Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G186175 Glycine max HOM05D001226 ORTHO05D211749 2.4e-54 215.3 114 100.0
Glyma.U007800 Glycine max HOM05D001226 ORTHO05D212487 2.7e-45 185.3 97 100.0
Glyma.09G138000 Glycine max HOM05D001226 ORTHO05D001078 2.6e-16 89.0 101 55.4
TPR.G21307 Trifolium pratense HOM05D001226 ORTHO05D001078 4.3e-11 71.6 140 37.9
Phvul.004G114400 Phaseolus vulgaris HOM05D001226 ORTHO05D001078 5.6e-11 71.2 105 44.8
Glyma.20G159400 Glycine max HOM05D001226 ORTHO05D001078 2.1e-10 69.3 99 47.5
Lj5g0011608 Lotus japonicus HOM05D001226 ORTHO05D001078 2.4e-09 65.9 99 44.4
Psat6g197760 Pisum sativum HOM05D001226 ORTHO05D001078 5.3e-09 64.7 46 69.6
TPR.G23945 Trifolium pratense HOM05D001226 ORTHO05D001078 5.3e-09 64.7 46 69.6
MD01G1201900 Malus domestica HOM05D001226 ORTHO05D001078 6.9e-09 64.3 99 43.4
Psat6g197800 Pisum sativum HOM05D001226 ORTHO05D001078 6.9e-09 64.3 46 67.4
arahy.Tifrunner.gnm1.ann1.05NU8P Arachis hypogaea HOM05D001226 ORTHO05D001078 9.0e-09 63.9 46 67.4
arahy.Tifrunner.gnm1.ann1.KECW5Q Arachis hypogaea HOM05D001226 ORTHO05D001078 9.0e-09 63.9 46 67.4
arahy.Tifrunner.gnm1.ann1.Y30FFD Arachis hypogaea HOM05D001226 ORTHO05D001078 9.0e-09 63.9 46 67.4
Medtr6g452730 Medicago truncatula HOM05D001226 ORTHO05D001078 9.0e-09 63.9 87 44.8
VMungo0285G0001 Vigna mungo HOM05D001226 ORTHO05D001078 9.0e-09 63.9 110 41.8
Glyma.10G235000 Glycine max HOM05D001226 ORTHO05D001078 1.2e-08 63.5 45 71.1
Psat6g197680 Pisum sativum HOM05D001226 ORTHO05D001078 1.2e-08 63.5 46 67.4
Ca_10755_v3 Cicer arietinum L. HOM05D001226 ORTHO05D001078 1.5e-08 63.2 99 42.4
Haze_13679 Corylus avellana HOM05D001226 ORTHO05D001078 2.0e-08 62.8 99 42.4
Haze_13680 Corylus avellana HOM05D001226 ORTHO05D001078 2.0e-08 62.8 99 42.4
CiPaw.03G107500 Carya illinoinensis HOM05D001226 ORTHO05D001078 3.4e-08 62.0 99 42.4
Prupe.2G295300 Prunus persica HOM05D001226 ORTHO05D001078 3.4e-08 62.0 99 41.4
FvH4_7g29560 Fragaria vesca HOM05D001226 ORTHO05D001078 5.8e-08 61.2 99 41.4
FAN06G0317 Fragaria x ananassa HOM05D001226 ORTHO05D001078 5.8e-08 61.2 99 41.4
FAN06G1455 Fragaria x ananassa HOM05D001226 ORTHO05D001078 5.8e-08 61.2 99 41.4
Cfa022984 Carpinus fangiana HOM05D001226 ORTHO05D001078 7.6e-08 60.8 106 39.6
RcHm_v2.0_Chr1g0377551 Rosa chinensis HOM05D001226 ORTHO05D001078 7.6e-08 60.8 99 43.4
MD07G1270900 Malus domestica HOM05D001226 ORTHO05D001078 9.9e-08 60.5 46 65.2
Psat6g197840 Pisum sativum HOM05D001226 ORTHO05D001078 9.9e-08 60.5 46 65.2
CiPaw.03G107400 Carya illinoinensis HOM05D001226 ORTHO05D001078 1.3e-07 60.1 99 40.4
Medtr1g101120 Medicago truncatula HOM05D001226 ORTHO05D001078 1.3e-07 60.1 141 36.9
FAN01G1862 Fragaria x ananassa HOM05D001226 ORTHO05D001078 1.7e-07 59.7 46 65.2
FAN10G1273 Fragaria x ananassa HOM05D001226 ORTHO05D001078 1.7e-07 59.7 46 65.2
