Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 3.8e-116 421.4 196 100.0
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 1.7e-108 396.0 194 93.8
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 3.6e-106 388.3 194 91.8
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 1.2e-98 363.2 195 84.1
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 1.2e-98 363.2 195 84.1
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 4.0e-97 358.2 192 82.3
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 6.8e-97 357.5 191 83.8
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.3e-95 353.2 192 81.8
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 1.7e-95 352.8 193 81.3
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 4.8e-95 351.3 193 83.4
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 1.1e-94 350.1 191 81.7
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 7.0e-94 347.4 191 81.7
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 9.1e-94 347.1 191 81.2
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.7e-93 345.5 191 77.5
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.7e-93 345.5 191 77.5
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 2.7e-93 345.5 191 77.5
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 4.5e-93 344.7 193 77.7
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 5.9e-93 344.4 210 73.8
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 1.7e-92 342.8 193 77.2
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 2.9e-92 342.0 192 77.6
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 3.3e-91 338.6 200 77.0
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 7.2e-91 337.4 193 76.2
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 1.2e-90 336.7 195 78.5
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 2.1e-90 335.9 191 77.5
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 2.8e-90 335.5 191 78.0
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.6e-90 335.1 192 78.1
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 4.7e-90 334.7 193 78.8
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 1.8e-89 332.8 191 77.5
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.8e-89 332.8 189 78.8
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 3.0e-89 332.0 191 77.5
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.2e-88 330.1 195 76.9
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 1.5e-88 329.7 193 76.7
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 2.6e-88 328.9 189 76.7
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 4.4e-88 328.2 190 74.7
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 9.8e-88 327.0 189 77.2
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 9.8e-88 327.0 189 77.2
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 9.8e-88 327.0 191 74.9
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 1.3e-87 326.6 191 75.9
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 1.3e-87 326.6 191 76.4
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.7e-87 326.2 189 77.2
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 1.7e-87 326.2 191 75.4
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 2.8e-87 325.5 193 71.5
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 2.4e-86 322.4 193 72.5
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 5.9e-85 317.8 189 73.5
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 1.0e-84 317.0 191 71.7
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 2.3e-84 315.8 170 82.9
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 2.9e-84 315.5 227 64.8
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 5.0e-84 314.7 189 71.4
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 6.6e-84 314.3 191 71.2
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 4.3e-83 311.6 191 72.3
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 7.3e-83 310.8 204 68.1
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 7.3e-83 310.8 193 68.4
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 9.5e-83 310.5 191 73.3
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 2.0e-80 302.8 194 71.6
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 1.3e-79 300.1 191 70.2
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 1.6e-77 293.1 238 61.3
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 7.8e-77 290.8 190 68.4
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.3e-76 290.0 193 66.3
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 2.8e-74 282.3 192 68.8
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 2.8e-74 282.3 192 68.8
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 2.8e-74 282.3 192 68.8
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 2.0e-72 276.2 261 54.0
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 7.5e-72 274.2 144 84.7
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 1.7e-71 273.1 192 67.7
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 2.9e-71 272.3 193 65.8
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 1.0e-68 263.8 167 67.1
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 1.6e-66 256.5 155 71.6
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 8.9e-65 250.8 167 68.3
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 9.9e-56 220.7 198 51.0
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 7.1e-54 214.5 201 50.2
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 3.9e-52 208.8 197 50.8
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 7.3e-51 204.5 124 71.0
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 3.0e-44 182.6 133 62.4
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 4.8e-42 175.3 108 71.3
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 3.1e-41 172.6 119 66.4
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 2.6e-40 169.5 105 72.4
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 3.4e-32 142.5 210 38.1
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.5e-29 132.5 70 82.9
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 8.7e-28 127.9 244 32.4
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.1e-27 127.5 108 54.6
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 1.8e-25 120.2 70 68.6
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 1.8e-25 120.2 70 68.6
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 5.3e-25 118.6 85 62.4
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 1.2e-24 117.5 69 71.0
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 4.9e-23 112.1 196 34.7
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.5e-23 111.7 68 77.9
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 8.4e-23 111.3 68 76.5
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.2e-22 109.4 68 75.0
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 9.3e-22 107.8 68 75.0
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 6.0e-21 105.1 54 90.7
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 4.3e-19 99.0 168 31.0
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.8e-18 95.5 89 56.2
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.4e-17 93.2 49 79.6
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 6.1e-13 78.6 49 65.3
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 1.1e-11 74.3 56 62.5


User provided reference genes

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