e-09 65.9 122 39.3
CANSAT21G0725 Cannabis sativa HOM05D004189 ORTHO05D004092 3.4e-09 65.9 148 34.5
Ca_10770_v3 Cicer arietinum L. HOM05D004189 ORTHO05D004092 3.4e-09 65.9 149 34.9
ECA238G1803 Erigeron canadensis HOM05D004189 ORTHO05D004092 3.4e-09 65.9 119 35.3
Oeu056256.2 Olea europaea HOM05D004189 ORTHO05D004092 3.4e-09 65.9 137 35.0
HanXRQChr07g0207021 Helianthus annuus HOM05D004189 ORTHO05D004092 4.5e-09 65.5 124 37.1
A03p56110 Brassica napus HOM05D004189 ORTHO05D004092 7.7e-09 64.7 164 34.1
AT4G25580 Arabidopsis thaliana HOM05D004189 ORTHO05D004092 1.3e-08 63.9 181 33.1
Carub.0007s1540 Capsella rubella HOM05D004189 ORTHO05D004092 1.7e-08 63.5 185 31.9
MD07G1268800 Malus domestica HOM05D004189 ORTHO05D004092 1.7e-08 63.5 162 34.6
CANSAT21G0752 Cannabis sativa HOM05D004189 ORTHO05D004092 2.2e-08 63.2 148 33.8
DCAR_022326 Daucus carota HOM05D004189 ORTHO05D004092 2.9e-08 62.8 85 44.7
FvH4_7g29491 Fragaria vesca HOM05D013146 ORTHO05D004092 2.9e-08 62.8 163 36.2
BcaC06g32799 Brassica carinata HOM05D004189 ORTHO05D004092 3.8e-08 62.4 164 34.1
CsaV3_3G049950 Cucumis sativus L. HOM05D004189 ORTHO05D004092 3.8e-08 62.4 163 35.6
AL7G27520 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 6.5e-08 61.6 181 32.6
Thhalv10024860m.g Eutrema salsugineum HOM05D004189 ORTHO05D004092 6.5e-08 61.6 186 32.3
MELO3C003321.2 Cucumis melo HOM05D004189 ORTHO05D004092 8.5e-08 61.2 130 34.6
FAN06G1386 Fragaria x ananassa HOM05D013146 ORTHO05D004092 8.5e-08 61.2 163 35.6
RcHm_v2.0_Chr1g0377331 Rosa chinensis HOM05D013146 ORTHO05D004092 8.5e-08 61.2 88 47.7
C07p54440 Brassica napus HOM05D004189 ORTHO05D004092 1.1e-07 60.8 164 33.5
BolC7t45929H Brassica oleracea HOM05D004189 ORTHO05D004092 1.1e-07 60.8 164 33.5
Nitab4.5_0009681g0010 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.4e-07 60.5 152 34.2
Nitab4.5_0003242g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.9e-07 60.1 119 37.0
Sp7g23610 Schrenkiella parvula HOM05D004189 ORTHO05D004092 1.9e-07 60.1 172 32.0
FAN06G2021 Fragaria x ananassa HOM05D013146 ORTHO05D004092 2.5e-07 59.7 129 36.4
Nitab4.5_0002721g0060 Nicotiana tabacum HOM05D004189 ORTHO05D004092 2.5e-07 59.7 133 31.6
AL8G26690 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 3.2e-07 59.3 137 33.6
Migut.F01119 Erythranthe guttata HOM05D004189 ORTHO05D004092 3.2e-07 59.3 148 35.8
ATR0680G076 Amborella trichopoda HOM05D004189 ORTHO05D004092 4.2e-07 58.9 45 62.2
Sed0019460 Sechium edule HOM05D004189 ORTHO05D004092 7.2e-07 58.2 170 32.9
Sp6g14560 Schrenkiella parvula HOM05D004189 ORTHO05D004092 1.2e-06 57.4 65 47.7
CDE08G1026 Ceratophyllum demersum HOM05D004189 ORTHO05D004092 1.6e-06 57.0 35 71.4
Migut.F00339 Erythranthe guttata HOM05D004189 ORTHO05D004092 1.6e-06 57.0 123 35.0
MBI17_g21975_MAGBIO Magnolia biondii HOM05D004189 ORTHO05D004092 1.6e-06 57.0 130 32.3
Aa31LG7G12260 Aethionema arabicum HOM05D004189 ORTHO05D004092 2.1e-06 56.6 104 41.3
unitig_46.g18790 Utricularia gibba HOM05D004189 ORTHO05D004092 2.7e-06 56.2 45 64.4
CARHR233000 Cardamine hirsuta HOM05D004189 ORTHO05D004092 3.6e-06 55.8 144 30.6
Hund11746 Selenicereus undatus HOM05D004189 ORTHO05D004092 4.7e-06 55.5 134 31.3
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 4.7e-06 55.5 54 55.6
A02p11900 Brassica napus HOM05D004189 ORTHO05D004092 6.1e-06 55.1 177 29.9
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 6.1e-06 55.1 58 48.3


User provided reference genes

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