FAN10G1737 Fragaria x ananassa HOM05D001226 ORTHO05D001078 1.7e-07 59.7 46 65.2
Thecc.03G178100 Theobroma cacao HOM05D001226 ORTHO05D001078 1.7e-07 59.7 100 41.0
Duzib068G0195 Durio zibethinus HOM05D001226 ORTHO05D001078 2.2e-07 59.3 46 65.2
Duzib205G1283 Durio zibethinus HOM05D001226 ORTHO05D001078 3.8e-07 58.5 46 63.0
Gohir.A12G257100 Gossypium hirsutum HOM05D001226 ORTHO05D001078 4.9e-07 58.2 46 60.9
Gohir.D12G258400 Gossypium hirsutum HOM05D001226 ORTHO05D001078 4.9e-07 58.2 46 60.9
Gorai.008G276700 Gossypium raimondii HOM05D001226 ORTHO05D001078 4.9e-07 58.2 46 60.9
Psat6g197880 Pisum sativum HOM05D001226 ORTHO05D001078 4.9e-07 58.2 85 42.4
Potri.012G141800 Populus trichocarpa HOM05D001226 ORTHO05D001078 4.9e-07 58.2 94 39.4
Sabra15G0154300 Salix brachista HOM05D001226 ORTHO05D001078 4.9e-07 58.2 94 40.4
CANSAT21G1407 Cannabis sativa HOM05D001226 ORTHO05D001078 6.4e-07 57.8 46 63.0
CANSAT21G1888 Cannabis sativa HOM05D001226 ORTHO05D001078 6.4e-07 57.8 46 63.0
Lalb_Chr19g0130781 Lupinus albus HOM05D001226 ORTHO05D001078 6.4e-07 57.8 45 60.0
Potri.015G144800 Populus trichocarpa HOM05D001226 ORTHO05D001078 6.4e-07 57.8 94 40.4
Atru.chr1.443 Acer truncatum HOM05D001226 ORTHO05D001078 8.4e-07 57.4 57 56.1
QL09p013967 Quercus lobata HOM05D001226 ORTHO05D001078 8.4e-07 57.4 99 39.4
GSVIVG01028936001 Vitis vinifera HOM05D001226 ORTHO05D001078 8.4e-07 57.4 46 60.9
VMungo0464G1152 Vigna mungo HOM05D001226 ORTHO05D001078 1.1e-06 57.0 59 55.9
GSVIVG01028935001 Vitis vinifera HOM05D001226 ORTHO05D001078 1.1e-06 57.0 99 39.4
CiPaw.04G071600 Carya illinoinensis HOM05D001226 ORTHO05D001078 1.4e-06 56.6 100 41.0
COL.COLO4_14324 Corchorus olitorius HOM05D001226 ORTHO05D001078 1.4e-06 56.6 99 40.4
Sabra12G0106600 Salix brachista HOM05D001226 ORTHO05D001078 1.9e-06 56.2 94 38.3
Atru.chr1.444 Acer truncatum HOM05D001226 ORTHO05D001078 2.4e-06 55.8 47 63.8
Atru.chr1.446 Acer truncatum HOM05D001226 ORTHO05D001078 2.4e-06 55.8 47 63.8
Phvul.007G071100 Phaseolus vulgaris HOM05D001226 ORTHO05D001078 2.4e-06 55.8 110 37.3
QL03p015596 Quercus lobata HOM05D001226 ORTHO05D001078 2.4e-06 55.8 46 58.7
Gorai.N025100 Gossypium raimondii HOM05D001226 ORTHO05D001078 3.2e-06 55.5 46 58.7
Manes.06G148000 Manihot esculenta HOM05D001226 ORTHO05D001078 3.2e-06 55.5 46 58.7
CiPaw.03G107300 Carya illinoinensis HOM05D001226 ORTHO05D001078 4.2e-06 55.1 45 62.2
TWI39G0730 Tripterygium wilfordii HOM05D001226 ORTHO05D001078 4.2e-06 55.1 99 38.4
GSVIVG01028938001 Vitis vinifera HOM05D001226 ORTHO05D001078 5.5e-06 54.7 99 37.4
Oeu022594.1 Olea europaea HOM05D001226 ORTHO05D001078 7.1e-06 54.3 47 61.7
Eucgr.K00267 Eucalyptus grandis HOM05D001226 ORTHO05D001078 9.3e-06 53.9 45 55.6
Peaxi162Scf00444g00835 Petunia axillaris HOM05D001226 ORTHO05D001078 9.3e-06 53.9 46 52.2


User provided reference genes

Program Settings